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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13824_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_E_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:4.52 TPM:3.81
ORF EntryO_TrvaMG1801_complete:A_TrvaMG_comp13824_c0_seq1
Sequence
(Nucleotide)
ATTAATTGTAAATAACATTTTTATTCCATCCAAACGAAGTAGAGTGCTTACATCAAAACC
ATGGTATACCTACATTTTCCCTCGAATTTAACCGAGGAAGAGTTGATGTTACAAGCAAAG
TATCAGAAACTTAAGAAGAAAAAGAAAGCTTTGCAAGCTCTGAAAGCGCCGAAACCAGAA
CCGGAAAAGCCGATTTTACCGAAACGACCAACTGAGGCTAGAGACGCAAGAGAAATAGCT
CGTAAACTACTGAAAAGTGGAGCTATTCAAGCTATCAAAAGTCCGCCAACTCAGCCTCAG
AATACTACTTTCAAGAAACCGCGTGCCGGTCGAGAAAGAAAGCTAAGTGGATCAACGGGT
GCACCCGGAGGTGTTGCATCGTATCAGCCGTTCAGTGCTTCACAAGAACCACCACCACCT
GAAGAGAAAACAACTCCTCGAGTTAAATATCTTTATGATTCATTTGTGACTGCTAGAGAA
AAAGATGATAAAGGTTCACGGACTCCTAATCCTGGTGGTAGTACTCCTGTTCAAGCAGAC
GGACGCAGCTGCACTTTACAAATAATTGGACAAAGAATATCTGAAGAAAATTTAAGAAGG
CGCCTTGCCACTTTTGAGCCTTTTGTATTCTTACCAAAAGATGAAAAGGCTTTCTTAACA
TTCGATAGTCCCGACATCGCATCCCATGCTCTATCAGCACTCGAAGGTAACGAGGAAGGC
TGGAGGATAACAATAGCAAGAAGACCTCCTCCGCAACAAGGGAGTTGGAGTCCAGCCGCT
TCACCGAGAAACCCACAACCACCTCCTAAGGACTTGAAACGAACATTGTTGACTTATGAT
GATATTTTTGATTAAAGATTATAGAAAAATTTCAAA
(876 bp)

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