SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13774_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pescadillo_homolog_[Bombyx_mori]
Ontology
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
Transcript
Level		FPKM:26.39 TPM:22.21
ORF EntryO_TrvaMG1772_complete:A_TrvaMG_comp13774_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTATTTTACATATTTAATTCTATTTATTAAATAAACATCAAGCAGTAGCAG
CTTCAAGTGCTTGGATTCTTTGTTTTCGTTTATCTGCTTTTTTATCTTCCTTGACTTTTT
CGTCATGAAGACGTCGTTTCTTCCTTAGAAGCCAAATTTCCTTTTTACGTTTCTCTTGGC
CTGCTTTCATGCTCTTGTAGAGATTTCTGTGCTTCTTACGGACAAGTTTTTCACGTAATC
TGAAGGCCTGTTTATCTTCAATCTCTTTCTGATATGGGTGATCCTTGTGTGTTACACCAG
CTGTTACAGCCATAGCCTTTTTCTTTTCTTTAGCCAGTTTCTTTTTCTCTGGATCCAAAT
CGTCTTCATTTTCATCTTCATTGTCAGTGGAGTCCTCTTCAACTTCCTGTTGATATTGTT
TAGTGATGGCCCCTTCTTCATCACTGTCTGAATCAGCCTCACTTTCCTCCTTGTCCTCAT
CACTTGCCTCTTCTATATCAGTGCCTGAGCCATCATCATCTAGAGGCTTGAAATTAGGAT
CATTAAGTTGCTTCTCCTCTGGTGGTATGTATACTTGATCTTTAGTGGCATCAATGAATG
GTGACAAATGTGGCGGCAGTACAGCACCCATCAAGTATTTGTTAATCGGCAGCAGTGTTC
TGGCATTAACACTGTCAAAAACCCATTGAGGCTGCACATAGTACCGTGAGAGATACTGTT
TCTCCATACTTGGTCTGTCTACTATTTGATATGCAATCGATTCATCTGTTTCATCAAATG
TGGCACCAACGAAATGATCTTTATCCCAAGAGCATTCTCCACCGAAACAACGAATTACGA
ACACTAATGGCTCCCTAGGTACCTCTCTGTTTATATAGAACTTCAGTCCCTTGAACAAAG
TTTTTAACTTTTTAATTTTTTCTGCTTCAAGTTTTGCCTGTTCTAATTTCTGGGGATCAT
TATCATCTGTTGGAAATACATCTATTTCCGGCAATTCTTCAACTTCATTGGCTCCTTCTA
TTTTGGCTGGAGAAATGTTCATGGCAGCAATTCTCTCTGCCACATATGAATGTTCATCAA
TAAGATCCTTGTCCTTATCTGATGTGAATCCTATTGGGAGTTTAGGAGGATAGACCAAAT
TAAGGGAATGGTAGAGCTTGAAGTTTACAAAGCCAAGCATCATGGTGTAGAATTCAACAA
AGGTAGACATTATTTTGAAGTCAACTTCATCTTTGCTTTGAGGCTGGAATGAGAAATGAT
GTGGCACAATCCATGTGATTGTTTGTCCTTCAAATTCAACTTGGTAATAGAAACCTTTGA
CTGACACAAATACTTTACGTAGGGCTTTTGCAGCAATTACAGCATGCATGAACTCAACTG
TGAGTCTTCTGCACAAAAATGACTGATCTCTCGGGACTTTCTTCAATGAAGGAAATGTGC
TAAACAAGAAGCACAGTGTGAGGCAATCGTCCAAATCTCTCAATGCGTCTACAAAAGTAG
GATATCTTTCCTTGACTATGTGGTCAATGTTTATGCCTGGATAGTCCCTAAGGAACTTTC
TCATCTTGCCGTAGTCTCGCTGTGCTCTTGCACGACGTATTTTTTGTTGATAGACCTTTA
AATCTCTGAGTTTCCATATTATTGGTTCGTGTAGTAAGAACTTTATGTCTTTAGTGTGAT
AAAGAGTTTTTATTCCACCTGCTCCTTTTTGAGCCCTCTTCCGGTTTCTAGGTTCTCTGG
GATATATTCCTTTTAATATGCAGATACGTCTGAAGTCTTTCAGGGACAGTTGGAGTTTTT
TGAGCGCCGCCTTTCTAGTCATAAACTGCGCTCCTTCTCCCGACGAATACTTCTTCTTTT
TCTTTGACACCATTGTGATAATAAACCTTTTTTAAATATCAGTTACACAATAAATGTATT
CAATTTTCAATTTAATTAATTAATTTACTTTTTTGTGATTTTTATAAAGTCGCATTTTGG
TCG
(1983 bp)

- SilkBase 1999-2023 -