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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13602_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0070987 P error-free translesion synthesis
Transcript
Level		FPKM:16.67 TPM:14.04
ORF EntryO_TrvaMG1619_complete:A_TrvaMG_comp13602_c0_seq1
Sequence
(Nucleotide)
GTTTGCGTCTTTGAATAATAAATTTTTCAATATTTAAATTTTGTAGCTAATATCTGCAGT
TCTAATTTATTCCCAATTCATCCCATTTCCGCATATTCAGTTTGGAAAAGACCATTGAAA
ATGTCGAAAGAACAAACAGAATGTGTTAAGGACGAAAGTTCTGTAGAACAAAACGGAGAA
AAGGAGAAAGCAGGTTGTGCTCACTACCAACGACGAGCGAAGTTTGTGACCCCATGCTGC
AATAAAGTGTACATATGTAGATACTGTCACGATGAGAACGAACAGCACTACTTCAATAGG
AAGACTGTCACGGAGCTGATTTGTACTGAGTGTGATACTAGACAGAAAGTACAACCGGAA
TGTCAGAACTGTGGTGTACGATTCGGAAAGTACACATGTCTTATCTGCAATCTATTTGAC
GACGAAGATAAGAAACAGTATCATTGCGATGGATGCGGCATATGTCGCGTCGGCGGCCGG
GATCGGTTCTTCCATTGTGAACGATGCAATATGTGTCTGCCTGTGCAGTTACAGAGGGTC
GGACATAGGTGCGTAGAAAATGTGTCCCGTTCGAACTGCCCTGTGTGCCTCGAGGACATC
CACACGTCGCGCATCCCGTGCCACATCCCGGACTGCGGCCACCTGCTGCACCGGCCCTGC
TTCGAGCAACTCTTACACTCCGGACACTACGCCTGCCCCACGTGCCAGACTAGCATGATT
GACATGTCCAACTTGTGGAACTACCTAGATTCAGAAGTAGCGGCCACACCGATGCCTCCT
GAATACGCGGATTACAAAGCTACAATACTCTGCAAAGATTGTCATAAGCTTTCAACGGTA
AAGTTTCACGTCGTGGGCTTGAAATGTCAACATTGCGGAGCCTACAACACTTGTCAAACG
AATGGATTCCATAAAGAAAGCACCGCCGCAGACGCAACGGACGCAGCAAGCTCATCACCA
TCATCAACGTCATCAACATCGTCAACATCATCAACGCCGTCAACGTCTCAACCGTCCGCA
GATCACGAGCTACCAACAGCCAATCCGTTGGATGAACCGCCTCAAGCTTGACTGACCTCA
ACATATAAAATGTTATATTTTGACGTAAGAGTGAATTATATTTTAAAATCGTATTGGTAA
TGAGAATATTATAACATATTTTTTGAATCGCGCTTTTCAACACATTTATTTAGTTTAAAT
AAAAAAAGGTTCCGTTACAGGTTACGAAAACTAGGTTGTTATTTAACTTATTAAAGAACT
TATTGAATTGCCAAATTACAACTGCACATAGCATTTGGTCCTCATCTGCACTGAAGTTCG
CGTTGACGATTGAAGTTGCATTTAATGCTATTGGAAAACATACAAGACCGTATTTTGGCA
GCTGGTAAATTTGGATATTATAAAAAAAAATCTATTAAAATCCAACGTAACTACCTTAAG
ACACACTGTAGTTGCCAAAGGGCTATATACAGGGTGATTTACTGTAATCGAGTCTGCTTC
TGAAGAACCATCTACATTCAATTATAGTGTAAATTTTGCGCTCGTCGTTCTATGAGTCAG
TCAGAGCGCACCGCTACTATTCATTATTTTTTGTAGCCAACCAGTGAATTTTGTACGCTT
CAAAAGGCGGACGTTGAACACAGAGAAACAACATTGGCACACACAATTGTGTGATAGTAT
TTAGTATTTTTACTTATCTTTACGACTTGTGAAAAATAAATGTTATTTTTTTACACTTAC
CCTGTATAAAAGTTGTTTATTTTGTAACATGCTAAATTGGCTCAATTTCTTTAAATGTTT
AACGAGTAACCATAATGTTTTGAATTGTAGCAACCCACTTAATATCTATAATTTTTTGCT
TATACCAATAGTAGTAATAGTGAAAATAAATTTGAATATATTCCTAATTTTGTGATAGTG
AGATTATTTGGAGACTTGAAATGAAATTGATTTGATCTGCATAATGGTTGAACGGCATTT
AATACTAAATATTTCGAATTATTTTTTCAAATAAAAACACTAAATTTTCAAGAAAAAGTA
CATAAAAAGTACAATATTATTACACTAAAAAAGATAAGATGGACTGAGAATTGACATTCG
CTGTTGTACAAAATATATGAATTCTGGATAATGTTTTTTTAGTATTAAAATAAAACCTTA
TTTTAAGAATACCTGCAAATTGTAATAATATTCCTAAATTGAAATAGAATAATGTGCGTA
AGATATTTATTTTGTATAAAATCGCTTTGTAAAATGATTAAGCTTATAGTTTTATTTTGT
TACATTTGTTGTAGATCTACATTACTTTGTGTAAAGTGGAAATAAAATATTGCAATCTTA
AAAAAAAA
(2348 bp)

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