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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13538_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_cortactin_[Danaus_plexippus]
Ontology
GO:0001726 C ruffle
GO:0002102 C podosome
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030516 P regulation of axon extension
GO:0030838 P positive regulation of actin filament polymerization
GO:0030863 C cortical cytoskeleton
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0048041 P focal adhesion assembly
GO:0048812 P neuron projection morphogenesis
GO:0048870 P cell motility
GO:0097581 P lamellipodium organization
Transcript
Level		FPKM:24.01 TPM:20.21
ORF EntryO_TrvaMG1578_complete:A_TrvaMG_comp13538_c0_seq1
Sequence
(Nucleotide)
CGGTCATTAAAATCGATAATATATCTATACAATCGATTAAATTAAACTAAGAAATAAAAC
TAAGTCAAAAGCTTTATAAAAGTCTATTAATAACATAATCGATTTTCATTTATGTCAATC
GAATTATATAAAATCGATTATGTTGATTTTTTTCTTCTGTATCGATCAAACGTAAAATCA
TTTCGACTTTTTTAATCGATAAACGATTTTGAAGGAACATTGTGTTATCGATTTTTGGCA
ACTTTTAAGGTTTGCAATAAAATAGAGTTTATAATATGGATATTTAACTTAAAAAAAACA
TTTTTTAATGTCATAAGTCAGTTCATAAACTTTCAATTGTTCAATTTTGTGGTTCTTTAT
TTAACCTTAAAATATTGTTTTTTTTTTAAATAATGACAAACTCAATACTAATTTAATTAA
AAATCTGAAAAAAACTTTCAATTGTAAGATTACATCGTTGCAACAATTACCCCTTCATTC
GTACAGAATTTTAATTTTATGCTCAACGGCTACCACATAAGGTTCAAAATGCTACAATGC
TTATCAAGTTTTTTGACATTGTATTTTGAGTCTTATGTAGTAGACATTAAGTATAAAAAT
TGATTGACTCAAAATTCCATGGGGCTTAGTATAATCTTTAATAACAAGGAATGTATTTGT
TTTAATATATTATAAAACTATTTATTTATCTTGTAATTGTACGTAATTAGCCGGGAAGAG
ACCGTACGCGCCTTTGCAGAGACCTTGCCACCATCCTTCGTCGATCATGACGATGTTAGT
GATGACGTCATCGGGGTCGAAGGATATCTCGTCGGGCGCGGCGGCGGTGTAGTCGTAGAG
CGCTCGTGCGGTGTACCCGTCCTCGTCGTCGGCGGGCTCGTCCTCGCCCTCCCAGCCCAC
CGGGGACACCACTATGGTGGGCTGACGGCTCATCTCTTCTTTTCCTTCCTTAGAATCTCC
AACCAAAGTGACATCCGGTAGATTCTTGACTTCCGCTTCCTCTCTCACACTCTCTTGTCT
CTCGCTGTCTCTTAACTCTTCTTTTACACTCTCCTGTTCTTGTGGAGTCACTTTGACAGG
TTCTACTTTGACAGGTTCCACTTTGACAGGTTCAACTTTAGCCTGTTCTATATGTGTATC
CGTGTGTTTGTCAAGTTGTGCGTTTGCTTGTGTGGGTGGTTCAGGGGAGTCCGGTTTCTT
GGCAATCCTTTCTTTTTCCTTTTGCGATATGTCCTTGTCAATTTTCTCCCTCTGTTGTCG
GATTCTTTGAACTGACTGCAACGTTTCCTGTTCCTGTTCCTTGGCCATGTTCTCGAACCT
GTCCCTGATGGAGGAAGGCTTGGCTCCTCCTATATCAGGTTTGTGCTTGGTGTAGTTGGT
GCCGACTTTCTCTGGAACCCCGAAGGAGTGAGCCGACTTGTCCACGCGGTCGGTTTGAAC
GCCGAATTTACCGCCGAAACCCTTTTTGTGATCAACTTGACTAGCGTGTGCAGGCGTTTT
CTCCTGATGATCCCAGCCCACGGCCGAAGCGTCCTGTCTGTCTGTTTGTACGCCGAATTT
TCCACCGAAACCGACTACGTAATCTCTCTGCGAGTGATGATGTTGCGCGTCCTCCTTGTG
GTCCCAGCCCACGGCGGAGGCGTCCTGTCTGTCGGCCTGCACGCCGTACTTGCCGCCGAA
CCCGACCGCGTAGTCCTTCTGAGACGAGTGCTTCTCTACTTGCTCTTTGTGCTCCCAGCC
CGCTGCACTCTTATCAACTCTATCAGTTTGAACGCCGAACTTCCCTCCGAAGCCCTGCGC
GTAGTCAGTCTGCGACACGTGCTTCTCGACGTTAGCGACGTAGTCGTGTCCCACGGCAGA
CTTGTCCATGCGGTCGGCTTGCACTCCGTACTTACCGCCGAATCCTTGAGCATAGTCCTT
CTGTGAGACATGTTTCTCAGTTTTTCCTACATAGTCATGACCCACTGCTGATTTGTCCAT
GCGGTCAGCTTGTACACCAAATTTGCCACCATATCCAAATGATGGCTTTGGTCCAGCTTC
ATATTGTTTTTTCTTTGATAATTTGTCAGCTTCCAACACTTCTTCACGTAATTTCGCCAT
GTCAATAGCCTCAACATTCCTCCCGGCCGGTCCCCATCTCTGTTCCTGTTCATCCACATC
ATTCACATAGTCGGGATCCGTCTCCCAATCATCAGCCTCTGCTGGCTCCGGAGCCGTTAC
ATTTGTTGCGGCCTTCCACATCTTAAGGTTTCCTTAAACCGGTTGGGGAAAATACGAATT
AAAAATACACTTTCACTTTTAACACTTACATGCGTACTTAAACTTGTAAATAACACTGTA
ATATTTCGCTAATTACGGAACATTTTTACGTTAGAATGAATTTCCTTAACTTATTTTTAA
AATAAAACAAATCACACGCAAAAACTGGGCGAATTTTTCAGTTTTCGCGATGTG
(2454 bp)

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