SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13492_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		transcription_initiation_factor_IIA_gamma_chain_[Bombyx_mori]
Ontology
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:28.27 TPM:23.80
ORF EntryO_TrvaMG1538_complete:A_TrvaMG_comp13492_c0_seq1
Sequence
(Nucleotide)
GCAGATTTGACTTTCCGCTTTCCAGTTTTACACTGTTTTGTGTTTCGTTATTTTAGTGCG
ATTTCCCTGCAATTATTGCTAAAAATTGATCTTAATAAAGCGTATAAAGTATAAATTTAA
ACAGTAATGTCATACCAATTGTATAGAAATACCACCATTGGTAATACACTTCAAGAAAGC
TTAGACGAATTGATTCAGTATGGACAAATAACACCTGCTTTAGCAGTGAAAGTCTTGCTG
CAGTTCGACAAGTCCATAAATCAAGCTTTATCCAACAGGGTGAAGTCTAGGTTAACATTT
AAAGCAGGAAAACTTAATACATATAGGTTTTGTGATAATGTATGGACTTTTATGTTGAAT
GACGTCGAGTTTAGAGAAGTACAAGAATTGGCCAAAGTGGAGAAAGTTAAAATAGTAGCC
TGTGATGGTAAAAATGTCGACGACCGCAGGTAACCTCCGTGAAACTGATTATTAGGATAA
AATTTACTACGAACTGAAGAAATCTGAATTTCATTAAAATGTTGTATGGTGTTGTATTTG
GTTTTTGTCATAATTGGGATCTAATTATTAAATAAATGTAAGTGGCATTTATTGTTAAAA
(600 bp)

- SilkBase 1999-2023 -