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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13447_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spectrin_beta_chain_isoform_X11_[Plutella_xylostella]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:81.51 TPM:68.62
ORF EntryO_TrvaMG1478_complete:A_TrvaMG_comp13447_c0_seq1
Sequence
(Nucleotide)
GGTCTTTCGTTTCGCTCGATGCCGTGTGTTCGTACTCGCATTCACGGATGATATTACAAC
TTGTTTTTATAAAAATAACGGCTACATAAAAGTTTTAGGAAAAAAGTGAACTGTGTTATG
TTAAAAGACTGTTCTGGGAGTGCAAGTGGCGTGGGTTCGTGTTTATTACAGTTGACCGCG
AAGCCCGTAGTGTATTTTGTGTGCTGACGAATTCTATGTACTTGTCTGTGCTGTAATAGC
ACACCTTGGACTCGCAGGAGAAGAGTTTCGAGCGTGGCGTGGTAAGGCTGTAGTTGGTCG
CGATGACGACCGACATATCGGTGTCCCGATGGGACCCGTCCGTCGGCCACGGCCAGGAGA
TCATTGATGAAATCGAGTACGATGGCGGAAACTCATCGTCGAGACTATTCGAACGATCGC
GCATTAAAGCGCTTGCAGACGAACGAGAGAGCGTGCAAAAGAAGACTTTTCAGAAATGGG
TGAACTCCCATTTAGTCCGCGTCGGGTGCCGTATCGGGGACCTGTACGTGGACATGAGAG
ACGGAAAGATGCTGATCAGACTACTTGAGGTGTTGTCTGGAGAAAGATTGCCTCGTCCAA
CGAAAGGTAAAATGCGTATCCATTGCTTGGAGAATGTAGACAAGGCCCTTCAGTTCTTGC
GCGAACAGAGAGTACACCTCGAGAACATGGGATCCCATGACATCGTCGACGGAAACCCTA
GGCTGAACCTTGGTCTTATCTGGACCATTATCCTGCGTTTCCAGATCCAAGACATCACAA
TCGAAGAGACCGACAACAAAGAAACGAAATCAGCGAAGGACGCTTTGCTATTATGGTGTC
AAATGAAGACAGCTGGTTACAACAATGTAAATGTTCGTAACTTCACGACATCTTGGCGTG
ATGGTTTAGCGTTCAATGCTATCATTCATAAGCACAGACCAGACCTGATACAGTTCGAGA
AACTGCACCGTAGCAACCCGATACATAATCTGAACAATGCATTCAATGTTGCTGAAGAAA
AACTTGGACTCACTAAACTGCTTGATGCTGAAGACATCGCGGTGGACCATCCCGATGAGA
AGTCGATCATCACGTACGTGGTGACGTACTACCACTACTTCAGCAAGATGAAGCAGGAGA
CGGTGCAGGGCAAGAGGATCGGCAAGGTGGTCGGCATCGCCATGGAGAACGACAAGATGG
TACAGGAGTACGAATCGCTTACCAGCGATCTCCTGCAATGGATCGAGCGTACAATCGAAG
CTCTCGGTGACAGAACATTCGCGAACTCACTGGAGGGAGTGCGCCAACAGCTCATCCAGT
TCGCTAACTATCGTACCGTCGAGAAACCGCCTAAATTCGTCGAGAAGGGTAACCTCGAAG
TGCTCCTGTTCACGCTGCAGTCCCGCATGCGCGCCGCCAACCAGCGCCCCTACGTGCCGC
GCGAGGGCCGCATGATACACGACATCAACCGCGCCTGGGAGACGCTCGAGAAGGCCGAGC
ACGAGCGGGAACTGGCGCTCAGGGAGGAGCTCATCAGGCAGGAGAAGCTTGAACAACTTG
CTGCTAGGTTCAACCGTAAAGCTCAGATGCGTGAGACATGGCTATCAGAGAACCAACGTC
TAGTGAGCCAGGACAACTTCGGTTTCGACCTGGCCGCCGTGGAGGCCGCCGCCAAGAAAC
ACGAGGCCATCGAAACTGATATATTCGCGTACGAAGAACGAGTGCAAGCCGTCGTAGCTG
TGTGCTCTGAACTGCAGGCCGAGAGGTACCACGACATCGAGCGTGTGTGCGCGCGCCGCG
ACAACGTGCTGCGTCTGTGGGCCTACCTGCTCGAACTGCTGCGAGCGCGCAGAGCACGAC
TCGAGCTGTCACTGCAGCTGCAACAGAACTTCCAGGAAATGCTATACATCCTGGACTCTA
TGGAGGAGATCAAGATGCGTCTCTTGACAGATGACTATGGCAAACATCTCATGGGTGTCG
AAGATCTGCTACAAAAGCACGCCCTGGTCGAAGCCGACATCAACGTTCTTGGAGAACGTG
TCAAGGTGGTAGTGGGCCAGTCTCAGCGTTTCCTGGAGGCGGAGGGCGGCGCGTACCGGC
CGTGCGACCCCGCCGTCACCGTGGACCGCATACAGCAGCTCGAGAACGCGTACGCTGAGC
TCGTGCATCTCGCCGTCGAACGCAGAAAGCGTCTGGAGGACAGCCGTAAGTTGTGGCAGT
TCTACTGGGACATGGCCGACGAAGAGAACTGGATCAAGGAGAAGGAACAGATTGTCTCCG
TTGATGACATCGGACATGATCTCACTACTGTGTACCTGTTGATATCGAAGCACAAGGCAC
TGGAAGCCGACGTATTGGCGCATGAACCGCAGCTCATGAGCGTGGCCGCTGTGGGAGACG
AACTCATCTCGCAGGGACACTTCGGAGCTGACAGGATTCAAGAGCGTCTCCGCGACATCC
TGTCCCAATGGAACCATCTCCTGGACCTGGTATCTCTGCGTAAGAGTCGCCTGGACGCGG
CGGTGCGCTACCATCAACTGTTCGCTGACGCTGACGACATCGACAATTGGATGCTGGACA
CGCTCAGATTGGTTTCATCGGAAGATACTGGTGTTGACGAGGCTCAAGTACAGAGTCTAC
TGAAGAAACACAAGGACGTCACTGATGAACTCAAGAACTACGCCAATGTTATTCAACAAC
TTAAACAACAGGCTCAAGAACTAAGTCCGGAAGATGCGAACAGCGGTGAAGTACGCGACC
GCCTGGCCGCTATCGACGCTCGTCACGGGGAACTGGCTGAGTTGGCCCGTCTCCGCAAAC
AACGGCTGTTGGACGCCTTGTCTCTCTTCAAACTGCTCGCCGAGGCGGACGCGGCCGACC
AGTGGATCGCGGAGAAACATCGCATGCTGGATACTATGCTGCCGCCTAATGATATCGATG
ATGTTGAGATTATGAAGCATAGATACGACGGTTTCGACAAGGAGATGAACGCGAACGCGT
CCCGCGTGGCCGTGGTGAACCAGCTGGCGCGACAACTCGTGCACGTGGAGCATCCGCAGG
CGCCGCGCATACAGGACCGACAACAACAACTCAACCAGGCCTGGAGCGCGCTCAGGGAAA
AGGCCGAAGCTAAGAAGGACGAACTCAAATCTGCGCAAGGAGTACAGACATTCCACATTG
AGTGTCGCGAGACTGTCTCCTGGATTGAAGACAAGAAACGCATACTGCAACAAACTGACG
ACCTTGAAATGGATCTTAACGGTGTAATGACTCTCCAACGTCGTCTATCGGGCATGGAGC
GCGACCTGGCCGCCATACAGGCTCGCATCTCGTCGCTGGAGAGCGAGGCCAGCGCCATCG
AACACGACCATCCCGAGGAGGCGCAGCTCATCCGGGAACGAGTCGAGCAGATCACGCACA
ACTGGGACCAACTCACGCATATGCTGAAGGAACGCGACTCGAAACTAGAAGAGGCCGGCG
ACCTGCACCGCTTCTTGCGTTCCGTCGATCACTTCCAAGCTTGGCTCACCAAGACACAAA
CAGATGTCGCTTCAGAAGATATCCCATCAAGTCTGCCCGAGGCTGAGAAACTCCTATCCC
AGCATCAAACCATCAAGGAAGAGATAGATAACTACAAGGACGAGTACGCTAAGATGATGG
AATTCGGAGAAAAGATTACTGCTGAGCCGTCTAGCCAAGATGACCCTCAGTACATGTTCC
TCCGCGAGCGTCTGAAGGCGCTGGGCGAGGGCTGGGCCGAGCTCCAGCAGATGTGGGAGA
ACAGGCAGCACCTCCTCGCGCAGAGCCTCGAGCTGCAGCTGCTGCAGAGGGACGCGCGAC
AGGCTGAGGTGCTACTGGCGCACCAGGAACACAAGTTAGCGAAGACTGAGCCACCAACCA
ACTTAGAACAAGCCGAAAACTTGATCAAGGAACATGAGGCGTTCCTTACTACAATGGAAG
CTAACGACGATAAGATCAACTCGGTCGTGCAGTTTGCCAACCGACTCGTCGAGGAGAGAC
ACTTTGACGCAGATAAGATACAACGCAAAGCTGAAAATATCGAGGCGCGCCGTAACGCCA
ACCGCGAGAAGGCACTCAACCTCATGGAGAAACTGCAGGATCAACTGCAGCTACATCAAT
TCCTGCAGGACTGCGACGAGCTCGGCGAGTGGGTGCAGGAGAAGAACGTCACCGCGCAGG
ACGACACCTACCGCTCCGCCAAGACCATACACTCCAAGTGGACGCGCCACCAGGCTTTCG
AAGCAGAAATCGCCGCCAACAAGGAAAGACTCTTCGCCGTACAGAACGCCGCCGAGGAGC
TCATGAAGCAAAAGCCAGAATTCGTCGAAGTCATCTCGCCTAAAATGTCCGAGCTTCAAG
ACCAATTCGAAAACCTACAAACGACCACGAAAGAGAAGGGCGAGCGCCTGTTCGACGCGA
ACAGGGAAGTCCTGCTCCACCAGACCTGCGACGACATCGACTCGTGGATGAACGAACTCG
AGAAGCAGATCCAGAGCACCGACACCGGCACCGATCTGGCCTCCGTCAACATTCTCATGC
AGAAGCAACAGATGATAGAGACCCAGATGGCAGTCAAGGCGAAGCAGGTCACCGAGCTGG
AGACGCAGGCCGAGTATCTGCAGAAGACCGTCCCCGACAAGATGGAGGAGATCAAGGAGA
AGAAGAAGGTCGTCGAGAACCGGTTCGAGCAGCTCAAGGCTCCGCTGCTGGAAAGACAGC
GCCACCTCGCCAAGAAGAAGGAGGCCTTCCAGTTCCGGCGCGACGTCGAGGATGAGAAGC
TGTGGGTGGAGGAGAAGATGCCGCTCGCGACCAGCACCGACTACGGCAACTCGCTGTTCA
ACGTGCAGATGTTGCAGAAGAAGACGCAGTCGCTCAAGACGGAGACCGACAACCACGAGC
CCAGGATCCTCACCGTCATTTCCAATGGACAGAAGCTCATCGACGAGGGACACGAGAGTT
CGCCCGAGTACCAACAGCTTATCGATGAACTTACTGCCAGGTGGCGAGAACTTAAAGATG
CCATCGAAGAACGCAAGAACAACCTGTCCCAATGGGAGAAAGCCCACCAGTACCTGTTCG
ACGCGAACGAAGCGGAGGCCTGGATGAGCGAACAGGAACTCTACATGATGGTCGAGGACC
GCGGCAAGGATGAGATCTCCGCTCAGAACCTCATGAAGAAACACGAGATACTTGAACAGG
CTGTTGATGACTACGCGCAGACTATACGCCAGCTCGGAGAGACTGTTAGACAACTCACTG
CTGAGGAACACGCACTCAGCGAACAAATATCAGTGAAGCAATCGCAAGTCGACAAACTGT
ACGCCGGCCTCAAGGACTTGGCGGGCGAGAGGCGAGCGAAACTGGACGAGGCCTTGAGAC
TGTTCCAATTGTCTCGCGAAGTCGATGACCTGGAACAATGGATCACAGAGAGGGAGCTCG
TGGCCAGCAGCCAGGAGCTTGGACAGGACTATGATCATGTTACATTACTATGGGAGCGTT
TCAAGGAATTCGCCCGCGAGACCCAAGCGGTAGGTTCTGAACGGGTCGGCACGGCTGAAC
GCATCGCCGACCAGATGATCGCAATGGGACACTCCGACAACGCGACCATCGCGCAATGGA
AGGAGGGACTCAAGGAAACCTGGCAGGATCTGCTTGAACTTATCGAGACTAGAACACAGA
TGTTGGCTGCGTCCCGCGAGCTACACAAGTACTTCCACGACTGCAAGGACACGCTACAGC
GCGTCAACGAGCGAGCGCGCGGCGTGTCCGACGACCTCGGCCGCGACGCCATCAGCGTGT
CCGCGCTGCAGAGGAAGCACCACAACTTCATGCAGGACCTCACCACGCTGCAGCAGCAGG
TGGAATCGATAAAGAGCGAGTGCTCCCGACTGGGCGCGTCGTACGCAGGCGAGAAGGCGG
CGGAGATCACGCGGCGCGAGCGCGAGGTGGCGGACGCGTGGGCCGCGCTGCAGGCCGCGT
GCCGCGCACGACGGGCCAAGCTCGAGGACGCGGACAGGCTGTACCGCTTCCTCAGCCAGG
TGCGCACGCTCACGCTCTGGATGGACGACGTCGTCAGGCAGATGAACACGGGAGAGAAAC
CGAGAGATGTAAGCGGCGTGGAACTATTGATGAACAACCACCAATCCCTGAAAGCGGAGA
TCGACACCCGCGAGGACAACTTCTCAGCTTGCATATCACTGGGCAAGGAGCTACTGGCAC
GACAACACTACGCGTCCGCCGACATCAAGGAGAAGCTGTTACAGCTCACCAACCAGAGGA
ATGCGCTGTTGAGACGGTGGGAGGAGCGCTGGGAGAACTTGCAGCTCATATTGGAGGTGT
ACCAGTTCGCTCGCGACGCAGCCGTGGCAGAGGCGTGGCTCATCGCGCAGGAGCCCTACC
TCATGTCGCAGGAGCTCGGCCACACCATCGACGAGGTGGAGTCGCTCATCAAGAAGCACG
AGGCCTTCGAGAAGTCCGCCGCCGCGCAGGAGGACAGGTTCAGCGCGCTGCAGAGACTCA
CCACGTTCGAAGTGAAAGAGATGAAGCGTCGTCAAGAGGCGGCCGAGGCAGCAGAACGCG
AGAAGAGAGAGCGCGAGGCGGCCGAGGCAGCCGCCGCCGCCGCGCGCGACGCCGTGGACC
GCGCCGACACGCCGCCCGAACAACAACCCGCGCACGAGAGCCCCGCCCCGGCCCCCGCTG
TGACCCCTGTGGCCCTCGCGACCCCCGCTGTGACCCCCGCCGTGACCCCCGCCGTCCCGC
TACAAGTGTCCCCTCAACAATCCACGTCGAAACAGACCCCGGTCAAACCCGCACGCCTCT
CCAAGGGAGCAAGCCCCGCAAGTGAAGATGAGGGTATCGAAGGATCGTTAGTTCGTAAAC
ACGAATGGGAATCAGCCGCCAAACGGGCTTCAAACAGGTCGTGGGACAAGTTGTACGTGG
TAGCGAAGGAAGGTCGCATGACGTTCTACAAGGACCAGAAGAGCTACAAGGCGTCTCCCG
AGCAGTACTGGCGCGGGGAGGGCCCGCTCGACCTCACCGGCGCCGTCGTGGAGGTCGCCT
CCGACTACACTAAGAAGAAACACGTCTTCCGTCTCAGACTCTCGTCGGGCGCGGAGTTCC
TGCTGCAGGCGCACGACGAGGCGGAGATGTCGTGGTGGCTGGAGTCGCTGCGAGCCCGCA
CGGCCGCGCCCGCCACGCGCTCGCACACGCTGCCCGCGCCCGCCAACACCGAGCCCAAGC
GACGCTCCTTCTTCACGCTCAAGAAGAACTAAACCGAGCGACGTGAGCGGTATCGACCTC
GACGGCCGTGCGGTACGCGGTACTGCAGGCACGGGATCGTACGACGGTCGACTCCACCCT
CGCATGCTTGCAGCTTCACCACCAACCTCGACTGTATATGAGCGCCTCTAGTACGAAAGG
GAACAAACATTGGTGACTTCCTTCAAACGAGGTTTGAATAGTCCCACCGATTCTTGAACC
CACGAAAATCATTCGCGGTTTTCAGTTTGACTCTTTTCGACTAGAGGCGTAGTACTTTAT
GTTGCGTACAAATCTATGAATGTTCGATTGTATGTATGAATCGCCTTCTCTATTTATTGT
TCGTGTCGAAAACGTAGATTTTATCCGAGCGTGAACGATCCCACCCGCGTGTGATTAATA
TATTAAATTATAATAAAAAAGTTTTATCAAATTACATATTATTATTAAATATTATAAAAA
ATTCTAAATGCGACGCTATTTATAAATAGATTTTTAGTCTTTGAATTCAGATAAAAAAAT
ATTATATATCTATTATTATTGTAATTGAAATATATAAATAAAGTGGAGGTAGTTTATTGA
ACGTTTTGTTTGACTAGAATTTGAAGATTCGTAATATTTGACCAATCCTTTATTCTGACG
TAATTTATCTGAACCATGTAAAAGTTAGCTAAAAGAGATTGTAAACGCATTTAAATTGAT
TAGCATATCCAGTGGATTGTCACCCTTCGACTGCTTTGCAGAAGCAATACGAAATATGTA
ATTAAGCTACGTATTAGAAGTAATTTTTCCATAATAAAGTGTCTTCTTCTTGGCGTGTGT
CGCTGTTCGATTCAATGCAGCATTTAAATTATTATGAACTATTCTCTAATAGATCGTGAA
TGGGTTAGATATAGGCACTTCTGTGCAAGGATCAGCGACTTCCAAGCACGTCGATAACGT
ATTCAGATTTGTAATTATTGCTTGAGCCTAAAGTGCTTTTAAAATCTTTTTTTTTATTTC
AAAGTTTTATATTATTTAACTGCCAATTACACTGTTATATTTTTAAGCTATACTGAATTA
CACGTTATTATTAAGGTGACACGTTTCAGTTCTGTTTTTCGTAATGTATTGTGACGGGAA
AGTGGCAACATGGCGTCGAATATTATTTCGGAATAAAGTGTTGCCATAATTTCACACTTG
CATGTCGTACTATGTTTAAATATTTTATTTTAAATATTACTTTTTGATGAAAATATAATA
AATAATGTTTTCAAATAAAAAAAAAAAAAAAAAA
(8554 bp)

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