SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13381_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_general_vesicular_transport_factor_p115_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008565 F obsolete protein transporter activity
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0045056 P transcytosis
GO:0048193 P Golgi vesicle transport
GO:0048211 P Golgi vesicle docking
GO:0048219 P inter-Golgi cisterna vesicle-mediated transport
GO:0048280 P vesicle fusion with Golgi apparatus
GO:0048471 C perinuclear region of cytoplasm
GO:0051260 P protein homooligomerization
GO:0061025 P membrane fusion
GO:0090498 C extrinsic component of Golgi membrane
Transcript
Level		FPKM:13.39 TPM:11.27
ORF EntryO_TrvaMG1376_5prime_partial:A_TrvaMG_comp13381_c1_seq1
Sequence
(Nucleotide)
GCGGCGTGCTGGGGGCGCGGGGGGCGGCGGGGTGGCTGGTGTCGCAGGCGGCGGACGCGG
ACGACGCGCTGCTGTCGGGGCTGGCGGCCTTCCTGCTCGCTTTGCTGTATCATTATAATG
ATGATTCCGTGCCCGAGTATACTAAGGAGGCCCTAAAACAAGTGATAGTGAAGCGTATAG
GTCTAGACACGTTCCTGTCCCGTCTGACCTCCATATCTCGCCACGAGGCCTACAGCGCCG
CCACCAAACAACCGCAGCTCATCGTCTCCAAACCACAACACCTGTTACTGGACTACGAGT
TCTGTAACTTGTATAGAGAACATGAAAGTATACTGACGTCAAGCCTGACTGCGACGGAGC
GTCAGGACAGTCACGAGTCGCCGCCGCTCGAGGAGAGCGTCGCGCAGTACCGCGCCCTCA
TCCGCCAGCAGGACGCGCGCCTGCACGAGCTCGTCGCACAGCTCGACCAGCTCGTGGCGC
AGAACAGGGCGTTACAGAACACGCTAAACGACTCTCTAGCAACGAATTCACATCTCAAAG
ACGAAAACACCCTACTAAAAGCACAAGTATCGGCCGCTGCTTCATTCGCGACGAACCAAG
ATGTCTCTCAAGAATTCGCTGCCAAAGAACGAGAATACCAATACAAGATTCAACAGCAAG
AGTTTAAAATACGTGAGTTTGAGGAGAAGATCGGGAAACTGGAGACTGCTGCCAAGACTG
CTGAGGAAGGGAGACTGAAGGCTGAGGAGGAACTCTCTACGCTGCAGAAAGATCAGGATG
ACTTGCTGGTCCTAGTTGCTGATCAGGAACTCGAGTTAAATAAGTACAAAGAATTGGTAG
CGTCGTTACAAAATGTGCCTCAGCCGTCGACATCTTCGTGACCAAACTAATAACAATGAA
ACAGCGTCGTACAATATTACCGTACACTGCATGGATATTAATTTAAAAAAATATAATAAT
ATACTTTGTTCTATAGTGTCACAATACAAAAATAATTTTTTTATCGTCATTCGTTATCAA
AATATTTGGTATTTTTGACTGTAAATCTTACTAATTCATATTTAAAATGGGGAAGTTTGT
ATGGATCTTTATTACTCTTTCAAGCAAAAACTACTTAACCTATTCTACGCGTAACTGAAT
GTGAATACCTGGATAGATCCCTATGACTTGTTTGAGTAATTTGAAAATATTTTTTACTTC
ATAATGTCAACAAAACATTTATTAGTAGTAACGTCACATTGTGATCAATTTTATTACAAT
AAAGATACAGTTACACATGCTAGTTAGTAGCGTGCTTTTTAGTATGCTTATTA
(1313 bp)

- SilkBase 1999-2023 -