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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13349_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
Transcript
Level		FPKM:30.50 TPM:25.67
ORF EntryO_TrvaMG1358_5prime_partial:A_TrvaMG_comp13349_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTCTCTGAACACTGTTTTATTAATTATTTATTGAATTTCATT
AACATAATATATTGTTTAAATATTACAGATTAAAAACAAATATATCTTACACAACTGATA
ATATTCTAATGATATCTACATAAAATTATATGATAACTAAGTATTGTTACAAAATATTCA
TATTATAACAATTAATAATTATTTGGTTGGTCTTTTACTACCAGCACCAATTCCATTGGT
GAATGATATATTTGTTATCAACGAAAGTTGGTGCAAAATAATTTCATTATGTGACAATAA
TTTACAATATCTACTTAGTGTATTATCTAATATATTTTTTACAATTTAATTATTCTTGTC
CAAATCCTTCGGTTTCTTCGATTGCATAGTTCAATTTCTCACATAGCTGTTCGTAACTTT
TGTATGGAGGCAGGTCAAGTCTATTGAAACAAGTATGGGACCGCGGTAACCAGGTATCTT
TTCCGACCTTCTCTATACAAAATCTCTGTGGTCCATTCGAGCCCATTAACTCTGCGAAAC
CACCGACCGGGACTCTGCATGTTCCGGTCACAAACTGAAGTAGCCGAGCTCGTTTCTCAT
TATCCATTTGTCTTACGAACTGCCAGAACCACAGCACTTGTTTGCTGGTCCGCGTGTAGT
GCCTGTAGATGGTGTTCCGCTGCCAGTCGTCCACGTCCACCTCCTGCATGCCGCACAGCA
TCAGCTCCAACTCGCGCTCGTCGAAGTACTTCAACCATTCGAGGGGCACGACCTCATTAA
ATCCGTCAAGGAATGCTGAAGTTTGTTCTTCAATACCTCTCGTCATACGCCATTGTGTGA
CTAGTTGTAGATATTGTTCTTTGTTCGCTTCAGTGACGCGTTCTTTGTCCCCTCCCGGCT
TGAGCTCGTGATGTATGACCTGTCCTAGCACTTCGAAGTCAACACTGTACCACATCTCGA
GGCCGCACTCGTCAATATTATTGTCCTTGATCCACACCAAAGAGTTGTAGAACTCTGGGT
CGATCGATTCGATGTCTTTCATCGTTAATTTTTTATTTAACATACGCTTGTAGAACGGCA
TCGTGAACCCAGAGTATATGAATCTCCCGTGATAAAGTGCCATCGCTATAAATCTACCGA
TGAACTTAAAATACAGGAGATGGTCAGGGTTAACGTAGCTCGCAGGATTTATCTGAAGAC
TGTAGTTGTTTTTGTTAGCATATTCAAACAGACAGTACATTGGATTTAGCACTTCATGTG
AAAGGAGGAAAAACCATTCTCGACTGACTCCACCGTAATCTAGTCCTTCCTCTCCGCGGA
ATATTATGTAAAGTCGTCTGCGGAGTTCGTATGCAGGTAGCCTCATTATCTGATGGTAGG
AGTCTTCGAAGAGCGTCTGTCGCGAGAGGGTGATCTTGATGTGGCTGGGGAGGGCGTTGC
TCTGGCACAGATAGCGGAACTGACTGAGCTTCCAGCGGAAGGAGCGCTCGTAGGCGCGCG
GCACGCCGTAGGCCCCGTGCGGACGGTGCGGCGCGCCGGGTCGCGGGTCCTGGAACGTGG
TGGTGCGCGTGTTGTGGTCCACGAAGTAGCGCGTGCCCTCCTCCGTGAAGCGCACCTCCC
AGCCCGCCGGCAGCGCCTCCTCCACGCCGCTCACCTCCTGGCCCTGTGTTCTCGGGTCCT
CCCACTGCGTGGTGCGGTTCTTGTGGTTGACGTAGTAGACGCGTCCGTCGGGCTGCACGC
GGCGCTCCCAGCCCGCCGGCAGCGCGCCCAGCCCGTCGTCCGGCGCCGGAGTCGACCCGC
CGCCTGCACCCGCGCCCGCGCCCGCTACTCCGGTTTGTTGTTCGGTTTCAGGCGCATCGG
AGTGCTGCGGCGGCTGCGGATAGAGGAAGCGTTGGTTGCCCTGCGCGACCACGTGGCGCC
GCTCGCCGCGCCAGTGCTGGAAGCGAGCCAGGCGCTCCGTGTCGGGCCGCTGCCACGTGG
TGGTGCGCGTGTTGTGGTCCACGAAGTAGCGCGTGCCCTCCTCCGTGAAGCGCACCTCCC
AGCCCGCCGGCAGCGCCTCCTCCACGCCGCTCACCTCCTGGCCCTGTGTTCTCGGGTCCT
CCCACTGCGTGGTGCGGTTCTTGTGGTTGACGTAGTAGACGCGTCCGTCGGGCTGCACGC
GGCGCTCCCAGCCCGCCGGCAGCGCGCCCAGCCCGTCGTCCGGCGCCGGAGTCGACCCGC
CGCCTGCACCCGCGCCCGCGCCCGCTACTCCGGTTTGTTGTTCGGTTTCAGGCGCATCGG
AGTGCTGCGGCGGCTGCGGATAGAGGAAGCGTTGGTTGCCCTGCGCGACCACGTGGCGCC
GCTCGCCGCGCCAGTGCTGGAAGCGAGCCAGGCGCTCCGTGTCGGGCCGCTGCC
(2394 bp)

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