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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13320_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_87F-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001745 P compound eye morphogenesis
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0010906 P regulation of glucose metabolic process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
GO:0033119 P negative regulation of RNA splicing
GO:0036099 P female germ-line stem cell population maintenance
GO:0043565 F sequence-specific DNA binding
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0048477 P oogenesis
Transcript
Level		FPKM:66.50 TPM:55.98
ORF EntryO_TrvaMG1319_3prime_partial:A_TrvaMG_comp13320_c0_seq2
Sequence
(Nucleotide)
GCGTTGTGCTGGGGCGGCGTGGCTTCGGTAAAGAGAGGTCGTTTTGGCTGCCGTGAATTT
GTGATTCAAAATTTTAAATTGTGTAAAGCGTGGTCTTAATTTTGTTAATTTATTTAGTCA
GTACCGTTTAGGGTTTAATTCTTAAAATATGAGGCCGCAAAATGGTGATGATGGATATGA
AGAGCCAGAGGTTCACCGCAAAATTTTCATTGGTGGCCTCAACTATAAAACTACAGACGA
ATCTCTCAAAACGCATTTTGAAAAATGGGGAGAGATCGTAGATGTCGTCGTAATGAAAGA
TCCAAAGACGAAGCGGTCTCGAGGCTTCGGTTTCATCACGTATTCCAAGGCGCACATGGT
AGATGACGCCCAAAATAACAGGCCGCATAAAATCGATGGACGGTTTGTGGAAACTAAACG
CGCCGTCGCAAGGCAGGACATTAAAAATCCTGAAGCCGGCGCGACAGTTAAGAAACTCTT
CATAGGTGGAATAAAAGATGATCACGAGGAAGAAGAATTAAGGCAATACTTTTCCAATTT
CGGAAATGTTCAAAATGTGAGCATTGTCACTGATAAGAACACTGGAAAGAAACGTGGTTT
TGGATTCGTAGAGTTTGATGACTATGATCCAGTTGACAAAGTTTGCTTGAATGGGCCTCA
CAAAATTAATGGAAAGCCATTAGATGTTAAAAAGGCACTACCTAAAGATGGTTCTGACCA
AAGAGGAGGCGGTGGTGGCGGCGGCCGTCAAGGCGGTGGAGCTGGCCGGAATGACAGTTG
GGGCAATTCAGGAGGTTATGGTAACAACCAAGGTGGTTGGGGCGGAAACTCCAACCCATG
GGATAATGGCCAAGGAGGCTGGGGTAACCAGGGAGGCGGCGGCGGCGGTGGCTACGGAGG
TGGTGGTAATGGTAGAGGAGGGTGGGGCAACCAAGACTTTGGCAATTACAACCAACAAAA
TTACGGAGGAGGCCCCACCAGAAACCAAGCTTATGGAAACAATAGATCTGCCCCCTATAA
CATGAAT
(1027 bp)

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