SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13201_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_retinol_dehydrogenase_13-like_[Plutella_xylostella]
Ontology
GO:0001523 P retinoid metabolic process
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060342 C photoreceptor inner segment membrane
Transcript
Level		FPKM:10.98 TPM:9.24
ORF EntryO_TrvaMG1234_5prime_partial:A_TrvaMG_comp13201_c0_seq1
Sequence
(Nucleotide)
TTTTTTTAACATATTAAATGCATTTATTGAACTAAATTATATACTTAAAAATAAGAAACT
CTACAAACAAATTATTAATACTTTATTATTAATCTACCCTCGTTGTGAAGTAGCAATGGC
TGCCTTATGTTCGTCAAGTTTAGTCCATTTCTCACTGACCTTCCACAACCACTGTGCTAG
CTCGTAGTCTTGAGCGTCTTTTGAAGGTTCTGCTTCTTTCATATCAACAAAATAATCTCC
AGCGCAGTTCTGTAGTTTAGGGTCTAACGCCGCATGCACTATGGTCTGTCCACCGATCTC
AGAGGTCTTCATGAAGGGCCAGAACAGCGGGTAGATTATGAACCTCGTGATGCTCTTCAT
CATTGACATGTGGCGGGTGATGTTGGTGTCTACCAGGCCTGGGTCTATGGCTATTGTTGA
TACGCCTGTGCCTAACAGCCTCCTCCCCAGTTCCCTAGCGAACAGCAAGTTGGCCAGTTT
ACTCTGACTGTAGGCGGCGGGCGCGTCGTACTTCTCATTCATGTTGAGATCCTGTTTGTT
GATCTTACCACGATGGTGGGCGCTGCCTGATACTACTATTATTCTACTGGGAGCTGAGGC
CTTCAATGTATCTAGTAGTAAATTGGTAAGTAGAAAGTGTCCGAGATGGTTGACACCTAG
TTGTGTTTCAAATCCGTCCGCAGTGACACCTTTAGGAGGCTCCATCACTCCCGCATTGTT
CACTAACACGTGGAGTTGTGGCTCTTCTGCTTTGAATCTGGCTGCGAATTCTCTGATGGA
CTTGGTACTAGCGAGGTCACATTGTCGACAGTACACGTATTTGTTTCTCGTTTCCAGCAC
GATGTTGCGACGGATATCCTCACACTTCGTCATGTCACGACACGCCATGAACACCTTAGC
GCCTCGATTGGCAAAGTCCCTAGACACTGCCTTCCCCATGCCGCTGGTTGCGCCGGTTAT
GATGATCGTGAGATTGTCTGCGCGAACTTGTCTATTGTACGGTGGGCCGCTGTAGTAGTC
TTTGAATAAACAGATACCGCCTGCAGCCGCTGCGACCGCTGTTACTAAAGCTACCGGTGT
GCTGGGGACCCACATCTTGCCATACACTTGCTGAATTGGAGACAGCGAGTGTGTGGCCAG
(1140 bp)

- SilkBase 1999-2023 -