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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp13056_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_04296_[Danaus_plexippus]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.18 TPM:7.73
ORF EntryO_TrvaMG1155_3prime_partial:A_TrvaMG_comp13056_c0_seq1
Sequence
(Nucleotide)
TTTTTGTTTGTCGTATCGTAAGAAGTAATTATAAGCATTATAAGAAGAATTTGGTTCCAG
TGAATTATAAATGAACCTGATTTAGTTTAGTTTACGAATGTAATGTGTACAAGTTGGTTA
ATTACCTACAACTGATAAATTCATTTGTAACAAGTGAAGTTTTAGAGGTTATATACCTCT
ATCTAAAATGGAAACGATTTTAGAACAGCAGAGAAGTTACCATGAAGAGAGGGAAAGAAC
TATGGACGCAATGGTGAAAGAAATACTTCACAAAAAGACAGGGCACCGGGAAACAATAAA
TGGTGATCATCGCTTAAAGAATTTACATGATAGATACATTGAAGCATCTATAAGACTTAA
AGAATTGTATGAAGACAAAGATGGCTTGAGAAAGGAAGAAATATCTGCTTTATCAGGTCC
TCATGAATTCCAGGAGTTCTATGCAAGACTTAAGCAAATTAAAGAATTTCATAGAAAACA
CCCTAATGAGATATCTGTGCCAATGTCTGTTGAATTTGAAGAGTTGGCAAATCAAAGGGA
AAATCCTGCTGAAGACTATACAGTACCTGTTGAGTTCACTGATGAAGAAGGCTATGGAAA
ATATCTGGACCTGCATTCCTGTTATGAAAAATATATTAACTTGAAGGGCATTGAGAAAAT
TGACTACATAACATATCTGAGCATTTTTGATCATCTATTTGACATACCTCGTGAAAGGAA
GAATAGCGAATACAGGAATTACATCCGTGCATTGCTTACATACATGAAGGATTTTGTGAG
CAGGGTCAAACCTCTTATGGATCAAGTTCAAGAAATGGCTTTAGCACATCAAGAGTTTTT
GAAACAATGGGAGTCTGGCACATTTCCTGGTTGGCCGAAAGAAACTGGAGGAGCTCTGAC
AAATGTGGGTGCCCATTTAGATCTGTCTGCTTTCTCATCATGGGAGGAGTTGGCTTCCCT
TGGACTGGACAGATTGAAGTCAGCTCTGATGGCTCTCGGTTTAAAATGTGGAGGAACTTT
GGAAGAAAGAGCTCAAAGATTATTCAGCACTAAAGGTCAGACAGCCCTTGACAAGTCTCT
TGTAGCCAAAAAGGGAAATAAGGCGAAAGCTTCAACACAACAAAGACACAAAGATATTGC
TGCAATTGAAGCACAAGTTTACAGATTTGCAACTATCATAAGCAGTACTCGAGGGGCGAC
CATAGAGAATGTAACTCGTAGAGCGGCCAGGGCTGCTGGTGAACGACGCGATGAAAGCGG
AGACGAAAGTGACGCCTCTGCAGCGCCTGACCTTGACTCAGATGATGATGAAGTACCTTA
CAACCCTAAGAATTTGCCACTCGGATGGGATGGAAAGCCCATACCATATTGGTTATACAA
ATTACACGGACTCAACATCAGCTACAACTGTGAGATTTGCGGTAACTACACCTATAAGGG
CCCCAAAGCATTTCAGAGACATTTCGCAGAATGGAGGCACGCTCACGGAATGCGATGTCT
CGGAATACCGAATACTGCTCATTTTGCTAACGTCACACAAATTGAAGACGCTCTCGCTTT
GTGGGAGAAAATTAAGCAGCAAAAAGAGACAGAACGTTTTGT
(1602 bp)

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