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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12991_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_SPT4_[Plutella_xylostella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0032785 P negative regulation of DNA-templated transcription, elongation
GO:0032786 P positive regulation of DNA-templated transcription, elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
Transcript
Level		FPKM:21.54 TPM:18.13
ORF EntryO_TrvaMG1112_complete:A_TrvaMG_comp12991_c0_seq1
Sequence
(Nucleotide)
GTTTTGGTCTCCGTTAGTTTTTATTTTCTTACTTTAGATAAAATCTATTGGTGTCTAAAA
AAATAATAAAATAAACCTTAAAATGTCCATTGAGACCGTTCCAAAAGATTTGAGAGGATT
ACGAGCTTGCCTAGTTTGTTCTTTAATAAAAACAACCGAACAATTTGAATATGATGGTTG
CGACAACTGCGATGAATTTCTTCGAATGAAAAAGAACAAAGATAATGTTTATGATTGCAC
CAGTAACAACTTTGATGGGATGATTGCTGTTATGAACCCTGAGGACAGCTGGGTCTGCAA
ATGGCAAAGAATTAGTAGATTCTGTAAAGGTGTTTATGCCATATCTGTTTCGGGACGACT
ACCAGCTGGTGTGATCAGAGATATGAAGAGTAGGGGTATTGCATATCGCCCTCGGGACAC
GAGCCAGAGATAATTATATTTAGGTATTAGTTAATAAGAAATCTGTTCTGGAATGAAAAT
GTAGTATAAAGTGACCTAAGATACTGAAGATTAAATTAAATAATTTTAATAAAAAAAAAA
AAAAAA
(546 bp)

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