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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12908_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		chromobox-like_protein_5_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0007596 P blood coagulation
GO:0010369 C chromocenter
GO:0016032 P viral process
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0031618 C pericentric heterochromatin
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:12.55 TPM:10.56
ORF EntryO_TrvaMG1039_5prime_partial:A_TrvaMG_comp12908_c0_seq1
Sequence
(Nucleotide)
TTTTTTATTAAGAAATAGTTTTATTTTCTCCTGTACGTTTCACAATACATTCGTAATTTA
CAATAAAACACTGTTGTGTTTTACTATACCTACACTTAGGTTGACATCTTAAAATAATGC
AAAATTAAAAGTTCTCATTCACATTGAGATTTACGAACATCTTCACTATTTTTCTACGTA
TATCAAAGTAACACAAAAGATCTTTAGAACATGCAACGTAAACAAAATCAAATAATAAGT
CAATTTAAGTAACTGCTCATATCAACACAGCCTATATATTAATTTAAAAACTTAATATTT
ACTGGGATTATTTTTCGCATGCTTTTGTCCAATCTTTACACACTACAATCTGTATAATGG
CAAACTGTATGTTTTAGTGACCTATTATAAAAATATAGTCTTATGACGAGGTATCTGTTT
CAATCAATTCCAATTTTAAGTTATCTAAGAGCTTTACAAACACTCAACAATGGCTATGTG
CCCAATGAAGAGTCTTAAGATACTAGCACGAACAATTTAATATTTTATGAAATTACAATA
TTGAGGTACGGTATTGTATATTGTCCAAGACAAGAAAATTTTTCACAGAAATTGTAAATA
ACTCCATTTTTCTTGAAATACCTACATGTTCCCATTGAATGAGGTTATTGAATAACCAAT
TCCAAACAAATAAAGATTATTTGAAAAATTATCTCATTTCCATAGAATGTATGCAATTTT
GGATAAACACAAAACAGCTGCAGTTTGGAGCATCAGACACAGGAACATATAAACTGATGA
TCAACTCAAGTCCATACAAAATACTTAAGATAGGTACTTATATCTATTTATTCTGATTCT
GACGGCGTGTGCCAAGTTAGTCTTTCTTCGTAAAATGCTATTACTTGTTGTGGACATTTG
ATATTAGCTACTTTAGCGGGAACCAGCTCAGCCTCGTCAGTGTCCGTCCATTTGACCAAG
AACATTAGTTCACCGGTAGCGTCTGAAGCACCTATAATTTTCTCAGCCTTAAGTCCTTTG
TCAAAGCCAGTTTTACTTTTGTCTTCCTTCTTCTCTCTCTTGCTTTCCTTAGACTCATCA
GCCGAGGACACGCTGGCTCCGCGGCCTTTCCGTCCCGAGCTGGTGTCCTCACTCGACTCT
CGGACACGTTTCTTGGCACGATCCTCTGGTTTTTTAGCAGATTTCTCATTTTCCTTTCTG
TTCTGTTCAAATGTTCTGATAAGCTCTTCACAGTCCAAGTTCTCTACTGGTTCCCATGTA
CTCTCCTCCTCTTTATAACCTTTCCATTTTAGTAAATATTGAATCTTTCCTTTGACCGTC
CGTTTGTTAAGGACCTTCTCTACGACATACTCTTCTTCGCTAGATGCTTCGCTAGTCTCA
TTCTTCTTGTCTTTTTTACCCATTTTTACGTCTTTCAAGAAAAAAGCGGCAAAATTATAC
GAAAACACGTAATGGACGCGCG
(1462 bp)

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