SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12892_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vinculin_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006909 P phagocytosis
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0048812 P neuron projection morphogenesis
GO:0051015 F actin filament binding
Transcript
Level		FPKM:11.18 TPM:9.41
ORF EntryO_TrvaMG1031_3prime_partial:A_TrvaMG_comp12892_c0_seq1
Sequence
(Nucleotide)
CTCAGTTGGTTGTGTTATTTTTATTTTGTGATTATTTTGTGGTTAATTATTTTTTTGTTA
CGTTCTTAATGTAAATAAGTGTACAACAATGCCTGTGTTTCACACGAAAATCATCGAGAG
TATTTTGGAGCCTGTCGCTCAGCAGGTCTCCCGTCTGGTCATCCTTCACGAAGAAGCCGA
AGATGGCAACGCTATGCCAGATCTGGCGCGGCCGGTGCAAGCCGTGTCGCTGGCCGTTAA
CAACCTTGTCAAGGTGGGCCACGAAACCATCGAGTCATCAGACGACGCGATCTTACGTCA
TGATATGCCAGGAGCCCTACATCGCGTGGAAACGGCAGCTACTTTGCTCCAACAAGCTTC
TGATATGCTGAGAGCTGACCCCTACTCAGGACCTGCCAGGAAGAAACTGATCGAAGGTTC
CCGTGGAATCCTCCAAGGTACATCAGCTCTGTTGCTCTGCTTCGATGAATCAGAAGTCAG
GAAAATCGTGAATGAATGCAAGAAGGTCCTAGAATATTTGGTGGTAGCTGAAGTAATAGA
CACGATGGAAGATCTAGTTCAGTTCTTAAGGGACATATCGCCGGCTTTATCCAGAGCTGC
GAGAGAGGTAGCAGCCCGCGCCTCCGAGCTGACTCACCCGCCGCACGCCGAGATCCTGAC
TACGTGCCTCGAGAGCGTGAAGCAACTCGCGCCCGTACTCATCTGCTCCATGAAGATATA
CATACACATACTCACGGAAGGCGGCAAAGGTATGGAGGAAGCGGCCGAAAACAGAAATTA
TTTAGCGCAAAGAATGGCGGATGAGATACATGAAATTATAAGAGTTCTTCAGCTGACGTC
ATACGTGGAAGATGGCGGCGAGAAGGACAACATCGCTGTGTTGAAGGCGCTACAAACACA
GATACATAGCAAAATGCCCGCCGCGCACGAGTTCTTGAATGACGCCGACGCTCTCCGCAA
CAACGCAGGCGAGCGCGCTCTCCGCTCCGTGCTGACGTCATCGCAGCGCGCCGCCGAACA
TCTGCAGCCGGCCCTCGCGGACATTGTTACTAGACACGTCAGGTCTGGTGGTTACAACGC
TGATCAGCTGTGCGATGAACGTCAGTACGGCCATGGAAGGGAACCTAAGGCATTGAAGCT
AGCCTCAGAACTAGGCAATCAACTGAATGAACTGGAAGGAACTGTGAACGAAGGAGTTAG
AGCTGTCGAGAAACAAGGAGGAAGGACCATGCAGGCCAGGTTGGAGACAGCCCACAAGTG
GTTGCTTCACCCCGCGGCCGACCCTATGACGAGGGTTGAAGGGCAGAAAGCTATCAACAG
CATCGTCTCACAGGGACAGAGGATCGCAGACGGTCTCCAAGGTCGGGAGAAGGCAGAGGT
TCTCCAGCTATGCTCCGAGGTGCAGAGGTTGTCCGACAAGCTGGCGGACTTGTGCATGAG
CGGGAGGGGGGACTCGGAAGAGGCCAGGGCTATTACTAGGGAGCTGACAGACAAGCTGCA
CGCACTACGCGCGGCCACCGAGCGCGCCGTCGTCAACCGCGTCGTCGAGGAGTTCATAGA
CGTCGCCGCGCCGCTCAGACATTACACCGACGCTGTCAATGCTCCCATAGGTACTCCAGG
TCGCGATGCCAACTTACAGCAGCGCGCGTCGGCCCTGCAGTCGTTCAGCGGTCGCGCGGC
GGGCGCGGCGCGGACGGTGGCGGCGCAGGCGGGACACAACAAGAGACTCGCTGACCAGCT
GCTACACTACGCCACTGAGGTGGAAAAACTATCGCCTCAAGTCATAGCGGCCGGCAAAAT
AAGATTCTACAACCCGGATAGTAAGGTAGCAGAGGAGCACTTCAACAATCTGAAGGGCCA
GTACTCGGAGGCCGTGCTGAGGGTCCGGGATCTGTGCGACCAGGCCGTCGACCCTCTCGA
CTTTGTGAGGACGGCAGGTGAACTAATGCAGAAACACACGTATCTGTGTGAGGACGCTAT
CCGGAACAATGATTCACAGAAGATGGTCGACAACACTTCAGCTATAGCGAGGTTGGCCAA
CCGAGTATTGTTAGTCGGCGGGTCCGAGCGAGATAACACTGAAGACGGTCAATTCGCTCG
AGCACTGGATGCAGCGCACCGCCGGCTGCAGGCTGCCATCCCCCCCGCCGTACTGCGCGC
TAAGGACGTCGCCCGGGGGGACCGCGGACAACTGCCGCACTGGAGGGCTGCTAATGGAGA
GATCATCAAAGCAGCGAGCGAGATGGAGTCGGCCCTGGGTCAGCACTACGCCCCCCCGCC
CCCGCCGCCGCCCGCGCCCCCCGCGCCCGTGGAGCCG
(2317 bp)

- SilkBase 1999-2023 -