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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12287_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_ubiquitin-protein_ligase_BRE1_[Danaus_plexippus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016032 P viral process
GO:0016887 F ATP hydrolysis activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045898 P regulation of RNA polymerase II transcription preinitiation complex assembly
Transcript
Level		FPKM:2.27 TPM:1.91
ORF EntryO_TrvaMG658_5prime_partial:A_TrvaMG_comp12287_c0_seq1
Sequence
(Nucleotide)
GATGATGATGATGATGATGATGACATAGTTGTAATAGAAGATGCTAAAGATACGACGGAT
GAGAAATCAACTAACAATGAGGAAATAAAAACTGATGTTCCTGAAAATGAAAAAGTTGCG
GTAGTTGAAGAGTGTGCAGAGAAGAAAACTAATTTTATGGAGTCTATAGAGTTATCGTGT
AATAAAACCCTCAAGGATGAAGAAAAAGAACTTACCAAAACGGATGAAAAACTGAAAGTT
CAAACTACCGAGTTATTGAAGCAAACTAAAGAAAGAAAAGAAGAAATACCAGAAAAGCCT
CTAGTCACCACGGATTTTCTCAAAACGTCAAAGAAAACCTTAGCAAGTATGACGAGAGAC
GAATTAGAAGAATTCTGCATCCTAAAAATAGTTGAAAGCGTTGTGGACCGAATCAATTTT
TCGGAAACGCAAACCAAATTAAAAACATTATCACAGCATCTAGACGATTACGAGAAGAAA
TCTAAAATGCTCGCAAAACAAAATAGAGATCTTCAGGTCGTTTTGAAATCGATACAAGAG
GAACAGAAGAAGACATTCAGCAACTCGCAACCTATAACACCTTTGAAGATAACAAGATCA
GTCGGAATGCAAGTCTTGATGCCAGAAAAGACGGTAGTTACCCGAAAGAAATCAACACCA
CAAGCGCCCAACGTGGTGCCTCCACTGAGCGTTATCAGAACAAGGAATCAGACCCAAGCC
AGTCAAAAACCGACCCCCCCAACAAAACCCCCGAACAACGAAAATATCCCCGTACCGAGA
CTAATACCGGCCAACAATAGTGCTAAAAACAATACTCCTATTAAAACACCGAGTCCAAGT
TCCAGTAAGGTCGGTAGTCCCATGAATGGAATTCGAACTGCGCCTCCTCAAAAAGTTGAA
AAACGATCGATGAGTAAAGACCAAGCTACAGTAGACCTTACTGATGATGAGCCTCCTGCT
AAGATAATTGCGCGGAACCCTCAGCCGCCAGTTCGGTTGGTGTCACCGCAGTCTCTAATG
GCACCGCAAAGGTCACCATTCGGCCAAGCTATGAATAGCCCTAGAAAAGTTTTCATTCCC
ATTAATAGTACGAATAATTCAGTCAGACCTACTCCGACTGTAATGATCAAAACACATCAT
CCTGGAGCTCAACGACAAAGACCTAATACACCTATGAGGATACAGAGTCAAATTAAAAAC
AGATCCAATATGCCGCACCGGCATCCCGCGCCCCTACCAGAAATCATGAAACAATATAAC
CCTCCTAATTGGAAAGCGTTACCGCCCGCTCCCGACTTGAAACTATCCAAAGTAGAAAAC
GGTATAGTGATATCTTGGAAAATAAACGGATACCAAGAAGACAATCATGAGGAAATAGCC
AGTTATCAATTATATGCCTATCAGGAGACAGCGGCGCCCCCTAATACCGCTTTGTGGAAA
AAGATTGGTGATGTTAAAGCATTACCGCTACCTATGGCATGTACTTTAACTCAGTTTACA
GCTGGCTATAGTTATTATTTCGCTGTGAGAGCGGTAGACGTCAAATCCAGGCTCGGACCT
TTTAGCGAACCCAGCAGTATACTATTGCCCCACAAAATGTAAGACTGAATTGTTTAGCAT
CGATTGATGGAAGTAAATATTGTGATCCCCGTAATAATGGTGAAACTCAAACCAATGTGA
TTGTTTTAAGTTGTATTTATGTTGTACGTTTTAAAGTTATTATTTAGTATTAATATGTGC
TGTTGTAAATTGCGATTTAGGTGTTGCTAGGCTAAATAATGAAGATTCTGTATCGCGCAC
AAATGTCGGAGTCAACCATTTTTTTGTACCTTATATTGCGCGTTTGACTTGCGACTTTTC
TACACTATTAGGAAAAATGTACATTAATTCCTTTTACTAAAACAGACTAATGTTTGATGT
TTATAATAGCTAAGACTAGCCCTTATATGTATCAAAAACAAAGAAAAGCAATAACAAAGG
CTTAACTGTACAGTATCTATTGTTCTACAGATTATACTATATAAATATAAGTATCTATGT
AAATTGTTAAATATTGTCAGTTCTGCTATTTAAATTATGAAAACTTGCTGCATATAAGGG
TAATAAAGAGCAATGTAAGTAAATGTGCATTAAAATTCTACTATGTGGACACAT
(2154 bp)

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