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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12280_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		cellular_retinaldehyde-binding_protein_[Bombyx_mori]
Ontology
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:1.09 TPM:0.92
ORF EntryO_TrvaMG657_5prime_partial:A_TrvaMG_comp12280_c0_seq1
Sequence
(Nucleotide)
CGTCCCCATACATAAAAGTAGGTATTACTGAGCAAAATTTATTTGAGACTCTCCTTGTAA
AAGTGATAGCCTAAATTATTTTTATGTAATGTGAAATCATCCTGTCGCTTTTTAAGAAGA
CATAATATCGCAAAAAAGAGTCTTTTATTTAAATGCTCCTAATGTAATTATAGCACCAAG
TCTTAAGTTTCTTTGAAATTTATCAGGTAATTTTCGAGTAAAAATAGGGAGTATAAATTT
AGTAAAATCAGTTTTTCATTTAAGCAAGAAAATTTTCAAAAAGTCATCCTAATATAAATT
CTTTCACCTAACTTATAACTTATAATTTGAAGCTTCCCAGTTTCAAATCAATAGACCATT
TAATAATTAATTTTAATGTAACATCAGTCGATGGCTAGTTGCCTAAAAGATCCATCAATT
CCAAACAGTTCATCGTAGTTGGTCGGACGGCCTGGTCTTAGGGATTCGTTTGCCTTAACC
GATTCCTGGCGCTTGAACCATTCTGTGTATTCTATTAGCTTTTGGTTCCATTTTTCTTGC
AATAAGCCCATAGTGCTGCACTGACCACCGTATTCTTCGGGTAACATCTCCTGTGGTATG
TATTTGTATAGATCTTTTACTTCTTTGTGGATGTAAATCCTTTTCCTTATTTTCTCCTTG
AGAAAAGGTTTAACAAAATTGACGAAGCGTTCTACAATTGGCGATGTGTTGACGATATGT
ACTTCCTTCAATTTGATTGGGTAAGCTTCCTGAACACAAATCATGAATTTCTTGACAATG
GCAGGCGAGAGTTTGGCCAACATGCTGGGTCCAAGGACAGCTGCATCCAACACATAAATA
TCTCCTGCAACTCCTTCCTTCTCTTCTGTTAGTCTTATATCACCAATCATCAGTGCTAGT
TTTAGTGTATCAACTATTTCTTGAGCATCCAGATTTGGGTGTATGCCTCTGCAAATAGTG
ACTCTTCTACCACTTGGTGTGATGCCTGGTAGTGGGGGTCCTTGAATTTTGTTAGTTAAT
ATTTCGTTCAATTCTGGTCTAGATGCGTCACGATTTGCGAAAAAATTCAGGGCATG
(1076 bp)

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