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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12179_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_procollagen-lysine,2-oxoglutarate_5-dioxygenase_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0001701 P in utero embryonic development
GO:0001886 P endothelial cell morphogenesis
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0008104 P protein localization
GO:0008475 F procollagen-lysine 5-dioxygenase activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0021915 P neural tube development
GO:0030199 P collagen fibril organization
GO:0030867 C rough endoplasmic reticulum membrane
GO:0031418 F L-ascorbic acid binding
GO:0032870 P cellular response to hormone stimulus
GO:0033823 F procollagen glucosyltransferase activity
GO:0042311 P vasodilation
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060425 P lung morphogenesis
GO:0070062 C extracellular exosome
GO:0070831 P basement membrane assembly
Transcript
Level		FPKM:1.68 TPM:1.41
ORF EntryO_TrvaMG614_3prime_partial:A_TrvaMG_comp12179_c0_seq1
Sequence
(Nucleotide)
TACACTTGGTAACTCATCATCTTTTAATTCTATTTTTTTCTCTTTACATAAAGCACAACC
TTCTTTGACTGACCATGATTGAGCCAAATAGTTTCCATAATGATTTAGAGTATTTTTAAC
AGGCCCATTTCCATGGACAATCAAAGGTCTCAGTTTAGTTGCTACATTTTCAATATATGG
CCATTCATCAGTAGTGTTAGTCCTTAATTGAACATCAGATAATGCTCCGTTTAAGTTCTG
GAATATCTCTGAATTGTGGTCGAGTGTAATTTTGAGTGATTCTCTCAGTTCCTTATCTAG
GTAAATCTTTGTGTAGTACAATTGATCATCATCCTTTTCTTTTATGGGTTTGCTGCTTAC
AATTTCATAGATTTCTGGCAAATAACCTATAAATCCACCAGAATTTAAGTATGGACTAGC
CACTTCAACATTTGGATATTGTGTTGCAAGTTTTGCATCTGGCCAACAAAATTGCTCAGC
AGAAAATACAACTCTGCTATCAAATGATTTAAACTTCTTCACAATCTCGTCCAAGTTACC
CAAAAACATGACATCATAGCTGTAAGTAAAAAGTATGATTTTTTCCTTATCATCTGCTTT
CATCATTTTGTCCAGTCTGTTTTTAAGAAGTATAACTTTTTGTCCGCCTCCTGGGAAGTT
CATGTCACCGCCAGACCAATCTTCACCCTTCCCCAGTATCTCAACATCAATGTTATAGAT
TTTAGCAGAGCGAAGGAATCTCTCCAAGCCATGATTATCATCAGTAGCAACGGTCAGGAC
AATCACATCATCTCTAGCATGTATTTGACTGATGTACAGTAAGAGAAGAACCAAAAATGG
CTTGTAAAGTGCCATTCTTCGAAAACACCTCATAAACTTTTAAATACAATACAAAATTGT
TGAAAATAAGCTATAGAAAGATCTAGAGTAACGACATCAATGACAGCATTTGTACATATG
CGGCTCCCGGTTTTTCCGCTTCCGAACTGATAAGCTCAGAATCGACCGATAAAATTGTGC
CTACGCTGAAGTCCACTGAACTCAACAATGGTCCAGTAACTATACAATTTACTTTATGTC
GCAAGCGACGAGCGTACACTGACCGGCGTCAAACCGCGCACGCCGTCTAACTCACG
(1136 bp)

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