SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12043_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13-like_[Plutella_xylostella]
Ontology
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
Transcript
Level		FPKM:2.37 TPM:1.99
ORF EntryO_TrvaMG551_3prime_partial:A_TrvaMG_comp12043_c0_seq1
Sequence
(Nucleotide)
GGGGGCCGCTCCACCTCCGTCATCAGTGCGTACGGCACCGGGTACCGCATGCGAGCACCG
CCGCACACCACCTCGACAGCCCCGCATCCTTGTTCGAGCGGGTAGAGTTGCCTCCACGCG
TCAAGAAGCCGCGCCGTTGCCGCGTCGCTGTCGCTCCACTGCCGCCCCGTCAACGTGCCT
TCCAGACCGAACGGCGCCAAGATCACTTTAGCATCAGGCTGGTTATCGGGCGAGTTGAGT
TTGGCGAGTCGTTTAGCGGTGAGCGTGCGCACAGGCGGGTGTTGTCGCACGTCCACGGAC
GCGCACACCGTGCTCTCGCCGTGCAGGAAGAACGCGAACGAAAACGACAGGTGCCACGGA
CTTTTCCCAACGTCTTCTTCGTCGCCATCGTAAGGTTGGACGAACCACTTGCCGAGCCTT
ACAAAATCCCGCGAAAGCAGACATCTTTCTATCAAGTTATGCAAGGCCTTGAACAGCAAG
GATCGGCATTCGTACGACAATCCACTCTCCCAGGAGCCGTGTTCGCTTTGTCCGGATATG
AGTTCTGGCGCGACGAGTCCGTTGAGATCCGGCTCCTCGCCGTACCAGAAGATCCATAGC
TCCTTGGCGGCTCTGAGCGAGAGCGGCGGCGGCTGCGGCGGCGGGGCGGGCGCCATGTCG
TAGATGTCGGGCGGCGGCTGCGGGGCCGGCACGCGCCGCCACACGCACAGGATGTCGCCG
GCGAGGCAGCGCGCGTAGCTGCTGATCACGGGATCAGCGAGAGGCGCGCCGTCCTCGCCC
TCGACGACGCTCGTCTCGCCCCACACAAGCTTACGCCATTTTATGCCGAAAAGCTCCGTC
AAGGCGAAGAAGTTTGTGTGGCAATCCTCGAGACTTGCACCGTTTGTTTGGTGATTTTGA
TGCGTCATGGTAGTCCGGGGCACTTCATTTTCATTTCACAACACTAAAAACAGGTATAAT
CTTAAAGAAACCACTCAAAATCTTAAAATCATCACCGACATTTAGCGTAGTTTTCAC
(1017 bp)

- SilkBase 1999-2023 -