SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11905_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.35 TPM:2.82
ORF EntryO_TrvaMG484_internal:A_TrvaMG_comp11905_c0_seq1
Sequence
(Nucleotide)
GCCGCCGCTCCCCGCCGCCGCCGCGCCCGGCGCCTTCCTCGCCTTCGACGAGAACCGAGA
CGGACACGTCGACTTCAAGGAGCTCTGCTGCGGACTCAGCGCCGCCTGCCGCGGACCCAC
CACCGAGAGACTCAAGTTTTGCTTCAAAATCTTTGATTTGGACAGCGATGGAGTATTAAA
CAGGAAAGAGCTGGTAGACATGGTGGACATTCTGTGCACCGTCGCCAACGACAACATGAA
GCAGCAGCACGAGGGGTCGCGCGCCTCCACCCCCTCCCTGTCCTCCGCGGCCCCCTCGCC
CGACGCGGGGGGCGCCTTCGAGCCCGCCGCCGTGCTCGCCGACCTCGTCAACAAGCTGGA
CGTGGCGCCCCACAACGGACGGAAACCGAACTTCCACCTCGGCCCGCACCACGACCACAA
ACACACCGCGGGCTGCCAGGGAGGGACCGAGTGGGAGGTGTCGGCCACGCTGGAGGACTT
CCTCATCTGGTCGGTGGAGAGCGCCGAGGCCGTGGTCACGCCCTTCCTCGACCTCATCTA
CCAGGTGTGCCACATCGTGCTCGGGCTGAGGCCGCAGTGCCGCCGCAGCGAGCGAGACAT
CGTGCTGGGGTGGTTGCGGCGGTCGGTGGCCAGCGGGTACAGCGTAGGACAGTTCTGGTA
CCTCATCTCGGCGGAGTGGTGGAGCGCGTGGCTGTGGTACACGGGCGAGGGCGCGGGGGG
CGGCGCGGGAGGCAGCGCGGGGGGCGGCGCGGGGACCGGCGAGGAGAGCGGCGTGTCCAC
GTCGAGCGAGTCGCTGGGCTCGCTGCTGTGGCGCGGGGACTCCGCCTCCGTCATCAGCAC
CGCGTCCAGCGCCGCGCCGCGCCGCCACCCCGGACCCATACGGAACAAACGACTGCTCGC
CGACAACACGCACAAGGTGCGCACGCTGACCGGCGAGGGCGGCCACCTGCGGCGCGACGT
GACGCTCGCCCAGCACCGCGACTTCGAGCTGGTGCCCGACGCGCTGTGGAGGGCGCTGGC
CCTCTGGTACGGAGGACCCGACCCGCTGCCTCGCCAGGTGATCCGGCCGCCCAACAGCGA
CGTGGAGCTGGAGCTGTACCCGCTGCAGCTCAACATCATGAGACACGTGCCCCAACCACA
ACGATCTGTGGGCAGCGTACCGGAGCGACAGCTCGCCTACACCGCCGCCTTCTCGCGGCT
CGCCACCATACGACAGGTGTGCGAGTTCATATGCGGCGCGCTGGGTCTGGCGCGCGAGGA
CATGCGGCTGTGGC
(1274 bp)

- SilkBase 1999-2023 -