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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11715_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-16_[Papilio_polytes]
Ontology
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0045022 P early endosome to late endosome transport
Transcript
Level		FPKM:1.20 TPM:1.01
ORF EntryO_TrvaMG361_5prime_partial:A_TrvaMG_comp11715_c0_seq1
Sequence
(Nucleotide)
GACGTACTTAGCACCTACGTTTTGGTAAAAACTTAATCGAATGATAATTATAAAATATCA
ATATCTTCTCGTGTTAACATAAATACATTATAATGCACAAACTACTTTTTTCTAACGTCA
ACCAATTAACTTTTGAGTCGTAAAAGATCGACTCCGAATTCGATAATTTTTTATTGGAAA
CTTGCAAAAACTTCCCAATGGAATTTCTTATTTGGGGCACTTTGGGATGAATTTTGGAAT
GTTCAAATCGAAATTAATATCACTATGAAGCAGCCAATTCGCTATTATATTATTATCCAA
TTAATAGCAGCCAATGTGAGCTTGTTTACGCTATAGCCGGATCCTTATGCATTACCGAAA
CTACAGCTGCTCTATCACCTAAGAAGCTGAGAATCCGTTCTGGGGTATTACCGAATTTAG
AAAAAGTATTAAATATTTCAAAATACTACTATAACAGAGTTTGCCCAAAAAGACAGTGTT
GTGGACCAGCCAATCAATTCGCAAACTTTGAAATACAACAATTAACTTTTAGGCCTAGGT
GGACCTTATATTAAAGACTGCACTAATCATAAACAAGTGTTCAAAAACAATAGAGATATA
AACTCTTCGTTAGAATATTGTCTATTAACTGTATATTCTTAGAAATATACTGGAAGACTC
TTAATTCCACAGAAAAGAGCTGCTTCAATTTACATTTTTCACAAATTAGCTTTAGTCCCT
GCTACATACTAACATTATTAATTTTTCCACTACAACTCGAGCACTGTTCGACTGTGCCCT
CTAAAAGAGCGACACGCTTCTGTAAATGCATTATCGTAGCGTCTTTTTGCTTCAATTGCA
TTCTTAAGGTGGTTATTGAGTCCTCTAACGCCCCATAAACAGCTTGAACCTCAGGCTGAT
AGCTAAAGTCTTGGGGAGGTTCGTCAAGGCAGAAAAATTCCCGAACTATAGGATGGTTGG
GCAATTTATACAGAATGACATTCACAAAAGTCTGTAACCCCCGCACTCTTTCTTCGAGAA
AAGAGGGCTCGAAATTATCTCGAAACCACCTTTTACCTGGCAGAGGTAAATCAATGTTCG
GTTCCTCAGATTTCAACCTAGAATATAGTCTAACGAAATCCGTGTACCTTCTGAAAACCA
GCCAGGATTGGTCGCGTTTATCGTCCTCGACCTTCAACTTGTAAATGGTGAACCTCGCGC
GCTCCTCCATCACCTCATAACCTACTATTGGGATCTGCAGTTTATCGAATTTCTTGATCT
CCGCTCTGTGTAGACTCAAGTCGATATTACTGATGCTGTTGGTCACTGAAGATATGTTGC
GATTGTGGTCGTTCCTATAGTTTTCGTGTAGGTTTTGCATGCTTTTGCAGAACTGGCGGG
CCCTTGGAGGTCTAACGGGTCGTTCGTTGTCCGAGGCGGAGTCGTACCTATTTTTGTAAT
AATGTCTGATTCTGCCGAAGGTCGTGTTGTCGTCGCTGGAGGTTGAAGATACTTCGTTGT
TCATCGAGTCTCTGTTCTGCAGGTTTATGTTTTGTACTATATCCATGTTTGTGGTCATTT
TGCGATAATATGGACTTGAA
(1580 bp)

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