SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11589_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_gem-associated_protein_2-like_[Papilio_machaon]
Ontology
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0097504 C Gemini of coiled bodies
Transcript
Level		FPKM:2.70 TPM:2.27
ORF EntryO_TrvaMG289_complete:A_TrvaMG_comp11589_c0_seq1
Sequence
(Nucleotide)
TCGATTTTTTCTCAGAATAAAAGAATATATTAATAAAATGCAATCCATTTAATAAGATTA
AAATTGTGTTAAAATGTCAACAAAAAAGTTATACACAGTGAAAGACGATGAAGTTGATTC
GGAAATAGTTTCACCATGCTTTAAAATAAGTTCGGATGTGCAGTTCAAAGAAATACCAAC
TAACGGCGAAGAATATTTGTTGAAAGTTATTAAAGAACGTAAAAATATTGCAGTAGTCAC
GAAGTGTGATAAAGATTATTCAAGGTTCGCACAAAATCAGTCTCAATATGTTCAAGAGCT
ACCAACTTTATCAGCACCAGAAAAACTAAAACCAACAATTGAATGGCAGAACATGCAGGT
AGCCGATTTCTCTGAAACTCGAATGTACATATCTCGTTTACTGTCAAAAAGGAAAGCATG
GAAAGATAATATTAAGAAATTAGAAGTAAAGCCAAACTCTGCAGTCGAATGGAAAGAATT
CTTTAGCTGTCATGAGCCTACATTGTCATGTGTGCTTGGACTACACCACACTACTTTGGA
ACCAGGGTTAGAAGTACTCACTGATATTATCAGTAGAACTAAACCCGGTGATACTATAGA
ATATAAAACAGGTCAATGGGTATATGCATTTTTAGCATGTACTAGACTTCCCTTACTGTC
TGATACAACAAGTATTTTAAGAGATCTAGCTAGGAAATGTGCTGAAATAAGGTCTAGATT
AAATCCTGATGAAGAAACCTCAATTGCTGCTACTGCTCCGTTGAATATCTTCATATGTTT
AGTAGCAAGATATTTTAGACAATATGACTTAGCGGATTGAATTTTAGCTCATAGTAAATT
TACTTGTTAGATAAATGAAAATACAGGAAATGAAACGA
(878 bp)

- SilkBase 1999-2023 -