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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11563_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_19145_[Danaus_plexippus]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0001570 P vasculogenesis
GO:0003342 P proepicardium development
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0021915 P neural tube development
GO:0033077 P T cell differentiation in thymus
GO:0035264 P multicellular organism growth
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0060710 P chorio-allantoic fusion
GO:0060712 P spongiotrophoblast layer development
Transcript
Level		FPKM:1.97 TPM:1.66
ORF EntryO_TrvaMG263_complete:A_TrvaMG_comp11563_c0_seq1
Sequence
(Nucleotide)
TTCAAAGAAAAAAATCTATTCTATATCGAAACTATATTTAGTTCGGTCAAGTACAAAAAT
AATAACTGTGCCAATTTTGAATATATTATTCAAAAAGCAGACAATAAATAAACAATCATT
CTATCTCGATAAATTAAAAGTTAAATATTCATATTATTACAAAGGCACGATTCGTTTTGT
GTGACGTCGACGGAGTTAGGGCGTGGAAGCTCAAGGAAATTGTCGCCTTCATTCGCATCG
ACCTCACGATAATATGTTACGGCTAAAGTTCGTCAACATTTAACACATGCTATGTGATAT
ATTATTTCTCTTTAATAAATGTTTTGCGGTGCACGAGACCTCCAGAGTTCGGCCGTTTAT
GTTCAAGAAACACGGACAATTTTCGTTTTGCCGATGCAGTTTTGTAATGCTCCGTCGCCG
ATGTAAAGGAGTAGCGCTGCGGGCGAAGGCGAAAAAACAATCACCTAAACGCAAAACAGG
TTTGAGATGAGACCGCTTCGCTCAACGAAAGGAAAAAATCGTTCCTTCCAGACAGGTCGA
GAGAGGAGCGGCGACTTTATGCCGAGTTTTGTGTTTCGTAGTTAATTACAGAGAATTTGT
GCAAGACTAAAATTTCATGACAGCTTTGATAATCTTATTCTTTTACAACGGTGCGGAGCA
GTAATCATATTATTATCAGCTTGAATTAGTATATTAAAGGCCGACCTCTAGAGGTAAAGA
ACATCAACTGATTCCGTCCGTGGTTGTAGAGGACTGAGATTGTTAGTGTTGTTGAATCAG
AATCAGCCGTATTGTGTATCGCAACGAGCCACGTCCCAGCGACGCGGGCCTCGTCCGTAT
GCGGTGTGGCATCGCAGCTAGCTACAAAATAATTAATAAAGTTAAGAGACTCGAAATAAA
TAATAAATTATTATCTTATACACTTAAAAATAGATCACGAGCGCCTTCTCGCGGTACGGT
ACCGAGCGCGGACAGGCAGTACGAAATAAATAATGTTCTATATGCTAACTTTACAAAGAC
CACCGCTCGGCGGAGGATCGCATCGGGAAGACTTCCGCGAGCTAATAAATATCTAATATT
AATAAAGGTGCCATGTACAAGTGCGTGCCGATAACTAAAATTGAACGTAAACTAATCACA
CCGCAAACTTTCGAGACGCCAGTGAACACTTTGTAAATGTTAAAGAATATTACTGGTCGA
AAGTATTAACAAAGACCATCGATACACATCATCAGGAGATCATTCGTTGAGCGGGTGTGC
ATATATGCGCGAGGCGCGGCGACCGGGACGTCGCTCGTGCGCGGTCTGGAAGACGTCGAG
GAGGCACTACGGTGTCGGACGATTCTTATGCTATGCTCGGTATAAATTAACTTAGGACTA
GTTCATCGCACTAAGCGATGACGAGATCGCCAAGGGCCGACGAGAGACGGTTGAAAACGG
GCAGTCGGTCGTCCTCCGGGTCCGGGGAGTTGGTGCGGCGGAAAGCAAACGCTGTCTGCG
CTGGTGGAGACATCGCCGGCGGTGAGTGCGGCGTCATAGGAGAGTGCGGTGAGCGCGGAG
ATCGAGATCCATCGCTCATGTATGACGCAAGCGAACCTCCGGACGACAACGATGCCAATG
AACCTCCTGGAGATGACGACTCCCTGCGTCTTGCTTCTTCGGCGTTGTGCACGAAGTGAC
AACGTGGCCCATAGGGACAGAAGCCAACTGAATGGAACGTGCGGCACAACTCCGTTTTAT
ATTTGGGATGACGCTGTAGATTGCGCAGTTCGCGCATACCGTGAGCGAATTGGCATTTGT
CCCCATATTTGCAAACGCCAGCTTCCTCGAATGGTCTGCAGAGTTCGGTCTTGTAACGGC
TTGTAGCTGGCGGAGGCGGGGCTGGTTCACTGGTGGTGCGTTCAAGGCGGCGACGACCAA
GGCTGTCTAACAGACCGGCCAAAGCACGGTGTGCTGGTACAGAAGAAGCGCGAGACAAGA
CTGGATGCTGCTCCCAGCTTAGACCGCTTGATACTCCATTGGCTCCAATTGGTCCTATGG
TGCCGCCTATATTTCCATTCATCGTCTGTGCTGGTCGAGTTTGGTTCTTCAAGAACAGAT
CACCAAAGTCGTGCAGCGCAGACTGATGCATTATGGCTGTAGACATCATGTAGACAAAAT
GAACTCGACACTTAATCCAGATTTTATTATCTTCTTGATTTGTTAATCTGGGATCTGATC
CACTGTAGCACGATTTATAAGGTCGACGAACTCACTATGAATTTTACTTTAGCTGATGAA
AAGTTCACGAAGTTTTTGAAGGGTTTTTTTTCCAAAATCCTTTCGATTTATAGTTCAATT
ACTGAGGTCGTTGCGATTTTGTTTCGCGTTCGGTGATCAGTTTGTATCCGAACTAGTTGG
CCAAGAGGCGATTTTCTACCTCTTCCGATTTTAGCCAAAACAGTAATTTTGAACACAATT
TCGCAAACGCTGCGAAAATGTACAAAACGGTCCTTTGTTTCGAAAAGTTTTTCCAACCTG
ATTTATTCGCGTCTATACGGAAACACAAATATTGGTCAAATTTCTGCGCGAACTGCGTCA
AAGTTAACTTTTACAATAGAAACTTTTTTGTAGCTATCGACTTTATAAACCAAAAAGTTT
TTATTCTGGTTGTATAAATCGTATTTTTTATAACAAATCGCAGCGTCAACGTCCGCGCAA
AACGCACCACACGTACATTCCG
(2722 bp)

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