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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11504_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_LRSAM1-like_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0045806 P negative regulation of endocytosis
GO:0046755 P viral budding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070086 P ubiquitin-dependent endocytosis
GO:1904417 P positive regulation of xenophagy
GO:2000786 P positive regulation of autophagosome assembly
Transcript
Level		FPKM:2.00 TPM:1.69
ORF EntryO_TrvaMG224_complete:A_TrvaMG_comp11504_c0_seq2
Sequence
(Nucleotide)
GAAATTTGCTATTATGTGTCCTAACTTAAGGTGACGGTTCGGTTACCGTCGGTTTTTTAT
TTTGAATATTTTTATTTTTTTTCTGTTAATGGGTTGTGCTGCATCTTGCATCCAGGAAGC
GACCATGTCGCTGTTCGGGAGGAATTCAAATAATAACAACGAAGACGACAAAACGAAATT
GGAGAGAAAATTATATGTCGCCAAGGAGTCGCCTGAGCCAGAATTTGATCTCTCTGATTG
TAATTTGCGTCAAGTACCGTCCGGGACATTCTCTATTTGTAAGGTGTACAGAAAAGAATA
TTTGTATTTACAAAACAATGATATACATTCCTTGGATGAAGGTGGGCAAATATCTGATTT
GTATCTTATTAAAGTGCTCAATATTAGTAGTAATAAATTTTCTCAGCTCCCTGGTGGTAT
GAAATATTTGATTAACGTCACAGAACTATATGTCCAAAACAATTTGTTGAAAAATATAAC
AGAGAACATTCAATTTATGGAAAATTTGCAAATATTTGATGTATCTAACAATAAGCTGAA
ACACCTTACACCTGTTCTTGGTAAATTAAAATGCTTGAGAAAGCTCAATGTAAGTGGCAA
TAGAGACCTAACAGAAATTTGTCCTGAGTTATGCTTTGCCACAAATTTGGTCTGTTTACA
ATTAGATGTGGATCATATTACTTTTCCTCCAGAAGAAATCTGTTTACAAGGCACAAAAGA
AATAATGAAATTTTTATGTACAAAAATGAATGTGGAGTATTCACCAGCATCAGAAGATAC
TGAAGTATTTTCAACTCGAACATCAAACTCATTAATAGATCCCTTTGCTAAACAACATAG
TATAACTTGGGAGCAGCAAGAAGCTTCTATAATAGCACAAGAGAACAGAATACATAAAAT
TGCTAAAGAACAAAGAGAAAAGTTCTTGTCAAAAGTTGTACAGGAACAACTAGAGTTGGA
CTCTGAAATAGCCAAAGTCCATGAACTGAGAGAGGTAGAAAGACAAAGACTGATTAAATC
TATTCAAGATGATGAAAAAGAAATAGAATGTTTAGTTAGAAACTTTATACAATCTGATAA
TTTGAAGCCAGAAATTGTTCAGCAGCAACTAGCTCATGAGCAGGCGGAACATGATAGACT
TCTAGAAATAACAAGACAAAATTATGATAATGTTAAGAAAACTGATATCTTGAAAGCCAT
GGAAACACTCTTAGAAGAGGATAGTGCCATTAAATATTCTAAGAAACATTATGAGGATTC
TTTGAATAACATTAAACAGAGCATGTTGATGCAAGATGCAGAGATAGCTGATAAAGTGAA
AGGTCTCATCAAAGCTAAAGATCAATCTAGAACAGTGTTAGTACAACAGTTTCTTGAAGA
TCAAGATATTCAGAAAGCACTTGTTGCTTCATTACTAGAGAGAGTTGATGCTAGAAGTTG
GAGTTTGAATCAAGAAATAGCTTTGATATCTTCTCATCTTGCCAGACTCAGTGTTATAGA
ACAAGAGAAGAAAAAATTACACATTTCATACAACTACAATGAACTACTTGATCAAAGACT
GCATCTTGTAAACTTACTGGATGACCTTTTCAAACAACAGAATAAAAGGCGAAATCAATT
AATTGAAACAATAAAAGATATGGAAAACGAAAAGAGTAAAACAACTGATTTTTGGTTGAA
AAATTACCAAAAATTAGTAGAATCTGCCCCAAAAACATTGTTAGACGTTGGCAAGTCATT
GGATCCTATATTTGCTAATTATTTACTAAAAATGGCAAACAGTGTATAACACCTTCTTGT
AGTAAATAATTAGC
(1814 bp)

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