SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp100751_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DEAD-box_helicase_Dbp80_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:10.00 TPM:8.41
ORF EntryO_TrvaMG24842_complete:A_TrvaMG_comp100751_c0_seq1
Sequence
(Nucleotide)
TTTGTTTTCAAGACGTTTTCCTTGTTTTTTCGGTTGTTTTCAAGTGCTACAGTTTTATAA
GTGATAATTGAAAATTACTTATCAACAGATAACAATTAGTGTAAAATTTAGAAGGTTAAG
GATTTTCAAAACAATAATCATGGCACAGTGGGGTCAAAAAGCAGAAGAGTTGGAGATTTC
AAATAAAGTTGCAGGTTTGGGCTTAAATAAGGATCACAACCAAACAACAGATTCAGATGA
TGCGCCAGATTCAGCTAATGCTGCTGATACATCTCTGTTAATGAAAATTATAAGACAAGG
ACTTGTAGAGTCAAAATTAGATATTGAAATCCAGAGAAAGGATCCAAATTCTCCATTATA
TTCAGTAAAAACTTTTGAAGCATTGCATTTGAAGCCAAATTTATTGAAAGGAGTTTATGC
CATGGGTTTTAATGCACCTTCTAAAATACAAGAAACGGCACTGCCAACTCTTTTAGCAGA
TCCTCCTCAAAATATGATAGCACAGTCACAATCAGGAACAGGAAAAACTGCTGCATTTGT
TTTAGCAATGTTGAGCCGAGTTGATTCAACTAAGAATCATCCACAAGTATTATGTCTTAG
TCCAACATATGAGCTTGCTATCCAAACTGGTGAAGTAGCTGCTAAAATGGCAAAATTCTG
TCCTGAAATAAAATTAAAATATGCTGTTAGAGGAGAAGAGGTTCCAAGGGGAACAAAAAT
CACTGATCACATTCTCATAGGCACTCCAGGAAAAATGTATGATTGGGGTGTCAAATTTGG
AATGTTTGACATGGGCAAAGTTAGAGTATTTGTTTTAGATGAAGCAGATGTGATGATTAA
CCGACAAGGGCATAAAGATCAATGCATTCGGATTCATAAGTGTTTGTCATCAACATGTCA
AATGATGTTTTTCTCAGCAACTTATGATACTGAAGTTATGGAATTTGCTGAGATTATTGT
CCCTAATCCAATCATCATAAGATTATTAAGAGAGGAAGAATCATTAGATAACATTAAGCA
ATATTATGTAAAATGCAAAAATGCTGAAGACAAATACAAAGCTATATGTAATATTTATGG
TGTAATCACTATTGGACAAGCCATCATATTTTGTCACACTAGAAAAACTGCCAGTTGGTT
GTCAGAGAAAATGTCAAAGGATGGTCACTCAGTAGCAGTTCTATCAGGTGAATTAACCGT
TGAACAGAGAATTGCAGTGCTTGATCGTTTCCGAGCAGGTCTTGAGAAAGTTCTGATTAC
AACTAATGTTTTATCTCGAGGCATTGATGTTGAACAAGTTACACTAGTTGTAAACTTTGA
TATGCCAATGGATATGAATAGAAAAGCTGATTGTGAAACATATTTGCACAGGATTGGGAG
AACAGGAAGATTTGGTAAAGCTGGTATTGCTATTAATCTCATTGATTCTCCACAAGCTAT
GGACATTTGTTCAACTATTGAGGCACATTTTGGAAAGAAGATCCATCTTTTGGATATTGA
AGATGCAGAAGAAATTGAAAAAATTGGAGCTTAGGTTTAAGCTTTTTAATCACATTAAAT
GTGAGAAATGGCTAATATGATGCAGAACAATATTAATAACATCTCAAAATTAAATTTGAT
ATGCTTTATTAAGAGAATGCACATGCATAATTACTACTGTTGAAATAAAGTTTTCATAAT
AAAAAAA
(1687 bp)

- SilkBase 1999-2023 -