SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9952c1_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101744275_isoform_X3_[Bombyx_mori]
Ontology
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0009953 P dorsal/ventral pattern formation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030282 P bone mineralization
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.97 TPM:2.91
ORF EntryO_TrvaFAMAMG11047_complete:A_TrvaFAMAMG_TR9952c1_g1_i3
Sequence
(Nucleotide)
TCTGAAATTGAAGAAAATAAGTGAACATGTGCTTACAATAGCAAAAAAAAAGCATAAACC
ATTCTTTCATAAATATCATCATGTATTACGACGAGGAAGATGATAGATACTTTAGTCCAG
ATTTACTTCATGTTGTTCACAGCCGCATTGCCATTATTTCGAACTTCGGACTGGCTCCGT
ATGGTATTCGGAGTGTCCCCACAAAAACTGAAGATGGAATACCGATTCGAAAACTCTACG
TTACTAACTTACCGCCCAAGACAACTAGAACAGAATTATATGGCGTATTTGCACAGTATG
GTTTAATCAAAAGCTGCTGGCTGAAAATGGGTGAAAAAGGTGCTAAGAAATCATCGGCTC
CAGCTTATGCATTTGTCACCTTTACCAACCCTTCAGATGCTCATCAGGCTCTTGAAGCAC
CTAGTCATGAGAAAATATTGCGAGGTAGAAACTTGTACACATCACCAGCTGACAGTTGGC
ATCAACCCGTTGAGGACTCTGATGGCCGTGTTTGTTGGAAACGAAGATTCCCTCGGAGTC
CCTCAAATAACATTTCTAAAAGTTCTGAAGAAGCAGGAACTAGCAGTGTAGCATCAACTT
TTGCAACATTGGAAACTACAGAGTCATCAGATGAAGAAGATGAAGTAAGAAGTTGTACAA
TACTGGATATTCTAAATAGAGATTGTTTGACATATATTTTAAATTATGTTCCTATTAGGG
ACATAATTTTATCAGAAAGAGTCAGTAAAGGGTGGCAAAACATGGTTCAGGAGTATTTAT
CAGGCGTGCGCGTGCTGAAGACGTCGTGGTGGCAGGCGGAGGCGGCGCGGCTGACGACGG
CGGTGCTGCGGCGCGTGCTGGCGCGGGTCGGCGCCTCGCTGCACACGCTGCACATCGACC
ACCACTGGTCCGCGCTCAACGACCGCACCGCGCACTCCATCGGCAAGTTCTGTCCCAGGC
TCGAGGAACTTAAGGTTGTTGGCATGCACACAAAAAATTGGAATCCACTACTGTATGGAT
GTAAAAAACTGAAGAACTTGTCATTTATATCTTGCAATAAGCTAACGGATTCGACGCTTG
TACACCTCGTCAATTACGATTCGTGTATCGAGAAAATAACGGTCGCCAACAACACACATG
TTACGGGACTGTTTCTAACGAGTGCCAACCCTGCCAAATTAAATTCCCTCTCCTTCTACA
ACTGTTACAGTCTTCAAGGAACAGTTCTCAGTGCCACCATGGAATCCCTTCCACATTTGA
CAACCCTAAAATTAGATCTGTGTCCAACATCGATATGGAAAATCACTCCGTTAATTTTAA
AGTCATTACCGAATCTCCTGGAACTCTCTCTCAGTGAATACATGTCGAGCGATATCTGCT
TCTCGTCGGATAGCAATGACGACTTCTGTAGTGCACTGAGTCGCCTCACTGAATTGAAAA
CATTGAATTTGAGCAGAAATATACACATAACGAACGCAGTTTTGAAGCAAATAGGACAAA
CTTGTCATAAACTGGAGTCTTTGAATGTATCAAGCTGCAATTCAAGAAAAATATTGTCCC
AACCAGGTGTGAACGATGAGGGTCTGTCGTGGGTGTGGGCGGGGTGCAAGTGGGTGCGCA
TCTTGGACGTGTCGTACCTGGCGGGGTTGCAGGGCACCGGGCTGGTGGGCCCGCAGCGCC
TCGAGCGAGTCATAGCGCGCGGCAACCCCGCACTCACTACCGAGGCGGCCGTCTCACTGC
TCGCCACCTGTCCACTACTGCAGGAATTGGATATGTGTGGTTGTGATGGAGTATCAGAAG
AAGTAGCGGAGGCAGCTATCAACTCAGTAAATCAACATCCGAGACATTTACAGGTCTGGC
TCGCGGGAACCAGCGCTGTACTATCACAGGAAGAATTTCCTAAACATAAATTGTTAACGT
TGAACGTAACTGATGATCTATGTAACCCGAATTTGAGGCCGGACTTTGTGGATCGGATAT
TTGGCAACAGTTCAGACGAATCTTATGACGACCTTTACGATCAAGAGGACTTCGACGATT
TATTTGGATCTGATGACGATTTATTCCTGGAAGATGAATTGGATGATTATGAACAAGCAT
TCTTTATACCACCATAGACATCGGCTAGACATATTCACATTTAAAAAGCTATTTGTATTT
CATGCCTTACACAATCATTTTTTTTAATTTTCATTAATCATTGTAATTTTATCATCTAGT
ATGTATGAAACTAATTGTCGAAATTCATAATTTTTTTTTTCATTGTATATTTTTTTTATT
TTTCTTTCTAAAATCTGATACAATAACAAGAAAATATTTTGGTGATTATGTTTATCCAGT
TTTCCACTTTGTGGGAAAACATACTTTCAAAAACTAATTGTTTTAATTTATTTTTAAAAA
GTATAGTAAACACTCGACAAGGTATCTTCCATTCAAAAGTTATTACAATATTTTCGTAGC
AAGTTTTCGCCTTTTCTTTTTTAGTTTTTAATATTGTAATAAGTGGTGTGTTTGATTTTT
CTTTTAGGTTTTAAATACATAATTATGTAAAGTATGATTGAACTGAGTGTAAATTTTAAT
TAATCTGTGATTCTAGTTTGAATGTTCCCTTAAATAATCAAATTGTTTACAGAATTTATA
TAAGCTTCACACCAATTACTATTTGAAGTCTGAAAGCAATGTGATAGAAATAATATGGTT
CTTTAATGAAAACCACAAGCAAATTGATTACTTACATTACTAATATCCAGTACCTATAGC
ATTGTTTTTATTATATAATTTGTTGTACTTAATAAGTGACAGTATAAAGAAGTTTTATAT
ATTAGAAAAACATTAACCAACACTAATAACTGTCAACCCATGTTAAAAATTATAGGTAAT
TGCTATAATAAAACGAAAGCTTTAATTGTACTCTGGAGATGTAACAAAGATGATGCATTA
AGTTTCATTTGTTTTACGAGAAAATATTTACAAAGGCAATTTTGCAAAGAATATTTGCTT
GTTTCAACAAAGTCCCTTAAATTGCACATGTGTACATCTTGCTGTTGCTAGGACAGTTTG
ATAACATTGTTTTAAATATAACATTAGCTTTAATATACAATAATTAAAATGAAATATGTT
AAATGTAGAATGTTAATTAGTTTATATTTTATATTCTCAACTTGGAAATGTGATATTGTA
ATGAAAACAGCTTGTTTTAATTTCCATTGGGATTTCTTTTTCATCATTATGCTCATTGTT
TTTCTTTTTATGATGAATTCTTTGTCAGTTACATAATGTTACTTTGAAATCATTTTATTA
ATTAAATGAGGGTTTG
(3316 bp)

- SilkBase 1999-2023 -