SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9946c0_g1_i12
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_queuine_tRNA-ribosyltransferase_[Amyelois_transitella]
Ontology
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008479 F queuine tRNA-ribosyltransferase activity
GO:0008616 P queuosine biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.65 TPM:0.64
ORF EntryO_TrvaFAMAMG11025_complete:A_TrvaFAMAMG_TR9946c0_g1_i12
Sequence
(Nucleotide)
GCTAATGCATCAAAAATAGTACGTTGTGATTATATTACAAAAATTGCATAATCTATACCA
CATTTTTTATTTTTTAGGTTCTGAATTCAACCCTGTCGTTAAAAGAATACGTCAAAATTA
CTAATCTGTGACGTTAAATGTCAAATTAATGCTAGTCTTCCCTTCCGAAACTCAGACTTC
CGAAACACACACGAACAGAATTTGTATTGTTAATTGTTATTAGGATTTCGCAATTTTTAA
ACAAAATATCCATGCTTGCAACAGAGAGTAAAGCCGCAACCCCGAACACTTAAAGTGGAG
AATAGAGCATAAATATAATTTTTAAAACAATATGAAGACAAAACCAACCGCATTAACTTT
TGATATAAAAAGTGAATGTAAAACAACTAGAGCACGCTCTGGAGTTATGCATTTACCTCA
TTACGATGTGAAAACCCCGGTATTTATGCCCGTAGGAACACAGGGAACAATGAAAGGTCT
TTTGCCCCAACAGTTACAAAATTTGGATTGTGAAATAATATTAGGAAATACATATCATCT
AGGAAATCGACCAGGAACAGATGTTTTACAAAAAGCTGGGGGTTTACATAAATTCATGGG
CTGGGATAGAGCACTTCTTACTGATTCTGGTGGATTTCAAATGGTATCACTTCTTCAGTT
AGCAGACATTACCGAAGAAGGAGTGAAATTTAAATCACCTTACGATGGATCAGAAACAAT
GCTAACTCCAGAAAAATCTATTGAAATCCAGAATACAATAGGTGCTGATATAATAATGCA
ACTAGATGATGTAGTACAAACCACAAACCAGAATCATGAAAGAAATCAAGAGGCCACTGA
AAGGACAAGTCGTTGGCTTGACAGATGTCTCAGAGCACATAGAAGACCTTCTGAACAAAG
CATATTCCCAATTGTGCAAGTGGAGGTGAAGCAAAAGATGATTTCTGGCCAATGGTCAGT
CTAAGTACAGGAATACTAGACAAAAATAGACCGAGATATCTGATGGGTGTTGGAGTTGCC
ATAGATATTGTAATATGTGTAGCTCTTGGAGTAGATATGTTTGATTGTGTCTATCCAACT
CGCACAGCAGTAAGTTATTTTATTCATCAGTTATATCATTAACCAAGCTGTGTTGTACAA
TATTTGCATAATTTCAGAGATTTGGATGTGCACTAGTCAATATAGGGCAGTTGAATTTGA
AGCAAAAAAAATATGAAACCGATTTAAATCCAATTGACAAAGATTGTACTTGTTCTACAT
GTCTGAATTACACAAGGGCTTATCTACATAATATTGTAACTGTTGAAACCGTTGCTTGTC
ATCTGCTGTCTGTACACAACATTGCATATCAGGTATTAACAAATATCATACAGTAATGTT
AATCTACAAGTTATTAATGTGAAATTCTCTTTTTTTTGTTAAGACTTTAATTTACTATTT
CCTATTTTCAGATGCGTCTTATGCAGACAATAAGAGATAATATTGAAAATGGCACATTCC
CAAATTTTGTAAAATGTTTTGTGGATCAACTGTATCCTAATAGCCAATACCCAGCTTGGG
TTGTAAATTCCCTGGGCTCTGTTGGTATACATTTATTTTAGATTCATTTTAGCACAATAC
AAAAGCTTTATAAAATATTTTCTAAAAACAACATGTATTCAAATTCTGGACTGTTTATAA
CATTTTTATATTAAGTTTAGTATTAATAAATTATTTAAAATATTAACCTTTGTTTCCATT
TCTATTACTTTTAGATGCTATTGATAACTCAAAATGAGATCAAAAGTCTACTACTGGATT
TATTTATTTTTATTTGTTCAGCTTCATGCACAAATTGGTACAATTGCAGACTTGTTGGGC
ATCATCAACAGTTTTATTTTACTGAATCTATTTCTGATTGCAATCCATAAACAATAGTAA
TCATTAGATTCTACAACACAGTCCAATTGATCTGTTACCATCCAATAAGAATAACATTTT
TAAAATCTTATCAAAATCCACTATAGATACAGAATAATACAGATCTCCACAATAAACAAA
GCTATGAGTTTATAAATTAACATTATCAATACCTAAGCTTCTCATCAGGCCAGCTTTAAC
AAATTCATGTTGAATGAATTCATCATCCATTCTCCAAAATGCACAATATGGCTGAAGAGT
TACTCAAAATCATTCCACCAAATAATTATTTTACATTATGCATATCAGCCAAGTGTTGCA
AAAGATATCAAAATTAAATGCTCTGTGACATTAAATTAAAAAATGACTTTGTATTTAAAT
ATTTGTCACATGAAATCATCTGAGTCGTTGCCATCCTGGTTGGTAGACATGTTTTCCGGT
TTCATCAATGTGGAATAACTTCGGAGTTCTGCTTCCTCCTTTTTTCGCTTTTCTTCTTCT
TTTTCTTTCTCTTTTTTCTCTCTCAAAGCTTTCTTTTTATCTTCTCTTTCTAGCCTGTCT
CTGTTTTCTCTTTCTTGTCTCAGATCAGGAAAAGATTCTACCTTTGTTTTATTCAATCTG
TTAACGATTTCATTGATTCTTTTAGCAACCCTTACTTTCCTCACTTCTTTATCTTTATGG
AAAGCCACTTGTCCTACCTCCATTCCAGCTGTCTTCTTTAGGTTTGACCACATTGTATAA
ACTATGTCAATGTCATTCATTTTATTTCCTAATATGGAATTAGCTTTAACAAGCTGGCAA
GCATCATCCAGTACTGAATTTGGTATGTCATCAATGGTTTGACCAGGACCAAGCCGCAAA
TACACATGTGCAGAAGACACTTTATCTACATGGAACCACACATCTTCTGGCCAACCCCAT
TTTATTAAATCTTCATTTTCGTTCTTGTCGGCTCCCATAAATAATGTCACTGAAGGAGCG
ACAACATTACTCGTGAAGTAAAACACCATGCTATAAGTTTCGTCGAGCGAAAATCTGAAA
TTTCGTTTTACACAAGCAGGAGTTTATAAAATTAAATAACAATTTATAAGTATAATGTCT
TTAAGAAAAATATTATTAGTTATTTAAAATTACAAATTTACATGAACGACACTATTTAAT
ATTTTTTTAGGTTATTTTTTTTAAGTAGCCGAAGACTAG
(3099 bp)

- SilkBase 1999-2023 -