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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9942c1_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:3.11 TPM:3.05
ORF EntryO_TrvaFAMAMG10970_complete:A_TrvaFAMAMG_TR9942c1_g1_i5
Sequence
(Nucleotide)
CTTGTATTTTTTAATATGACCTATTTATTTATTTATCTGTATCTGTTTACATTGAAAACG
AAAAATTGCACATTTCTTTTACAATCTTTCTTAATCATATTGTAAACAAGCTGTATACTC
TAGTAACCGATGGCCGTACATAACTTAGCAAAAACAGAAACCCTTAAAACTTTTTTTGAC
AACTCAAATCACAACTCAAGTTGTTATGGAAATTGTGCAACAAGCGCCGTAAAATAAACC
TTATCTTAGTGGATTAAGTACTCTATCAGCTGAAAACACGCTAAGGTTTAATTTCCCTAT
TATTTTCAAGTGCTTGCGTGCGGCGCGGGCGGTCAGTGAAGAAGTTTGTTTAGTTCTTTG
ATACATTTTCTCGCATCAATATCGAATAAAGTGACTATTGTTAAACTGTGGATTAAATAC
TGTGAAGTTTTCTAATTATTTACTGTTGTTTGTTATTGCTGCCAAGTTTTTCGGGCCCTT
GACTGTGCAATCTCTTATAGTGTGTACACCTGTCGCCGGGTCAGCGGAACGGAAAACGTA
GCTATGGACAGCGATTAGGCTTGTCCAGCGATATCCCCGAACCAGAGGGCCAAGGGAAGC
GGACAACAAAATGTGACCACCGACCAAACAACCAAAACGAAATACAAGCATTATATTCAT
GAATCTTGCAACAGGATTACATGATTGCAGCCTTATTTATATGTACTTATAATTAAACGA
ATCTAGTCGCAATAGCACTATTTAAGGAAGCAATTTAGACTTTATTATAAGAGAGATAAG
ACCGAAGTACAAACGAGAGAGATGTACAAAATCTGAGAGCGCTAATGTTGATTTAAACAA
TAAATTGATTTGATTAGAAGTTCCCGGACACAAGCAGAATGTCTACAAGTTTCGAGCACA
CCGCCATGAAGAGCAGTTTCTCGCTGTCGTCACTGCGTAGCGCGCCCGCGCCGCCTGGCG
GACAATGCGATCAACTAGAACGACCTTATCACAGCCTCACCAAAAAGAGAAAGGAGCCAT
GTCGCGAGGCGTGGCGCCGCAGTTGGGGCTCCACGGCGAGCGGCGGCAGCGCTGGTGATG
ACCTGTGGCCGCTGCTTCAACGACACTACGACTACATCATGGACAATCAGATCATAGACA
CTTGCAAGGAAGCAAACGGCGAATTACTATCGCATAATCCGTCAGCTTTGCTCTCCGGTC
CGTGTCTGCTGAACCCGACCTCCGGCATCAACCGGCAGTGGTCTTTGAGTCAGCTCGTGT
CGGAATTCGACGAGCTGTGCCAGTGGCTCACACATGTGCAGGAGGAAATATATTCTAGTC
CCGAGAATTTGTCTAACTGGAAACTTAGAGCGACCCGCATGTCAGAACTAGTTGCGGTAG
AACCTCGTCGTGCAAAGTTCGTTGAACAGGCCAATGCTATTCTGGAGAGGATCCCTGAAG
CCTGCGGAGAGGTCACTTGGCGAATCGAACATTTAAGGATCAAGTGGGAAGCTCTCCGTC
TTTTACTGAGTCCAGAACCAACACATAATGACGGCGAAAATATCGATACAGTCGACACTG
CACACGAGCTCCGTTGTCTCCGTAGATGGCTGCACAGCATGGAAGGTCGACTTCCACCAC
CCTCGCTGGCTGCAGCACGGTCCGCGTCACATCACGAGCTGCTCAGGAAATTGACTGAAC
ATCAGGTATTACAACGCGACGTGGAATGTCACGGGCGCATCGTGAGCTCTGTGGTACGAC
TCTGCCGGGGCGGTGACGCAGCCCGAGCTTTGGAACGACGCTGGCACCTCCTATACTTGA
GGGCCATCGAGTGGCAGTGCCATCTTGAAGCCTGTCTCACTAAGATCAACACGCAGGGTG
GAGTAACAGTAGAAGCTGCAAGTGACAGCGACGACGAACCTGCTCTCAAACTACCTAGAC
TCAGCAAAAAGGGCTCTCCAAGAAGTCCAAGGATCCCCAGGAGTCCACGACGACAACGAA
CGCCGGTCAACGCTCGCTGTAGGGAAAACTCTACTGACAGTCGACAATCCGCCTCAGAGG
AGGAACAAGAATATGTGCTGACGTACACGTGGAGAGGATTCGGCTCGGACTGTGAATCGG
AACTGATGAGGGAACACAGCAACATGGCGGACGAGAGGAGGGTACCGGACTCGGGCGAGG
ACACCGACATGAGGACCACTGACCAGACCGTGCCTGTTACTATTGACCAAATTGACGGCC
TCGACATAAGCAACGCGGTAATGATTGAAGAAAAACTAAAAACCCCACCAACAGTAATCA
AAAGGAAAAAACCAGTCGACACATCGAAATTTAATCAAACAGATCGGAAATCCAAACATC
TTGCAATCTTCTACTTCAAACACCACGACACAGATTCAGACAGGCAAGTTATTGAAACGG
ACGAAAAGAGTCAAGAAGAATCTTCGGAAGAAGAATGGACTTACGTTGGAGGCAAAATAG
CCAACGAAGACTCGACTGATCTGATGACGTCATCCGTGGAAATACAATGCGAACTACCCA
TAGACAATCCGAAAGATAAACCACCATCTCCAAAACCGAAACTGGAATCTTCTACACCGG
ACCTACTTAGAGTTGAAAACACAAGATGCAAAGACATAGAAAGACTATTTAATCAAGCTG
AAGAAATGGTGCACAAGAAAGCAATGGCAAAGAAAAAAGGTATAAGGAATTTCAAACCGT
TGAGCTTAGAAGAGGAAGGGAAAAATGTCAGCAGAAACAAAATGTCGAGGATCAAGGAAT
GGCTAAACCAATCGGATGGAAAAAATGACAATAATCAAAATACGGAAAGCTATGACGCAT
CAGGGGAATACACGACGGAAAGCGAAGTGGACACATCGTTAACATCTGAGGAACGGAATC
TACACTCGTCTATGGATATGAGTACATCTACTTGTACGGTCACACCCACACATCATGCTA
AGGGTCACGTCTCAAGTACCAACACAATGACAGAAGCTTGCACATCCTGCGTCGAAGCGA
ACGACAAACAATGTTGGCTACGACGAAAACGTTTCAAACTCCGTCGTCACAACACGCCAC
AACATTCCAGGAGAGAGAGGCTGGTCAAATCTCTGTCGTTCTGTGGAAGACTCAGCCCTG
AAATTGAAGATAAGAACGAAAGAAGTGCGGCCAGTGATCCCGCTACTAGGAAAAGCAGAT
TCGACACAACATCAACATCAGGCAACGACAGCGACGAAGAACTCATAAAGCAACAACTAG
CGGCAATGGCGAACTTACGTAAGAGCATCGAAAAGACGCACATATCCACTCGCGAAGACA
GTGCCATTCCCGAACAAAACGAACAGAATGACCCAGAAAACACATCCAAACCGGACTTCA
AACTTGGCCCAGCAGGTGGAACTGTTAGGCCAAGGTTAGCTAGAAGCTTGGAGAGAGAAA
GGAATTTCTTGGCACTGAGTCTTGGTGATCCGAACCAGCTGTGGGATTTGAGCTTGGATA
AAGATTCGGATGTGGATAAGAGTGTCACTGCGGGCACAGAGGAACATAGTTCGTTCTCGG
AACAAGCATGGGATTTCTATCAGGAAAAATACAACTCGGAGCCGTATTCCGAAGCTCCCG
ACTCGGACGCCGCGCGACGCCTGCTCGAGTTCGGCGACGACTACCGCGCCTTCCTCGACT
CGCAGTCCGACTGCTGCTCCAGCCTCTCCGCACAACCCGAGCACGACATCAGCCCCAGCG
GCACTCGCAGGAGGAGACCTCCCTCCGAGATGTCCAGGGAAAAAAGTCTACCTCGACACA
AACGACCGACCAGGACTTCCCCGGTCGAAACACCGACCAGAAAACCCAAAAAGTCCATGA
TGTCTAGCGCTGAGCGCAAGAAAACACTACTCGACAGCCTAGAAAGATCTAGGAACAACA
CCAGCCTGGAGAGCAGCGACGGTGTCCGACGCAGGAAGCCCTCTGACATCAAGAAACACT
CGCCCGAATTCGATTTACTTAACGTGCAGGCTCTGAGTCGACGCCGACACAGTTCCAACA
TGACCAGCGACGAAGTGAACAGCTCGCTCGAGTACACAGAGGTCAACAACCGGCCCGACA
TACTCGACTCCATAAACCGCCGCCGTCGAACGGAGAAGGACGGCGAGGCGGAGCTGCAGA
AGGTGGCGCTGAGCGAGCTGCGGCGGCGCTCCACCGAGAGCATCGAGTCCGAGGACGAGT
CGTCGTCGCCCAAGAAGCACGGGCGCTGGAGCGAGTCGGAGTCGGACTCGGAGGAGGTGC
GGTCGCTGGTGCGGCGCTCGAGCTCGGCGCTGGAGGCGGCCGAGGCGCTGCTGGACCGCC
ACGACGCCTTCGACTACACGGAGGTCGTGACAAGATGTCGCGAAAATATCAACCTACTGG
AAGCAAGTTTGGCCGGTGGGTCTCTCTCCCCGACGTTACAGCGAGATGTTAGAGCGGTGT
CAGCCCGATGGTCGGCACTCCGCGTGGCCGCCACTCGTCGTGGTGGAGCCAGGAGACTTC
GCAGGGAAATGGTAGCTCTTCGGGAAGCCCTCGACGACATCTGCGACCCTGCTGAGAGCG
CTCCACAACCACACACTAGAGCCCAGCTGAATCGTCGCATCGAAGAATTAAAGGATCGCC
TCTTACGTCTTCTAGAATGCAAAGTGTCAATGTTGAAATTGACTGTGTCCGTACGTAGAA
CTCTTGGTGAAATGGAGTCAGACGACAGCGGTCTTGCTACTGATTTATCGACTTTGTTGT
CTTCGTGGGATGACGCTCATCAAAAAACTTCCAACGAACTTCTATCGTTGGAAAAGGCGA
TTAGCGCCTGGGCTGAATGGGAGGGTGCACTCCGCGAGCTTCAAGGCGAATTGAGAGGGG
ACCTCGCCACTTTAGAGGCACTTCGTGACCGAGGCACAACTGATGGTGATCAGACAGATG
TCACTACGCAGATCAAACAGCTTGCTGCCTCTCTTATAGAGAAGAAAAAGGGTAGTTCAA
CATGCGATTCCCTTTCCGATTCCGGTATATCGGATGGCGACAGTGAAGGGGTAGGTCGAC
GCGCGAGGCGTTTGAGTGCTCTCAGAGAATTAGCTCGTCGGCTACAAGCCACTCTAGCAC
CTAATTCCCCAGCACACAGGGCTATTGCCAAGCGTATGGAGCAAACAGAGAACGAAGTGC
GAATTTTGCAGGCGTCTTGTAAAGCGCTTGTTGAACAGAATATACCTGAACTGAAAATCG
ATGATGACATAGACAATAGCCTCAGCCCAATAGCGGGCAGCAAAACAGGTTCAGGCGATC
CTGACTACAGTCCCCGAGGGGGTTGGGTGTGGCGTGTACTACGGTCGTCCCTTCCCATAC
AACTATGTCTTGTGGCCTTACTGTTGGCCGCGTGGTTGGTCGAACGGCCAAGGTGTTGCG
ACGCCTTAAACTCACTCGCACAATCATTAACTCCTCAGTTAAGATACGTGAGAGGACCGC
CACCAGTGTGAAAACCTCAATTAATAACTTTGAGGTCAAATATATGACATAGCATGACGC
TCATGTCCAAGTTTTACATTGTTAGACAATACTTTTGTATGATACATGTGTATCGCGGAC
TTTTAAATCCTTATAGAAGGTTTAGGCTACCAGAAGGTAAAATACATACAAATAGTATAT
GACAAACGCACGCGTGGCTCTCACGGATAGGAAACGTCATTTTGAGAACATTTCAGAACA
CTGTGGGAGCGAGTGTCGTTACTCTCAATACTAAGTGTGTCAGAGTGAGTTTAACTAAAA
CTGAGGTACATAAGTCTTCTGGTAGTTAATATTTTGTGGTTTAGAAAACTATTTGATTGA
CATCTACTAACATATCGTTAAAGATAATGACAGATAAGACTAAGGTGACTTCGCTAACGA
TATAAGCGACATAGAATCTGCTCATAGCAAAAGTTCAAATAAAGTGTTCCAAAAACCGTC
TGTATCAGACGAAATTCAAACTAGGTAATCGTATTTTAACATCGATTTTATGATAATACT
AACACATAACTTAGGCTAAGAAGCATGCCTAACTTAGTACAAGTATTTTTTTAGATTTCT
TATTAAGATAAGAGTGCAAGTGTGAGTGATCTTTCTAAAGAAAAATACTACTGTTTTCAA
GTTTATTTCGGATGTATTTCTATAGAACTGTAATATGGGAGACATTTTTTTTTATTCCCA
TGACGTCACTGCACAGTATATCTCTTAAAATAGATACTATTGCTCCGTAAAAAAGACTGA
TAAAAGAAAAACTTCAATGTTTTCTTTCCATAAGTTGGTCAAACTGTATTGCCATTAAAA
CTAGTACCTTATTTATCTATTAATTTTGATTCATATAGTTAACTAACATAAAATGCAGTC
ATAACTAAAAATGGTTAAAACAACATATTTTTGATATAAAGAGGTGTTTTAGCTACTAAT
ATTTCAAAATAAAATTAACGTGGAAAGGAAGATATGAGAAGAAAGTCTACATAAAGCTAT
TTTATCAGTCATTATTAGTTATGACAGCAGAAAAATAATTAAGTTACTAGAAACATTGTT
TTAGAAAATCCGAATTAAATATTTTAACATCAATTTACTTTATCGACGTACCATAGGTAT
AGATAAAAGGAAAATCTGTTATTTTTCCATTCTGAACTAGTTAAACTAGCTAGTATGTCC
GGTACTGAAAAAATATGCCAGAAACATTGTAATTTACGTTTTAACATAAATATTATATTA
TTTATTTCTGTATTATATTATCGCTCTATCATGTAGAAAAATCATGGTTATCTGTCAATA
ATTGTTGTTTCTTTTCACTTTATTTGTTAAATACAAGCTTGCCAAAATTATATATTTTTA
AAACAAATGACACGCAGCAAGCATATTTTAAACGACGTTATTAAAAAAAATATTTCATCA
AAAATTTTGCTTTACTTTGATAACTAAGAAGAAGCTTTCAACAATCAATTATTGCTAAAA
AGGGGTCTCTAAGTATAAAAGTTTGGAAACCTCTGATTTACAAATAATTCATGATTTTAT
TATGTGTAGATTGAAGTACCGACATTCTTTAATATTATATTATAATATTTATTGTTGGAT
CTATTTAATTTTCAACTGAAAATTGATGACATTATTTTACCTACTTGTTATAATTTTATT
TAAATTTATTCGAATCATGTTTTAATTCAATTTAATTGACATTTTTTTTTTAATTAATAA
CTATTAACAGTTAAATACAAAATAGAGGGTGTGAACGGAAGATATTCTGAGAGTATTTTA
CTAAAACGCTCAATGTGAAACTGCCTTATAACGTGTGGATGTGTGAGTGACTATATTTAC
AACAGACATTGTAGTCATTTACCTACAATGTTTGTTTCTAGTGACTAAGTTATCACTCCG
CTGCAAAAAAAGAAGCCAGAAATGACAATATAATAAAAAAAAAAGCAGCGGTGTTGATTT
TGTGAGGTTATTTAAGGCAGTAATGCCTCTATAGTGTGTCATATTTCTTTTAATATCATA
ATTTACTTAGTTAATGGCTATAATTGAAAGAAAATAGACATGCTTAAGAAGTGCATTTAA
TTTTTCGTTCTTCGAGATGATGTGAAGGCATTTTTAAATAGGTTGCGTTGTGGCATGTTG
GCTTTTGGAATGGAATAAAAAATAATAAATTAAAAAAAAAAAAAAAAAAAAAAA
(7674 bp)

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