SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9942c1_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101740250_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:5.37 TPM:5.26
ORF EntryO_TrvaFAMAMG10963_complete:A_TrvaFAMAMG_TR9942c1_g1_i4
Sequence
(Nucleotide)
ATTGACAGTGCTTTCCCCTCGTTCATAGCATGATTTATGGCTTGTCCAGCGATATCCCCG
AACCAGAGGGCCAAGGGAAGCGGACAACAAAATGTGACCACCGACCAAACAACCAAAACG
AAATACAAGCATTATATTCATGAATCTTGCAACAGGATTACATGATTGCAGCCTTATTTA
TATGTACTTATAATTAAACGAATCTAGTCGCAATAGCACTATTTAAGGAAGCAATTTAGA
CTTTATTATAAGAGAGATAAGACCGAAGTACAAACGAGAGAGATGTACAAAATCTGAGAG
CGCTAATGTTGATTTAAACAATAAATTGATTTGATTAGAAGTTCCCGGACACAAGCAGAA
TGTCTACAAGTTTCGAGCACACCGCCATGAAGAGCAGTTTCTCGCTGTCGTCACTGCGTA
GCGCGCCCGCGCCGCCTGGCGGACAATGCGATCAACTAGAACGACCTTATCACAGCCTCA
CCAAAAAGAGAAAGGAGCCATGTCGCGAGGCGTGGCGCCGCAGTTGGGGCTCCACGGCGA
GCGGCGGCAGCGCTGGTGATGACCTGTGGCCGCTGCTTCAACGACACTACGACTACATCA
TGGACAATCAGATCATAGACACTTGCAAGGAAGCAAACGGCGAATTACTATCGCATAATC
CGTCAGCTTTGCTCTCCGGTCCGTGTCTGCTGAACCCGACCTCCGGCATCAACCGGCAGT
GGTCTTTGAGTCAGCTCGTGTCGGAATTCGACGAGCTGTGCCAGTGGCTCACACATGTGC
AGGAGGAAATATATTCTAGTCCCGAGAATTTGTCTAACTGGAAACTTAGAGCGACCCGCA
TGTCAGAACTAGTTGCGGTAGAACCTCGTCGTGCAAAGTTCGTTGAACAGGCCAATGCTA
TTCTGGAGAGGATCCCTGAAGCCTGCGGAGAGGTCACTTGGCGAATCGAACATTTAAGGA
TCAAGTGGGAAGCTCTCCGTCTTTTACTGAGTCCAGAACCAACACATAATGACGGCGAAA
ATATCGATACAGTCGACACTGCACACGAGCTCCGTTGTCTCCGTAGATGGCTGCACAGCA
TGGAAGGTCGACTTCCACCACCCTCGCTGGCTGCAGCACGGTCCGCGTCACATCACGAGC
TGCTCAGGAAATTGACTGAACATCAGGTATTACAACGCGACGTGGAATGTCACGGGCGCA
TCGTGAGCTCTGTGGTACGACTCTGCCGGGGCGGTGACGCAGCCCGAGCTTTGGAACGAC
GCTGGCACCTCCTATACTTGAGGGCCATCGAGTGGCAGTGCCATCTTGAAGCCTGTCTCA
CTAAGATCAACACGCAGGGTGGAGTAACAGTAGAAGCTGCAAGTGACAGCGACGACGAAC
CTGCTCTCAAACTACCTAGACTCAGCAAAAAGGGCTCTCCAAGAAGTCCAAGGATCCCCA
GGAGTCCACGACGACAACGAACGCCGGTCAACGCTCGCTGTAGGGAAAACTCTACTGACA
GTCGACAATCCGCCTCAGAGGAGGAACAAGAATATGTGCTGACGTACACGTGGAGAGGAT
TCGGCTCGGACTGTGAATCGGAACTGATGAGGGAACACAGCAACATGGCGGACGAGAGGA
GGGTACCGGACTCGGGCGAGGACACCGACATGAGGACCACTGACCAGACCGTGCCTGTTA
CTATTGACCAAATTGACGGCCTCGACATAAGCAACGCGGTAATGATTGAAGAAAAACTAA
AAACCCCACCAACAGTAATCAAAAGGAAAAAACCAGTCGACACATCGAAATTTAATCAAA
CAGATCGGAAATCCAAACATCTTGCAATCTTCTACTTCAAACACCACGACACAGATTCAG
ACAGGCAAGTTATTGAAACGGACGAAAAGAGTCAAGAAGAATCTTCGGAAGAAGAATGGA
CTTACGTTGGAGGCAAAATAGCCAACGAAGACTCGACTGATCTGATGACGTCATCCGTGG
AAATACAATGCGAACTACCCATAGACAATCCGAAAGATAAACCACCATCTCCAAAACCGA
AACTGGAATCTTCTACACCGGACCTACTTAGAGTTGAAAACACAAGATGCAAAGACATAG
AAAGACTATTTAATCAAGCTGAAGAAATGGTGCACAAGAAAGCAATGGCAAAGAAAAAAG
GTATAAGGAATTTCAAACCGTTGAGCTTAGAAGAGGAAGGGAAAAATGTCAGCAGAAACA
AAATGTCGAGGATCAAGGAATGGCTAAACCAATCGGATGGAAAAAATGACAATAATCAAA
ATACGGAAAGCTATGACGCATCAGGGGAATACACGACGGAAAGCGAAGTGGACACATCGT
TAACATCTGAGGAACGGAATCTACACTCGTCTATGGATATGAGTACATCTACTTGTACGG
TCACACCCACACATCATGCTAAGGGTCACGTCTCAAGTACCAACACAATGACAGAAGCTT
GCACATCCTGCGTCGAAGCGAACGACAAACAATGTTGGCTACGACGAAAACGTTTCAAAC
TCCGTCGTCACAACACGCCACAACATTCCAGGAGAGAGAGGCTGGTCAAATCTCTGTCGT
TCTGTGGAAGACTCAGCCCTGAAATTGAAGATAAGAACGAAAGAAGTGCGGCCAGTGATC
CCGCTACTAGGAAAAGCAGATTCGACACAACATCAACATCAGGCAACGACAGCGACGAAG
AACTCATAAAGCAACAACTAGCGGCAATGGCGAACTTACGTAAGAGCATCGAAAAGACGC
ACATATCCACTCGCGAAGACAGTGCCATTCCCGAACAAAACGAACAGAATGACCCAGAAA
ACACATCCAAACCGGACTTCAAACTTGGCCCAGCAGGTGGAACTGTTAGGCCAAGGTTAG
CTAGAAGCTTGGAGAGAGAAAGGAATTTCTTGGCACTGAGTCTTGGTGATCCGAACCAGC
TGTGGGATTTGAGCTTGGATAAAGATTCGGATGTGGATAAGAGTGTCACTGCGGGCACAG
AGGAACATAGTTCGTTCTCGGAACAAGCATGGGATTTCTATCAGGAAAAATACAACTCGG
AGCCGTATTCCGAAGCTCCCGACTCGGACGCCGCGCGACGCCTGCTCGAGTTCGGCGACG
ACTACCGCGCCTTCCTCGACTCGCAGTCCGACTGCTGCTCCAGCCTCTCCGCACAACCCG
AGCACGACATCAGCCCCAGCGGCACTCGCAGGAGGAGACCTCCCTCCGAGATGTCCAGGG
AAAAAAGTCTACCTCGACACAAACGACCGACCAGGACTTCCCCGGTCGAAACACCGACCA
GAAAACCCAAAAAGTCCATGATGTCTAGCGCTGAGCGCAAGAAAACACTACTCGACAGCC
TAGAAAGATCTAGGAACAACACCAGCCTGGAGAGCAGCGACGGTGTCCGACGCAGGAAGC
CCTCTGACATCAAGAAACACTCGCCCGAATTCGATTTACTTAACGTGCAGGCTCTGAGTC
GACGCCGACACAGTTCCAACATGACCAGCGACGAAGTGAACAGCTCGCTCGAGTACACAG
AGGTCAACAACCGGCCCGACATACTCGACTCCATAAACCGCCGCCGTCGAACGGAGAAGG
ACGGCGAGGCGGAGCTGCAGAAGGTGGCGCTGAGCGAGCTGCGGCGGCGCTCCACCGAGA
GCATCGAGTCCGAGGACGAGTCGTCGTCGCCCAAGAAGCACGGGCGCTGGAGCGAGTCGG
AGTCGGACTCGGAGGAGGTGCGGTCGCTGGTGCGGCGCTCGAGCTCGGCGCTGGAGGCGG
CCGAGGCGCTGCTGGACCGCCACGACGCCTTCGACTACACGGAGGTCGTGACAAGATGTC
GCGAAAATATCAACCTACTGGAAGCAAGTTTGGCCGGTGGGTCTCTCTCCCCGACGTTAC
AGCGAGATGTTAGAGCGGTGTCAGCCCGATGGTCGGCACTCCGCGTGGCCGCCACTCGTC
GTGGTGGAGCCAGGAGACTTCGCAGGGAAATGGTAGCTCTTCGGGAAGCCCTCGACGACA
TCTGCGACCCTGCTGAGAGCGCTCCACAACCACACACTAGAGCCCAGCTGAATCGTCGCA
TCGAAGAATTAAAGGATCGCCTCTTACGTCTTCTAGAATGCAAAGTGTCAATGTTGAAAT
TGACTGTGTCCGTACGTAGAACTCTTGGTGAAATGGAGTCAGACGACAGCGGTCTTGCTA
CTGATTTATCGACTTTGTTGTCTTCGTGGGATGACGCTCATCAAAAAACTTCCAACGAAC
TTCTATCGTTGGAAAAGGCGATTAGCGCCTGGGCTGAATGGGAGGGTGCACTCCGCGAGC
TTCAAGGCGAATTGAGAGGGGACCTCGCCACTTTAGAGGCACTTCGTGACCGAGGCACAA
CTGATGGTGATCAGACAGATGTCACTACGCAGATCAAACAGCTTGCTGCCTCTCTTATAG
AGAAGAAAAAGGGTAGTTCAACATGCGATTCCCTTTCCGATTCCGGTATATCGGATGGCG
ACAGTGAAGGGGTAGGTCGACGCGCGAGGCGTTTGAGTGCTCTCAGAGAATTAGCTCGTC
GGCTACAAGCCACTCTAGCACCTAATTCCCCAGCACACAGGGCTATTGCCAAGCGTATGG
AGCAAACAGAGAACGAAGTGCGAATTTTGCAGGCGTCTTGTAAAGCGCTTGTTGAACAGA
ATATACCTGAACTGAAAATCGATGATGACATAGACAATAGCCTCAGCCCAATAGCGGGCA
GCAAAACAGGTTCAGGCGATCCTGACTACAGTCCCCGAGGGGGTTGGGTGTGGCGTGTAC
TACGGTCGTCCCTTCCCATACAACTATGTCTTGTGGCCTTACTGTTGGCCGCGTGGTTGG
TCGAACGGCCAAGGTGTTGCGACGCCTTAAACTCACTCGCACAATCATTAACTCCTCAGT
TAAGATACGTGAGAGGACCGCCACCAGTGTGAAAACCTCAATTAATAACTTTGAGGTCAA
ATATATGACATAGCATGACGCTCATGTCCAAGTTTTACATTGTTAGACAATACTTTTGTA
TGATACATGTGTATCGCGGACTTTTAAATCCTTATAGAAGGTTTAGGCTACCAGAAGGTA
AAATACATACAAATAGTATATGACAAACGCACGCGTGGCTCTCACGGATAGGAAACGTCA
TTTTGAGAACATTTCAGAACACTGTGGGAGCGAGTGTCGTTACTCTCAATACTAAGTGTG
TCAGAGTGAGTTTAACTAAAACTGAGGTACATAAGTCTTCTGGTAGTTAATATTTTGTGG
TTTAGAAAACTATTTGATTGACATCTACTAACATATCGTTAAAGATAATGACAGATAAGA
CTAAGGTGACTTCGCTAACGATATAAGCGACATAGAATCTGCTCATAGCAAAAGTTCAAA
TAAAGTGTTCCAAAAACCGTCTGTATCAGACGAAATTCAAACTAGGTAATCGTATTTTAA
CATCGATTTTATGATAATACTAACACATAACTTAGGCTAAGAAGCATGCCTAACTTAGTA
CAAGTATTTTTTTAGATTTCTTATTAAGATAAGAGTGCAAGTGTGAGTGATCTTTCTAAA
GAAAAATACTACTGTTTTCAAGTTTATTTCGGATGTATTTCTATAGAACTGTAATATGGG
AGACATTTTTTTTTATTCCCATGACGTCACTGCACAGTATATCTCTTAAAATAGATACTA
TTGCTCCGTAAAAAAGACTGATAAAAGAAAAACTTCAATGTTTTCTTTCCATAAGTTGGT
CAAACTGTATTGCCATTAAAACTAGTACCTTATTTATCTATTAATTTTGATTCATATAGT
TAACTAACATAAAATGCAGTCATAACTAAAAATGGTTAAAACAACATATTTTTGATATAA
AGAGGTGTTTTAGCTACTAATATTTCAAAATAAAATTAACGTGGAAAGGAAGATATGAGA
AGAAAGTCTACATAAAGCTATTTTATCAGTCATTATTAGTTATGACAGCAGAAAAATAAT
TAAGTTACTAGAAACATTGTTTTAGAAAATCCGAATTAAATATTTTAACATCAATTTACT
TTATCGACGTACCATAGGTATAGATAAAAGGAAAATCTGTTATTTTTCCATTCTGAACTA
GTTAAACTAGCTAGTATGTCCGGTACTGAAAAAATATGCCAGAAACATTGTAATTTACGT
TTTAACATAAATATTATATTATTTATTTCTGTATTATATTATCGCTCTATCATGTAGAAA
AATCATGGTTATCTGTCAATAATTGTTGTTTCTTTTCACTTTATTTGTTAAATACAAGCT
TGCCAAAATTATATATTTTTAAAACAAATGACACGCAGCAAGCATATTTTAAACGACGTT
ATTAAAAAAAATATTTCATCAAAAATTTTGCTTTACTTTGATAACTAAGAAGAAGCTTTC
AACAATCAATTATTGCTAAAAAGGGGTCTCTAAGTATAAAAGTTTGGAAACCTCTGATTT
ACAAATAATTCATGATTTTATTATGTGTAGATTGAAGTACCGACATTCTTTAATATTATA
TTATAATATTTATTGTTGGATCTATTTAATTTTCAACTGAAAATTGATGACATTATTTTA
CCTACTTGTTATAATTTTATTTAAATTTATTCGAATCATGTTTTAATTCAATTTAATTGA
CATTTTTTTTTTAATTAATAACTATTAACAGTTAAATACAAAATAGAGGGTGTGAACGGA
AGATATTCTGAGAGTATTTTACTAAAACGCTCAATGTGAAACTGCCTTATAACGTGTGGA
TGTGTGAGTGACTATATTTACAACAGACATTGTAGTCATTTACCTACAATGTTTGTTTCT
AGTGACTAAGTTATCACTCCGCTGCAAAAAAAGAAGCCAGAAATGACAATATAATAAAAA
AAAAAGCAGCGGTGTTGATTTTGTGAGGTTATTTAAGGCAGTAATGCCTCTATAGTGTGT
CATATTTCTTTTAATATCATAATTTACTTAGTTAATGGCTATAATTGAAAGAAAATAGAC
ATGCTTAAGAAGTGCATTTAATTTTTCGTTCTTCGAGATGATGTGAAGGCATTTTTAAAT
AGGTTGCGTTGTGGCATGTTGGCTTTTGGAATGGAATAAAAAATAATAAATTAAAAAAAA
AAAAAAAAAAAAAAA
(7155 bp)

- SilkBase 1999-2023 -