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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9933c0_g1_i8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_speckle-type_POZ_protein_isoform_X1_[Amyelois_transitella]
Ontology
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0016567 P protein ubiquitination
GO:0030162 P regulation of proteolysis
GO:0031648 P protein destabilization
GO:0042067 P establishment of ommatidial planar polarity
GO:0042308 P negative regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:0046331 P lateral inhibition
GO:0048592 P eye morphogenesis
Transcript
Level		FPKM:3.77 TPM:3.70
ORF EntryO_TrvaFAMAMG10914_complete:A_TrvaFAMAMG_TR9933c0_g1_i8
Sequence
(Nucleotide)
CGGCGCGCCGATTACACTATTCTGTGTGACTGTACCGTACACTTTACTCGCGGCAGTCGC
CCGTCATTCTTTGAGCGTACTGCACGTACCTCGCCATTTCGCTCAACCTATGTTGAAGCC
ATGTGGTGAAGTGAAACTGTCAAACGTGATACACTTTCGCACATACGTGTTGATCGATTT
AGTGAATATTTTTAATTACATTTAATGACTCGTGACCATATGAGTGTTTGAAGTGTTAAT
ATTTTGGAAAATTGGATTATACGAACGAATAATGGCCTTAGCCAGGTATAATCAGCAAAC
CGCGCGCTCCTCTTGGTTAAAGCTCGGTTCGGGCAGCGAGTGCGTTGGCGGGTCGGGCGG
CGGCGCGCCCTCTCCGCAGTCGGCGCGCGTCTCTTCGAACGGCGCTGGCGGGATGGCGGT
GAGCCGCGTGCCCAGCCCGTTACACGACGGGAACACGCCCGTCGCTGAAAACTGGTGCTT
CACACAAGTCAAAGTGGTGAAATTCAGTTACATGTGGACAATAAACAATTTTAGTTTTTG
TAGAGAAGAAATGGGTGAAGTGTTAAAATCATCGACTTTCTCAGCTGGTGCTAGTGATAA
ATTAAAATGGTGTCTGCGTGTTAATCCAAAAGGACTCGATGAAGAGAGCAAAGACTATTT
ATCCTTATACTTATTATTAGTCTCGTGTAATAAATCAGAAGTGCGCGCAAAGTTTAAATT
CTCAATATTAAATGCTAAAAGAGAAGAAACGAAAGCAATGGAGTCGCAGCGGGCGTACAG
ATTTGTTCAAGGAAAAGACTGGGGATTCAAAAAGTTTATCAGAAGAGATTTCCTGCTAGA
CGAAGCGAATGGTTTATTACCCGAAGACAAACTGACGATATTCTGTGAAGTGTCAGTTGT
CGCGGACAGCATCAATATTAGTGGACAAAGCAATGTGGTTCAGTTCAAAGTGCCAGAATG
CAGGTTGTCAGACGATTTAGGAGCTCTTTTTGACAACGAAAGGTTCTCGGACGTCACGTT
AGCGGTCGGAGGAAGGGAGTTTCAAGCGCATAAAGCTATATTAGCAGCGCGGAGTCCTGT
GTTCGCAGCGATGTTTGAACACGAAATGGAAGAAAGAAAAAGAAATAGAGTAGACATCAC
AGACGTTGATCACGAAGTCTTAAGAGAAATGTTACGTTTCATATACACGGGAAGAGCGCC
AAACTTAGACAAGATGGCCGATGATTTATTAGCAGCAGCCGATAAGTACGCGTTGGAGCG
GTTAAAAGTAATGTGCGAAGAGGCGTTATGTTTGAGTCTGTCTGTGGAGACGGCGGCCGA
CACACTAATACTTGCCGACTTACACTCGGCGGATCAGCTCAAAGCGCAGACAATAGACTT
CATTAACACGAGTCACGCGACGGACGTGATGGACACGGCGGGCTGGAAGAACATGATCTC
GTCGCACCCGCACCTCATCGCGGAGGCCTTCCGAGCGCTCGCCACGCAGCAGCAGCAGAT
ACCGCCCATCGGCCCGCCCCGGAAGCGCGTCAAGCAGGCCTAGAGCGACCCCCCGCCGGG
CTCCACGCCGGGCCTCCTGCCGCCCCGCTAGCCGCCCCCATACCAAAGACGGGCGTCTCG
ACGCGGCTCGACCGCTGTCATTGATCTCACCGTGCGCCCATCCTACCGCGTCGGACGCGT
ATCGAACGACTACCGGAATGTGTCCTCGTGATTTCTTTAAATTAGTTCTGTGCGATGCGA
GTTGCATTCGAAATTGGTGTTCCCCTTTCCCTTAGTGATCGAAATTAGGTCGCTCCCTGA
CTGGTCGGTTCGATAGCCCTGCAGTGCCTAATGAGTAAGTTCTGAACGAAATTGACTGCT
TGTCTACTCGGTAAACAAAAACAGCAGTACTAGGAAAATTCTACCACTTTCAAACATATA
AATAAGATGTAAATAAATAAAAATAGTCTCAATGCCATGAATAGACTTGAATCTGTTATC
AACCATGTAATATTAAGTAAAGCAATATAATATTATGTTGTCTGTCGTGCGACGGCACAA
ACAGTGCCTATCAGAATCAGTTGCAGAGCAAGCCGAGGCCACACTACTATCATACCGACC
AGGAGGCGACTTTAATCTTACCGCCTGCCTTGTATAATGTAGGCTTTTTCGAATCTATTT
GTGTGTAGCGAAGTGTTCGGATGCAATAGACGTGAATGATTCGTCTCGCGGCTTCGGGCG
GTCGCGATGTGTTTAATGATGCAAGTGTTATGTAGCATCGCACGCATTTATCAATTGTAT
GTAGTAGTTCCCGCTCCGTCGGAAGCCGCGGCGAGTCGTGGCGCGTGACTTAGGGGACTC
GAGTGATTGTATAAGTCTATTGAAATTGTTGGTATTGTATATAGATGAGCTACGATCCCA
CCATTAAAATATTTCTAAGTACTAACTTGTAAGTGGTATCACTGGTGACACCATTATTTT
TTTTACTGTATCTGTAGGGATGCTATTCCAATGACATATTGTGATGTTTCTCTCGTTTAA
TTTCCATAGGGTATAGATACAAGCTTTTGTTTTGTTGTGGCGAATTATCTCTTGAATTAT
TTAAAAGTTAATGTATTGTTGTTGGTTTCGCTTCATCGATTGTAAATTGTGTGTCATGCT
CATATCGCCAACAGGCACTTTACAAATCTACTGTGATTTGCTCACTACATACACTTCTTC
TATTGTGTAAATTTTTTAATTTCGTTTTTATCTTCATCTATTTATTAGTATTAAATCTTT
ATTATCTTAATTTTCAATGACAAGTAAGAAAACTTTTTATTACTTTATTTATGTAAACTG
TCTTCACATTTTATAAATAAAAATGCCGAATGAATTAATAATTATAATTATATTGTGGCC
AATATTTAATACCATTTTATACCCACTTTCCAAAATATACATAGTGGACAACTACCGTTG
TTGTGTAATATAAATATAGTTACATAAAAGCAATTGTCAAAAGTAACTGTGATTTTCGAA
ATTGTCAGTAAGTTGAGCAAATAAATGAAATGATGAAAAAAAA
(3043 bp)

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