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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9933c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_roadkill_isoform_X2_[Amyelois_transitella]
Ontology
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0016567 P protein ubiquitination
GO:0030162 P regulation of proteolysis
GO:0031648 P protein destabilization
GO:0042067 P establishment of ommatidial planar polarity
GO:0042308 P negative regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:0046331 P lateral inhibition
GO:0048592 P eye morphogenesis
Transcript
Level		FPKM:4.61 TPM:4.52
ORF EntryO_TrvaFAMAMG10910_complete:A_TrvaFAMAMG_TR9933c0_g1_i6
Sequence
(Nucleotide)
CGGCGCGCCGATTACACTATTCTGTGTGACTGTACCGTACACTTTACTCGCGGCAGTCGC
CCGTCATTCTTTGAGCGTACTGCACGTACCTCGCCATTTCGCTCAACCTATGTTGAAGCC
ATGTGGTGAAGTGAAACTGTCAAACGTGATACACTTTCGCACATACGTGTTGATCGATTT
AGTGAATATTTTTAATTACATTTAATGACTCGTGACCATATGAGTGTTTGAAGTGTTAAT
ATTTTGGAAAATTGGATTATACGAACGAATAATGGCCTTAGCCAGGCTCGGTTCGGGCAG
CGAGTGCGTTGGCGGGTCGGGCGGCGGCGCGCCCTCTCCGCAGTCGGCGCGCGTCTCTTC
GAACGGCGCTGGCGGGATGGCGGTGAGCCGCGTGCCCAGCCCGTTACACGACGGGAACAC
GCCCGTCGCTGAAAACTGGTGCTTCACACAAGTCAAAGTGGTGAAATTCAGTTACATGTG
GACAATAAACAATTTTAGTTTTTGTAGAGAAGAAATGGGTGAAGTGTTAAAATCATCGAC
TTTCTCAGCTGGTGCTAGTGATAAATTAAAATGGTGTCTGCGTGTTAATCCAAAAGGACT
CGATGAAGAGAGCAAAGACTATTTATCCTTATACTTATTATTAGTCTCGTGTAATAAATC
AGAAGTGCGCGCAAAGTTTAAATTCTCAATATTAAATGCTAAAAGAGAAGAAACGAAAGC
AATGGAGTCGCAGCGGGCGTACAGATTTGTTCAAGGAAAAGACTGGGGATTCAAAAAGTT
TATCAGAAGAGATTTCCTGCTAGACGAAGCGAATGGTTTATTACCCGAAGACAAACTGAC
GATATTCTGTGAAGTGTCAGTTGTCGCGGACAGCATCAATATTAGTGGACAAAGCAATGT
GGTTCAGTTCAAAGTGCCAGAATGCAGGTTGTCAGACGATTTAGGAGCTCTTTTTGACAA
CGAAAGGTTCTCGGACGTCACGTTAGCGGTCGGAGGAAGGGAGTTTCAAGCGCATAAAGC
TATATTAGCAGCGCGGAGTCCTGTGTTCGCAGCGATGTTTGAACACGAAATGGAAGAAAG
AAAAAGAAATAGAGTAGACATCACAGACGTTGATCACGAAGTCTTAAGAGAAATGTTACG
TTTCATATACACGGGAAGAGCGCCAAACTTAGACAAGATGGCCGATGATTTATTAGCAGC
AGCCGATAAGTACGCGTTGGAGCGGTTAAAAGTAATGTGCGAAGAGGCGTTATGTTTGAG
TCTGTCTGTGGAGACGGCGGCCGACACACTAATACTTGCCGACTTACACTCGGCGGATCA
GCTCAAAGCGCAGACAATAGACTTCATTAACACGAGTCACGCGACGGACGTGATGGACAC
GGCGGGCTGGAAGAACATGATCTCGTCGCACCCGCACCTCATCGCGGAGGCCTTCCGAGC
GCTCGCCACGCAGCAGCAGCAGATACCGCCCATCGGCCCGCCCCGGAAGCGCGTCAAGCA
GGCCTAGAGCGACCCCCCGCCGGGCTCCACGCCGGGCCTCCTGCCGCCCCGCTAGCCGCC
CCCATACCAAAGACGGGCGTCTCGACGCGGCTCGACCGCTGTCATTGATCTCACCGTGCG
CCCATCCTACCGCGTCGGACGCGTATCGAACGACTACCGGAATGTGTCCTCGTGATTTCT
TTAAATTAGTTCTGTGCGATGCGAGTTGCATTCGAAATTGGTGTTCCCCTTTCCCTTAGT
GATCGAAATTAGGTCGCTCCCTGACTGGTCGGTTCGATAGCCCTGCAGTGCCTAATGAGT
AAGTTCTGAACGAAATTGACTGCTTGTCTACTCGGTAAACAAAAACAGCAGTACTAGGAA
AATTCTACCACTTTCAAACATATAAATAAGATGTAAATAAATAAAAATAGTCTCAATGCC
ATGAATAGACTTGAATCTGTTATCAACCATGTAATATTAAGTAAAGCAATATAATATTAT
GTTGTCTGTCGTGCGACGGCACAAACAGTGCCTATCAGAATCAGTTGCAGAGCAAGCCGA
GGCCACACTACTATCATACCGACCAGGAGGCGACTTTAATCTTACCGCCTGCCTTGTATA
ATGTAGGCTTTTTCGAATCTATTTGTGTGTAGCGAAGTGTTCGGATGCAATAGACGTGAA
TGATTCGTCTCGCGGCTTCGGGCGGTCGCGATGTGTTTAATGATGCAAGTGTTATGTAGC
ATCGCACGCATTTATCAATTGTATGTAGTAGTTCCCGCTCCGTCGGAAGCCGCGGCGAGT
CGTGGCGCGTGACTTAGGGGACTCGAGTGATTGTATAAGTCTATTGAAATTGTTGGTATT
GTATATAGATGAGCTACGATCCCACCATTAAAATATTTCTAAGTACTAACTTGTAAGTGG
TATCACTGGTGACACCATTATTTTTTTTACTGTATCTGTAGGGATGCTATTCCAATGACA
TATTGTGATGTTTCTCTCGTTTAATTTCCATAGGGTATAGATACAAGCTTTTGTTTTGTT
GTGGCGAATTATCTCTTGAATTATTTAAAAGTTAATGTATTGTTGTTGGTTTCGCTTCAT
CGATTGTAAATTGTGTGTCATGCTCATATCGCCAACAGGCACTTTACAAATCTACTGTGA
TTTGCTCACTACATACACTTCTTCTATTGTGTAAATTTTTTAATTTCGTTTTTATCTTCA
TCTATTTATTAGTATTAAATCTTTATTATCTTAATTTTCAATGACAAGTAAGAAAACTTT
TTATTACTTTATTTATGTAAACTGTCTTCACATTTTATAAATAAAAATGCCGAATGAATT
AATAATTATAATTATATTGTGGCCAATATTTAATACCATTTTATACCCACTTTCCAAAAT
ATACATAGTGGACAACTACCGTTGTTGTGTAATATAAATATAGTTACATAAAAGCAATTG
TCAAAAGTAACTGTGATTTTCGAAATTGTCAGTAAGTTGAGCAAATAAATGAAATGATGA
AAAAAAA
(3007 bp)

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