SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9918c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nephrin-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030198 P extracellular matrix organization
GO:0031175 P neuron projection development
GO:0048167 P regulation of synaptic plasticity
Transcript
Level		FPKM:1.94 TPM:1.90
ORF EntryO_TrvaFAMAMG10847_complete:A_TrvaFAMAMG_TR9918c0_g1_i6
Sequence
(Nucleotide)
CTAAGTTTTATTTCAACAGGTCATTCACCTCACCAGATTGTACAAAGTTACAGATCCACC
CTGTATATCTACTCTGGTGTAAAATATCATTATTTTCACTAGGCATCAGTTTGAAGAAAT
AGTGTAATTTAGGTAGGTACAATTAGCAATATATTCGTTTTTTTGCTTCGTCGTTTCGCA
CCTAACAAGTAATTTTCATACTTCAAAATTATACAAATAAACAAGTTTTTATAAATAATT
CATAAAAAAAATACAATCATATTTTTTATTATTACTACCTAATATTTTATTAGCATAATA
ACAACATAAAGACATGTGAATGCACTTAGCATAATTACCGATCGCTGTAAAAAAAAGTTA
GCACAAGCGCCCAAAAAACATCTTGGAAACTATTTAGTATATTTCACTAATAAAATAAAC
TTACATTACGTCTTTTAATATTACATTTTCTACGCTCTTAACATATTAAAACTAACAAAA
TAAAACACTTTGTTGTTCACTGTGCACTCTGTGTTAAAAAATGACTCTTAAGATATTTAA
TTATCTTTCAAACGGAGAAGATTTTTTTCTATTTATTATAGCAGAGTTTGTATCTCAAAC
TAGTTAATTTAGTAAACACAGCGACATACACATGAAATATTATGTACAGATGCATTAGAC
ACAGCTCTCGGGGCCCGGTATCTCTTCGGCAATGAGATGTTCCCGCCTGCTCAGTGTAGT
GTTACCGGAGATTACCGGCTTTGATACTGAAGTTTTTGGAGATGTCGCATAAGTATGATC
GTCAATGGGCCACTCGTCAGCGGCGGGAAGAGCGCCATTCCTGACACCTGCACTCTTCAC
ACTCTGAGTGTTCCCGTCAGGAGGTGGATTTAAAATATCAGGTTGGGCTTGTTTCGAAGG
TTTCAACGTGTAAGCTACTACGTACTGACCATCACTAGCGTTGATTTGTAGTTCTGAAGA
CTGCTTTATTGGTGGTCTTCCTCTTTTTCTTCTCAAAAAATATACTGTGAATATAAGCGC
ACTGGCACTAATTGCAGACGTCAGTATAATTGCCCAGAACGCAGTTTTAGAAACTCCGGC
GACTAAATTGTTAGCTCCATCTGTTCGCCGCTCAGGTCCTTGATATGTGAGCGCTTGAAG
CGTAATACGTTCCGAAGAGCCTTTATCGTTTCTAGAATGTACGGTTAGTCTCAAAGCGCT
CCCACTCGACCACAACACTCCTGGCGGCACAGAGAACAGTGCCACTCCATCAGTATCATT
AGCAGTGATATTGAATTTAACATTTTCGCTATCAGAATCGATCGCTTCCAATACTATAAG
TTGTGGAAGTCCTCCATCGAAGCCCGTCACACATCGTACCATCAACAAATCAACCATTTC
TTCTCTAGAATCTTCGACCCAATTTGAAGTGTTACTCGATGATACTGTACAGTTCTTTGG
GGGCGATGGCCGAGCGGCTGGAACTATTTGGAAGACACAAGGTTGTGTTTGTTGTCCGAC
CGTGTTGATCCCTCTGCATGTAAGTGCTCCGTAATCTCTTTCACTTGACGGTCTGTACCG
GAGCTCACTTATACTGCTGTTTATTGTTCCAATTCTAGCTGGGGAGACATCAAAACTCTC
TCCGCTGTTATTAAATTGCCATAAGAAAGTTACGTCGGAGGGGTCCGCGTGGACCGCACA
TCGAACTTGCAAAGCCTCATCTATGGCTGCTCCTACCACTTGAGGTGACGGCTCGGCGCA
CACTGGAGCATATTGTACTCTTAATTTGACAGCTTGACTAGAAGTTTCTCCCCTAGCGTT
AGCAGCTTTACAAGAATAAGCCCCGGCTTCACCTCGCGTCACTTTCTGTAGGACGAGCGA
CCTCGTACTGACAATGATACCCGAAGACATGTTCTGCATCACCAGCCTGTCATTATGATA
CCATGATATTCGATGTTCCCGCGGATTCGCTCGCACATTGCACTCGAAGTAAACATCGTC
ACCTTCCTTTATTTCATGAGGATTCAGAGTACTCCCCAATGTCAGTGTTACCAGTGGACT
ATATACAACATTTAGTAGTAAATGGTCATCTATCGTTTTCGTCGGTAAACTGGGGTTTGC
AGCAACACATTTGATGGTGGCGCCGTGGTCTGAAGGAGCGGGTGTAATCACCAATGTACT
GAGTGACCAAGTCTCATTGGAGTGGTCTGATATCATGTTTTTAGAAAAACTTCTATTGTC
TTTGAACCAAGAAATCTGCGCTGGTGGTCTGCTTCCTTCAGAGACACATCTTATTGTTGC
TGGTGATCCCGCCAGGAGTTGCTGAGGTCGATTTAGTAATGAAACGGAAAGCGGAGACAA
ATTCAGCTCAAGTCTGACAACCTTCTCCTGAGGTGGAACTAAATTGGTATTAGAAGCTCG
ACATTTGTAGGTAGTGTTCAGATCTTCGCGCTTCAGATTATGTTGTTCTAGTCTGTTCAC
TACCACGTGTGTGTCGGTCTTCATACCGATGTACTGAGTAGCTGGATTTCCGTTTATCCA
CCACGATACCAGGGGCTCTGGACGACCTCCCCTCACTTCACAAATGAGTACCAAAGATGT
ACTTTCTTCCAAAGGTCCCACAACTCCAGACACATCAGCCCCAGATTTGTCGTACAACAG
CATTTGATGGGGTGGCACTATCACAGTCAAACGAATTTGAAAGTTCCTTGTCGGTGAATT
CTTGAAGTCGACTCTACAGCGGTATACACCTTCATCGTCGAGTTGTACGGAGCTCAAGGT
AAGGGCAGCCGGTCGTGCGACTGTTGCGAAGTAGGCTCTTGGTCCAAAGGCACCAGGATC
TGACCATTGGAGCGCTTTATTGAACGACCGACCTCGCACGTCGAAACTGTAGATAGGTTT
TCCTCCACTTTTCCTGAACCAGAGCACCATGTAGACACGGTCTTCATTAGCATCAGGTGT
GACGTCACAGGGCAAGGACGCGGTCCGTCCCAATACTGCATCTACATCGACTGTTGATAC
TAAGTCTTCAGCATCTTCACTCCACTCGCCGCTACCGGCTACCAGCACCGACACCATTGC
CAGGAACATACGCCTCAAAGTCGATTTCATTTTGCACGTCAAAGCTCATACATTTAAATT
CAACTAACACTATAAACTATTTGAAAATTTGGCAACATCTTTAAAGATTCTAGACAATTC
CTAGTTTATTATTTAGCTTAAGTGTATTTATTTACTAAGTTAAATTAATTATGGATTTTT
TTGTAATGATTCGACTTTCGTGAACATCAAAGTGTCAGTAAGGTCACGAAAAATGTCCGT
TTTTGTCCGGGTCATTTCTCTAATCGTTGCGACATCATACGACTTTTTGTCCGATGTGTG
GTCGATGTGACGTCACGCACGGAAGCCCGGAACACGGTTAAATATACCAATGAATTATTC
AGCACTCTTTTAGCGGCGACGCTAGGCGGGACTCGGCGGACACCGTTCTGTCGCGATTCA
CTTCACATAAGCACATTGAAAGTTTGTTTGTAAAGACGCGACAGTTCATGGTCTGGGTCA
CGCACGCCACGTGCACCTAGTTCAGC
(3566 bp)

- SilkBase 1999-2023 -