SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9918c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nephrin-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0036057 C slit diaphragm
Transcript
Level		FPKM:0.19 TPM:0.19
ORF EntryO_TrvaFAMAMG10846_complete:A_TrvaFAMAMG_TR9918c0_g1_i5
Sequence
(Nucleotide)
CTAAGTTTTATTTCAACAGGTCATTCACCTCACCAGATTGTACAAAGTTACAGATCCACC
CTGTATATCTACTCTGGTGTAAAATATCATTATTTTCACTAGGCATCAGTTTGAAGAAAT
AGTGTAATTTAGGTAGGTACAATTAGCAATATATTCGTTTTTTTGCTTCGTCGTTTCGCA
CCTAACAAGTAATTTTCATACTTCAAAATTATACAAATAAACAAGTTTTTATAAATAATT
CATAAAAAAAATACAATCATATTTTTTATTATTACTACCTAATATTTTATTAGCATAATA
ACAACATAAAGACATGTGAATGCACTTAGCATAATTACCGATCGCTGTAAAAAAAAGTTA
GCACAAGCGCCCAAAAAACATCTTGGAAACTATTTAGTATATTTCACTAATAAAATAAAC
TTACATTACGTCTTTTAATATTACATTTTCTACGCTCTTAACATATTAAAACTAACAAAA
TAAAACACTTTGTTGTTCACTGTGCACTCTGTGTTAAAAAATGACTCTTAAGATATTTAA
TTATCTTTCAAACGGAGAAGATTTTTTTCTATTTATTATAGCAGAGTTTGTATCTCAAAC
TAGTTAATTTAGTAAACACAGCGACATACACATGAAATATTATGTACAGATGCATTAGAC
ACAGCTCTCGGGGCCCGGTATCTCTTCGGCAATGAGATGTTCCCGCCTGCTCAGTGTAGT
GTTACCGGAGATTACCGGCTTTGATACTGAAGTTTTTGGAGATGTCGCATAAGTATGATC
GTCAATGGGCCACTCGTCAGCGGCGGGAAGAGCGCCATTCCTGACACCTGCACTCTTCAC
ACTCTGAGTGTTCCCGTCAGGAGGTGGATTTAAAATATCAGGTTGGGCTTGTTTCGAAGG
TTTCAACGTGTAAGCTACTACGTACTGACCATCACTAGCGTTGATTTGTAGTTCTGAAGA
CTGCTTTATTGGTGGTCTTCCTCTTTTTCTTCTCAAAAAATATACTGTGAATATAAGCGC
ACTGGCACTAATTGCAGACGTCAGTATAATTGCCCAGAACGCAGTTTTAGAAACTCCGGC
GACTAAATTGTTAGCTCCATCTGTTCGCCGCTCAGGTCCTTGATATGTGAGCGCTTGAAG
CGTAATACGTTCCGAAGAGCCTTTATCGTTTCTAGAATGTACGGTTAGTCTCAAAGCGCT
CCCACTCGACCACAACACTCCTGGCGGCACAGAGAACAGTGCCACTCCATCAGTATCATT
AGCAGTGATATTGAATTTAACATTTTCGCTATCAGAATCGATCGCTTCCAATACTATAAG
TTGTGGAAGTCCTCCATCGAAGCCCGTCACACATCGTACCATCAACAAATCAACCATTTC
TTCTCTAGAATCTTCGACCCAATTTGAAGTGTTACTCGATGATACTGTACAGTTCTTTGG
GGGCGATGGCCGAGCGGCTGGAACTATTTGGAAGACACAAGGTTGTGTTTGTTGTCCGAC
CGTGTTGATCCCTCTGCATGTAAGTGCTCCGTAATCTCTTTCACTTGACGGTCTGTACCG
GAGCTCACTTATACTGCTGTTTATTGTTCCAATTCTAGCTGGGGAGACATCAAAACTCTC
TCCGCTGTTATTAAATTGCCATAAGAAAGTTACGTCGGAGGGGTCCGCGTGGACCGCACA
TCGAACTTGCAAAGCCTCATCTATGGCTGCTCCTACCACTTGAGGTGACGGCTCGGCGCA
CACTGGAGCATATTGTACTCTTAATTTGACAGCTTGACTAGAAGTTTCTCCCCTAGCGTT
AGCAGCTTTACAAGAATAAGCCCCGGCTTCACCTCGCGTCACTTTCTGTAGGACGAGCGA
CCTCGTACTGACAATGATACCCGAAGACATGTTCTGCATCACCAGCCTGTCATTATGATA
CCATGATATTCGATGTTCCCGCGGATTCGCTCGCACATTGCACTCGAAGTAAACATCGTC
ACCTTCCTTTATTTCATGAGGATTCAGAGTACTCCCCAATGTCAGTGTTACCAGTGGACT
ATATACAACATTTAGTAGTAAATGGTCATCTATCGTTTTCGTCGGTAAACTGGGGTTTGC
AGCAACACATTTGATGGTGGCGCCGTGGTCTGAAGGAGCGGGTGTAATCACCAATGTACT
GAGTGACCAAGTCTCATTGGAGTGGTCTGATATCATGTTTTTAGAAAAACTTCTATTGTC
TTTGAACCAAGAAATCTGCGCTGGTGGTCTGCTTCCTTCAGAGACACATCTTATTGTTGC
TGGTGATCCCGCCAGGAGTTGCTGAGGTCGATTTAGTAATGAAACGGAAAGCGGAGACAC
TGAGGACAAAACAATTATAATGTATAAATTAGATGTTACGCTAAATCTTAAATAAAAACC
ATTTTATTTTTGACACAAAATTATACTACATT
(2432 bp)

- SilkBase 1999-2023 -