SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9906c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_histone-lysine_N-methyltransferase_SETD2_isoform_X3_[Bombyx_mori]
Ontology
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0010452 P histone H3-K36 methylation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0035220 P wing disc development
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:2.33 TPM:2.28
ORF EntryO_TrvaFAMAMG10742_3prime_partial:A_TrvaFAMAMG_TR9906c0_g1_i1
Sequence
(Nucleotide)
GTTGAAATGCTGTAAATGTTGAAATACTGAAACAGTTTTCTTAAAAACTTACCAATTTAG
TAATTTTAATTTGTTTTTAGGTAAATAACAGACGTCTTTGTCCATTCCGCGACAAATGTA
AGGAATACTTTGTTATTCCTAAAAGTAATGGTTGTTTGTTGCTGCCTCCGATTTGAGGAG
CAATGGCGAAGCGAAAAAAGGCGGCGGCGAGGAGTGCCGCGACGAGGCGTACTACCCGAC
GCGGGAAACAAGCTACTGATGCGGCGACCATTGATGGAGAAGTCTCGGCGCCCCTCGACA
CCCCAGCCGAAACCAACGAGCCTCCATCTCCCAAACCCAGCACCTCAGAGCTCCAGCCAA
CATCCAATGATGACCACAATGCTTCAGAATCACAATCAACACAGGACACATCCTCCAAAC
CAAACCCTGTCCAAGTCATATCACTGCACAAAAAGTTTGGCAAATACAGGTGTTTGTTCA
ATAGTGATGATGCATTCCTTAGAAAATATGAAATTGGGAGTGACAGTGAAAACAGCAGTA
TGGACGTGAGAGTAGTTGACCCATGTGTCAGCTCAGAGTCAGATTCCAATGCTGCAGTAG
ACACACAATCTGATACAAACAGTATTGTATGCACTAGTCCTATGAACAGTGCTACAAATA
TATTACCTAGCAATTCAAGGGATATGTCACCACTAACTGTAGCAATCTCTTCAGATAATA
ATGAAAACAATAGAGATTTAGGATCTCCTTCAATATTGGATGACAGTTCACAAGCTACTA
TTGATGATTTTGAGGGACAAACCAATGAGACTTACATAGAGAATCCTCTTCCTATAACAG
AAGCTCCTATTACAGAAACAACTGCATCTAAAAGTGAGAATGGAACTGAACAAGAGCAGT
ATCAAACTATTGTCTTGGATGATGAACAAGTTGAGTACACCTGTGATGATGAAGAAATTA
TAACAGTTGTCCAAATAGTTGAAGATGATAATCCAGAATTATATTATGATATAAAAATAG
ATAGCCCAAAAGCTGACAATGAGAATGGTGAAAAGTCACAGGAGAATGACTTTCAGAGGC
ACTTTCAAAATTTAAAACTGAATTGTGTGAATGAATCAAATTCTTCAATGGATTGCTCCG
AAATTATTGACATTACAACCCCATGCAGTACTCCTGATCCTCAAACACCTAAAGAGACTG
CAAATGAATTATTGACTAGACCAGACCCTAGTTTAACACCTAGTTCTACTTTATCTGATG
ACAGCAATTGTTCACGAGCAGATCAAATTCAAAATTCAAATGATTCAGCTGAGTCTTCAC
CCACAGGAGTGCGGAGGTCAAGCCGCATTAAGACTATTAGTAATCTCAAACAGAAGACCA
AAGGATACGGTCTAGTAAAGACTCCATTGAAAAAAGCTTTAATAACTCAAACTAAATTAA
AATTGGAGGAGATTGGGTCAGATAGTCAGGAGAAATTCAGTGATCAAGGAAACACTGCAC
CAAATTCACCCTCCTTTCCTGTACCATCTGAGATGCCTGTAAAAGTAAAGTCAAGATGGA
GGAGATCTAGTGAGCTAGAAATGGGTGCAAATTCACCAGCAAGTTCTCCTTTAGCTAGTC
CAGGATTACCTCAGAAATTGCCTGCTGTAAATGAAGGAAATGAAAATGAAGAACAGGAAT
CTATACCTCTAAGTAAAGAGGCATATGACAAGATAATTGAAGATAGAATGAATCAGTATC
AACATTTGGATGAGAATGAATATTTGTGTGAGCGTATGGTCAGTAAGGAAACCAAGAAAA
TGATCTGTGACTGTTTTATGACCAAAGAAGAATTGGAACGTGGTGAATTGGCTTGTGGTG
AAGATTGTCTCAATAGACTGCTTATGATAGAATGTAACTCAAGATGTCCTGTAGGAGATC
GATGTACAAACAGAAGATTTCAGAAAAAAGAAAATGGTGCTTTGAGAGTATTTTATGCAG
ATAAAAAAGGTTGCGGTGTGGAAGCTAGTGCGGACATACCAACGGGCGAATTCCTAATGG
AGTACGTAGGAGAAGTATTAGATTACGAGTTATTCTACAAAAGGGCTCAAGCATACTCAG
ATGACAACAACCTACATCATTACTTCATGTCTCTGAAGGGTGACACAGTTATCGATGCCA
CCATGAAGGGTAATATATCGAGGTTTATTAACCACTCGTGCGATCCCAATGCTGAGACTC
AGAAGTGGACTGTGAATGGAGAATTAAGGATTGGTTTCTTCAGTAAAAGAGATATCGGTG
TTGGAGAAGAGATCACTTTTGATTATCAGTTCCAGAGGTTTGGAAAAGTTGCTCAACGCT
GTTACTGCGGGACTGACAATTGTCGTGGATGGATCGGTGGAGAACCTGATTCAGACGACG
AATATGATGATGAGGAGGAAGACGTATCAACATCCAAGTCTGTGACGTCAGAAGGATCTC
AGTCGGAGTCTACGGGCGTAGAACAACCGGTACCGAAGACGCGCCGACCGAAACGTGACC
GGAAATACAAACCGAAACCGCCCGAAATCGAACCGGATGCTGATATCGAAGAAGATTTAG
AAGCTCTAAACCGCACTGGTGTTAAGAATCAGTCGCATACCCTGCGGTTATCTCGTACGG
TTGTCCGCGCCAAGGGGCGGAAGGCACAGATAGCTTTGCTGAGATTGTTGCGGGATGCTG
ACCTGCCGTGCAGACGACTCTTCTTAGATTATAGAGGTCTGAGGTTGCTGGCTCCGTGGT
GCACTGATGCTCCTTTGGACTTTAAATTGGAAATGCTGCAGACAGTAGATCGATTGCCGA
TCCCCAACAAAACTCTTGTACAAGAGAGTCGTTTCCTAACTATTGTGGAACGATGGTTGA
GCTCCACCGAAACTCCAGCAGAAAACGTTTTCATTGATGAAGCAACTGGATTGCCAATAG
ACATACCAAACAGGCCAAACCAAGAATCTCTAAGTCCGGAAAAGATAAAGGACAATATCA
ATATATCAGAGAAAGTTAAGGATCTGTCAAATCAGTTACTCGAACGATGGTCCAGCTTAA
AGGAGGTGTTTAAAATACCGAAAAAAGAAAGAATACAACAAATGAAAGAGCATGAACGTC
AGGCTAACGTTGAAAGACGCGCCGCAGACTCAAGCGGAACCAGAGACAGGGATAGAGATA
GAGAACGCGATAGAGAGAGGGAGAGGGAAAGAGAAAAGGAAAGGGAGAGGGAGCGAGACA
GGGAAAGAGAACGAGAACGGGACAGAGAGAGGGAGAAGGAGAAGGAGAGAGAAAGAGACA
GGTATAGGGAGAGAGAAAGAGACCGCGAGAGGGACAGAGATAGAGACGACAGAGATAGGA
GAAAAAGAAGAGGGAGTCCTGAGGGCAGGAGGAGTATTCGTTTAAGTGAGAGAGTATTAG
CGGCCGTACCACCGATGTCTAAAGAGGAGCGACGACGCGCCTTCGCCGAGGCAGCCGCCG
CCGCCGAGGAGACCAGGCGGCAGAGGGACCAACAACGACCAACATGGCCCGGGTATTGGC
CACACGAACAGTTCCAACAGATGTTTCCCGGCGGGATGATGCCCAGCGGGAACATTATGG
GCGGCATGATGCAGAACATGCCCAATATGCCAAACATGCCGAACATGCCCGGCATGCCTG
CCAACATGATGGGTCTACCGGAAGTGCCGTCGGAGTGGATAGCGCCAGAGTTCCCGCCGC
CCGGCTTCTGTCCGCCATTCCCGCCTACGCAGCCTTTCTGTATGCCGCAAACAAATATGA
TGGGTATGAGCGGTTTCGGTGGTTTCATGTACGGACAGCAGATGACGCCGTTCCCACAGC
CACAAGAACCTCCACTACCGAAATCGGCAACACCATCAGCCACGCCCCCCGCGCTACCAG
CCTCCGCCCCGCCCCCCGC
(3919 bp)

- SilkBase 1999-2023 -