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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9877c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_virilizer_isoform_X5_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:7.51 TPM:7.36
ORF EntryO_TrvaFAMAMG10553_complete:A_TrvaFAMAMG_TR9877c0_g3_i1
Sequence
(Nucleotide)
TTCAAATTCAATGAAATTCTTGTTTACCGCAGCAAAGCGATAATTATTAATTTTCTAAAT
TAAATAGTAAATTAATACACGTAAATAAGTGAAATGTTATAAATCTACATAATGGCGAAC
TCCGAAAAGCCCGATTTGTTATTCTTCGATACATTTTCTCACGACACAAGCGAGGAATTG
AATTTGGATCTAGTGCAGTTCCCGAAGTCGGTTTACGTGAGGGAAATTCGAGTGATTCCG
TTGGGAGCGCGTGTAGAAGGAGATTTTCCCGGTCGAGTTCGCCTTGGTGCTACAAATCCT
ACTAAATTCCACATTGATTTCTTCGTCAATGACCTGAGTAAGCCGGGAGCGTCCACCTTC
GAGGCTCTGGGTAGCCTGGACTACTGTCAGAATGGACAGATCCACATGGAGTGTGGTGAT
GGTGACCAGCCGAGGATACCTACTGATGGACTGGTTTTAAGAGGTTGCTACACCACCATC
ACGCTGGCAGTGTACGGGACTCTCACCCAGATACTACCAGAAGCACCCATCGGTGTCAAT
CCTCCACCCAGCATCCAGAGACCAGTAGTCGCTAGAGACGTTCCACCAACAAACGCTCCA
CCACCCGACTGGGATCCAGAAACTTCCAACCCAATACCCTCGTACACTGGCAATGTAGCC
ACCGCGAACCCAGAAGCATACGCCCCTAATTCATACCCAGAGAACTACGACAATCCCATT
TACAGGAACGAATATTACGAGAATGAACCACCTAAAGACCCTAGGACTTACCACGTGGAA
GGTGATTGGGATAAGAACAGAGAAGTCGGTGACGGTGATAGATTGAGGCACAGCTCCAGA
TCAATGGAACGTGACAGGCAAGGTCACGGCAGACGAAGGTCACTGGACCGACGCAGCCGA
GACTCATCCAGACATAGAGACGACAGGATAGAACGGAATCGATCACGAACCAGAAGCCGT
GAACGAGAGTTCATCGTTCAGGGAGAATACCGACCTCGCAGTCGCTCCAGATCACGCAGC
GGAGACAGAATGAGAGCCTCCACCGACAGAGATTGGGACCGCGGCTCCTACAAGAAGGAC
GACTACAGGCGACACAGAGATGCGTCCTATGAACGCTCGCACGGAGAACCTTACGACAAA
GAGCCCGGTTCTTACGATCGCAGGTCGCCGTATGACAAACGCGCGCCCTCCTACGAACGG
AAGCCCGGGTATGACAAGCGACTGTCGCCGTACAAGCGAGGTGGCTCGTACGAACGACGT
GCACCATCCTATGAGAAACAAGGACCTTATGACAGAAAACGAATGTCGCCCTACAGCCGC
GTCAGGAGCTCCAGCTACGGGAGCAGGTCTCCGAGCCGCGATGATCCCAGGAAACGGCCC
AGGACTCCGCCCGGGGAGAGTCGCCGTCCACTCTCTCCACGAGAAGGAGATGCGAGCCCT
ATCCATTCCGTCAGGTCTGAAGATGAGTACGACAGAAGCGGGAAGCAAATACCAAGAGTT
GATTTCTATCATCAGAACTATCGACCGAAACCTCCTATCAGAAGTCCCTCACAAGAACTC
GCAGCACCATTCGTTGAAACTCACTCAAGTTTGGTAACAGTCCCAATAGTGGACAACCCT
CCAAAATCTGATACGCCAAGCGGTAATCCCGAGGAGGACAAGTCGATCGACGCAGAACAA
TTTGAACCAATCCTTTCTGATGAAGATATCTGCGATGATCTCGAGAGCTCTTCATACATG
GAGGTCGATTATGACGTCAACGAGTATGTCGGCGTTGATGACATTATAAAATATTTCAAT
CCATTCAAAGCAGAGTGGACCAAATATGAATACGTGAATAAAATACAGTATTTGGGTCCA
AAACGCGAAGGTGTGACAGACGTGATGTCAGCTAGTTTTGACGACTTGTGTGACGTCAGT
CCCGACCTTTTCAAAGTTTTAGAAATATCAAAGAAAATGGACAGAAAATATTTTACAGAT
TCGTTCAAAGACATTGATAATACTATGAGAGAAGAGTGGGTCCATCAATGTGAACAAATT
TACATATCCATGACGAATCTTTGCAAGAACACCGATATTGTGGTCAGAATATTTCAAAAT
CCAACACCTACAGACGAGTTTGGTGAGATCAATAACACGTTGATAGCATTCTGTAAAATC
GGTTTAAATTATGTTTACGCTTTGTCTCAGCAGCAGCCGACTTATAAGATACGACACATG
AAGTGTGGCATTCGTCTTGCCGAAGCCTTGATGGCTCACAAACACAACGAAATTATCATG
AAACTACTACTTGAGTCTGACATAGATTTACCCATGCTACTACTGCAATTATATGCAGAA
GAATACATGGCCTTAAGTATCAGACTCATGGTCCTAAAAGCCTTAGATGCGTGTTTATCA
TCAAAACTCTCCATAGAACACTTTAAGAAAGAAAAGTTGTTCCCTAAATTCGATAAGAAC
GAAACTGAAAGGAAACCCAAGAACGGATATCAAGCTCTCATATCGATGATGCAGGCCAAT
CCACTCACAAGATTGAAGTTCTCAATCAGTGCTCTCATTAAAAAGCTAAATATGTACGAG
GCGCTGAGCAAACTACACGATTTGGTGATGGACTTCAGCACAAAGTCAGCTGAAGCAGAA
TTTAAAGAGGCAGACATGGAATTCATTATAAATTGTATGGAAGAAGTTCTGTACATGTAC
AGGTCTCAATGCTTCCATCTATCTCAGCCCAAACGATTTCTTCCCGTCTCAGCACAGTTC
GAAATTAATAAAGAGGGTAGTCACGAAACTTTACTGGAATTTTTCAATATTCACCACGTC
CTTGAAGTCTGCCTTTATCTGCTGACTTGCCCTAAAACATGCAACAACTTAGTGATCGCG
AGTCCCATCCACGATTTAATTTACGAACTGATCAACTCAGTGAGGGGCCTAAATTTCTTA
TACAAGAACATTGAGATGAGTGAGGTTTTATTTAAAACCTTAGCTCAGCCTTACAGCCAG
CAAAATGTCGAAGAGTTCTTATACCCTCACGATTTGAGTAATTATTCCGACTTGCAAGTT
TTGGCGTTGGAAATGGCTTACAAACTAAAGGCCTTATATTATCTACAGTCTATTTGCGAC
TTGCAAGCTGGAAAAGTGGACGAAAATGAATTGATCGATCGGTTACAATCTTTATACTGC
CTCAGTTTCGGATGTATTGGTAGGACTGCGGTACCTGACGTCATTGTGATGGTCGACAAC
GCTGACTGCTTGATGGAAGTCTTTGAAAATGATTCCAGGAAAATTAAAGGGGATTTTCCT
GCGAAACAAAAATCGCCCGCGAAGGGTTACGCTATTGAACTGATCGTGTCTGCAGTCAGA
TTCTCAGCTAATGTAACGTTTTTGAGGAAATACGGACAAAGACTTATAAACGTGTCGAAA
GATCACGATAGGTTCGAGCCCAGCGTCTCCAGTGTACTTCAAGAGGTCATACCGTATTTG
AAACCCATCGAAAACATGAGCCTCTTGAATGGAGACGATTTAGCTGAATGTGTCGAGATC
TTAAAAACGAATTCTGAGCATGCACCGGACTTGCCCGGAGAAATTACAACTTGTCTACGC
ATCTTGAGGCATTTCAGCATATCTGACTACGAATCTAACGTCGCTATAGCCAACGAATCA
GCTGTTGAGGAATACGTTGAACTTAAATATAAATACAACGTATTACAGCTGTTCTCTTTA
GATGGAGTAGCGCACTTGGCAGGAATCCTTGATAAGTTGGCCACACATTTCGACCAACCT
AGCATGCACACGTCATTCTTTGCTTCAATAAAGGGGTTACAATTGGCTCAAATATTGGTT
CCATGTTTGAGATTGTTGGACGAGATGTTGGCAAGAGTAGTGCGTTGTCGGGGACCACGA
TTTAGAGATCTAACTGCTGCTCCAGTGTTATTAAAAACTTATGGTATTGCCAAGTCGTTT
CCTGTTGGTTGTGTTGGATACAGAACAGCAGCGAAAGCCGCTGAGGCTGCAGTGAAAGCT
TTACTTGCCTACGCTCAGCCTATCGCTGACGACGCTAATGATGGTGACTCCATACGTCGA
GGACCATGGACGTCACTATGTTCTGAAGTCATCCAATACACTATGACAGCTCCTTACACT
TTCGTTCCCGGGTTGTTAGTGTTCTCGGAACTGCTGCCTTTACCTTTACCAATGCAAGCA
AAGACTCCACCAACTCCAAGGGAATTAGAAGACGCTTGTAACGAACGCCGGTTGTGGTCA
GCTCATTTGCACGCGCTGACCAATGATCTGACGGACATGATCCAGATTATATGCATGTCC
ACATATCGTCCGGTCGTACACATGCTGAGACGTGTGTGTGTTCAAATAGCTGATCTAGCT
CCCAACACAGCAGCTACCGTCGCTAATGCTGCAGTCGGAGCTGTCACGAAGGAAATAAAG
CCTGAGGAACCTGCTACAGCGAGTTCAGCTAGGGTACTAGGTTTCTTAACATGTCTGGTG
TCGCATGCGCCCGTCAAATGCGCTGTCCTTCACGCTTTGAACACTGGAGGACCTAAATCA
GCAGAGATACAGGCGGCTTTGTGCGGAGTTCTCACTCTATCGAACGGCTCCACTGATCAT
TCAACCGCGCAAGAGTTTGCAGCTCACATCTTAGCGGCGTTCTGTGATATAGAAATCACA
CTGACGCCAGTATCGTCCAACCCAGATAATCTACTCGCGAATTCTCTACCAAATAAAGAA
GCGCTGGCACAATTTCTTGACTCCACAGCCGATTGCTTAGAATCCACTACCAAAACATGC
TCCGTAGCCCAATCAATTCTACGAGCATATTTCGTTTTAACCGACCACGAATACGGGTTC
CAGCAGTTCAGGAAATTTGTTACAAAAAAGCGGGAGGCTTTAGGAACGTTTTTCAAATGG
GCCGTGGAAGGTCCTGGGGAAGAAAAGGCAGAGTGCTTGAGTTTGTACTTGGATCTGATC
AGGATCCTGAAGGGTGAGGAGGGTGAAGGTGGTCCCGTAGTTCGGAAGTCCGTGTTGACG
CCGGTAGAGATGGCCGACATGCTGGGCTACACTGCGGGGGCTGAAGATCATCCCATTATG
AGTTTGGAGAATGTTTTGAAGGAACGCAACGCAGAAGAAGACGCCTCAGCAGTCAGGTTC
CTAACAGGCTACCTCCAGAAGCTGCCGGAGCCCGGGTCGCCCGCGCCCGAGGTCCCCGAG
GCCCCGCAGCCAGGCCCCGACACGCTGGTGGTACAGTTTTCCACCAGAACCGTGTACAGT
ATAGGAGAGCCTAATGACGAGAGGCTCACTACTAGCTACTGGCTGAATATACCTTCCATC
AGCGGGGAGGATTACGTTAATGATCATGAATTGGTGCCGTGTGACATCATGGAGCTGGCC
AACAGCTACCTGTCGCTGGGGGGCGAGGGCGTGGCGGGCGCCGTGCGACGGCTGGCCGGC
TGTCTCGACGCCGCCGCCGAGCCCAGCGCGGACCACAAGAGACCCGCCGTGGATCGCGGA
GTCCGCGTGGGGCGGGGTCGCGGGGCGGAGGGCGCGGACTCGTTCCGCTGCCGCCCGCCC
AACACGTCGCGCCCGCCCAGTCTGCACGTCGACGACTTCACCGCCCTGCACCACACGTAC
AACAACAGTCGCGGTGCTCGTCGCGGGTCGGACCGGGGTCGCTTCGCATCGGCCGCGCCC
GTACACTCGCACTACAGGCACATAAGGGGTCGCGGCGCCTGGGAAATGGGAGCTTCACAT
TTTGGACATTTCCCGCCCTCCTCGCAGTACATGATGGGTGGGGGTGTGGGCGGATGGAGT
GGGGGAAGGATGCAGCGTGGACCGAGACACAGGAACTTCATGCGTTGAACTATACACTTT
ATAATATATCAGTTTATGAATTTTAAAAAAAAAA
(5914 bp)

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