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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9873c3_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_2_[Papilio_machaon]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0043234 C protein-containing complex
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
Transcript
Level		FPKM:28.72 TPM:28.13
ORF EntryO_TrvaFAMAMG10538_complete:A_TrvaFAMAMG_TR9873c3_g1_i2
Sequence
(Nucleotide)
TCGTTTCGCAGTTTGATTGTTTTTGTGAGACTGTGCATTTGCGGGAGGGGGCTTGTTTTT
AGAAACAAGGTCGTTCTTTGTGTCAAAAAATCTACTTCTTTGAACGAACTAACAGTATAC
AAAATTCACTTGTAAAAATTAAAGAGTTAAAGACTGATTTGTGAAAATAATATAAACTGT
GTGTATGTCGTGTTTAGTTGTTCGTATTTAGAACAAACTGCCCGTTTCAATCGCTCCAAT
GAGTCTGGGAGGAGTTGCAAACACAGAGGGATCAAATGCAGGAGGAATATTCGTACAATT
TAATCAAGATTGCACGTCATTGGTGGCGGGCAGCAGTAGCGGATACCACTTGTTCTCGCT
GACCCCCGACGATGGCATCGAGGAGATCTACGCGAGCCGCAGCGGCCAGGAGACCTGCCT
CGTCGACCGTCTCTTCAGCAGCTCGCTGGTCGCTGTTGTCACAGTATCCGCTCCCAGGAA
GCTGATAGTGTGCCACTACAAGAAGGGAACTGAAATCTGTAACTACATCTACAGTAACAC
GATCCTCGCTGTCAAGCTCAACCGATCCAGGCTGATCGTGTGCCTGGAGGAGTCGCTGCA
CATCCACAACATCCGCGACATGAAGATCCTGCACACGATCCGCGACACGCCCCCCAACCC
GCGCGGGCTGTGCGCGCTGTCCCCGTGCGTGGAGCACTGCTACGTGGCGTACCCCGGCTC
CAGCGCGGTGGGCGAGGTGCAGATCTTCGACGCCGTGCACCTCAACGCCAAGTGCGCCAT
CTCCGCGCACGAGAGCCCCGTGGCGGCGCTGGCGTGGTCGGCGTGCGGCCGGCGCCTCGC
CACGGCCTCGGAGCGCGGCACCGTCATCCGCGTGTTCGCCGTGCCCGAGCGCACGCGCCT
CTTCGAGTTCCGGCGCGGCGTCAAGCGCTGCGTCACCATCGCCTGCCTCGCCTTCAGCTC
CTGCGGGCTGTACCTGGCCGCCACCTCCAACACCGAGACCGTGCACGTGTTCCGGCTGCA
GGACGAGGCGCCCGGCGAGCCCGCCCCGGGTGCGGCTACAGGCGAGCCCGCCGCGCAGCC
GCCCGCCGAGGCCGACTCGTGGCTGGGCTGGCTGTCGGCGGCCGTGTCGGCGGGCGCGGG
CTACCTGCCGGCGCACGTGACCGACGTGCTGTCCCAGGGCCGCGCCTTCGCCGCCGCGCG
CCTGCCCACCACCGGCCACCGCGCCGTGGCAGCAGTGACGAGGGTGTCCCGGAGCCCGCG
GCTGCTGGTGGCGACGTCGGCGGGCGTGCTGTACGTGTACGGGCTGGACGCGGCGGAGGG
CGGCGAGTGTCCGCTGCTGCGCCACCACCGGTTCCTGGGCGCGGGAGACGCCGCCGACGC
CGACCCGCCGCCAGTGTCCGGCGGCAACAGCTACGCCGGCGCGCTGCGAGGCCGGGACCC
CGCCGCCATGACAGATTCGGAGCGCGCTCACGAGCTGGGCGCGGCCGTGGAGCCCTCGCC
GCCGCGCGGACCCTTCGACCTGCGCGACCCCGACCACTTCCCGCCCATGAGGAGCGCCGT
GCAGCACTAGCCCGGCGTCCCCTCACACGACCCTACTCAACGACGACCACAACACACGAT
ACACTGTGCAACTTGTCAACAATGCAACTAGTTTCAATTAAATAACGGCTTACAATATTC
TAAATTGTGTTAGCGTTGAGTTCCGTAACTTTTAGAAAAAATATGGTGAATTGAATTGGA
AAATCTTCGAAACCTCTTTTCAAGCCTTCTTTATATTATTCTGATGCATAAACATTATGA
TGATGGATAACTGTTAGAGCTAACTTCAAGTCAGTTTGGAATTATTCATATAGTCCAAGT
CACTCCAAGTTATGGGACTCTACGATAAGACATAATAACAGCCAGCAGTCGTATTTGTCA
TTAAATGTATTGTAGATACATTTTACAAGTTGTGTCTATCATACACATTGTATACAGATA
TTGCATCTTTGACAAGTTGAATACGATACGTGATCTAGAAATAAATTGTATTGTAATATA
GGTTCTCATTGAGAGTCCTGTCTGTTCAATTAGAAAATAATTGTAGAAGAAATTCCCTAT
GTAGCCTATTCTAATATTCAGATTTTAATGTAGACAGATTTTGCAATAAAATGTAGACAG
GTTTTACCTACAATAGTGAAATTGAAGTAGATATTTACTTTAAAAAATTCTTAATACAAT
TCTGTCTATAAATTTTTTCCTTCGAATTTAATTGAGATAAAGATAAGAAACTAACACAAT
ATTATATTTTTAGACATTGCATTGATAATAATATCTTGACGATCAGACGGGACGTCTATA
GTTTAATTATAATTATGTATTTAGTTAATTCGACTCCGGCTCCTACATTATTGTTGCTTC
ATATTGCAGTTCATTAACGTTTTAAGATCTGAAAATATTTGACGTAACTTTGAGAAGATT
ATAAATAATGAAATGAATGAAGTGCAATATGTGAAGCAGTGTATTTATAAAGACGTGCAT
CCGTTGTTGGATGTGTTATGCCGGAGATGCAGTCTATGAGGTCGCGACGCGGAGGTCACG
TGGCGGGTCACGTGGCCGGTCACGTGGCAGGTCTCGTGGCCGCGGCGACCGCTTGTACAT
ATGTGTAGTCTATGGTCTCTATAGTATACACTTGTATATAGCTTGTGTTGATGAACAGTG
ATGAGTGACGACGGATGATCGAGAACCCTTGACTACAGCGATACTACGTACTGTCATCTT
GTTATTATTATGTATTCTATGAATTTATCAAGCCCTTTTTGTTATCAAAAGGCAATAGAT
GTAATCTAATCAATGTAAATATATGTTTTGCAATTTTAGTAGAAATATTACTGCAAATTG
TGAAAATTTTAAATGCACCGATCTGAACCAAGATTAAAAGTCATATATTATATTTTTTAA
ATATACAAAACCAAACGATTCGAAAAGCAAACGTAAAAAGTGGTTAATTTTACATGGCAA
TACAATGATGTGAAAATCGCGGCGGGCTGGTTTCCCAGTAAGCGATAAATTTAGCCAATA
GAATTGTTAGTGTTGTCATAATTCAAAAATTTGCAGGAATTTAATTATTTTTGGAAATTC
TATGGATTTAGGGATGTTTTAACTATTGGTAGTTATCAATACTTATGTTTTCGGATCGAA
TATGTTTTAGCGTGTTCTATAAACAGTATCTAAAACGTAATTAATGTTACTCCACACACG
TACATATTGTTATACACTGGCAGCTAAACAATTACATTTTAAAGAAGTATTATTCTCCAA
TCACCAGAGATAATATCTGATGAACATAATATATCTGCTACGCCTTATACATAGCTGTAT
AAATTATTGCATATAAATAAAAAAAACATAAATATCAAAAAAAACGTGTCACTATAATCT
TTAACAAAAACATAAAATCTTCAAAATCAAGAGATGAAAACGATATCACTGGCACAAAAA
AAAAAGTAAATCAGAGCACTTCAGTTGAAGTAGGTATTTGTGTAATTGATCTGATGTTAG
TCTGTGGGTAGACATTAACTGTAACTATGATGATATATATTAATGAATGTGAAAATGTAT
TACAATGATTTTAATAGTTAAAAAATATAGAAACACGTGTATTGCTAGTCTCGTGTTCTA
TTTAAATAAAACTGTAAATAAAAAAATGAATAAAATTTTATACAAAACTCAAAAAAAAAA
AAAAAAAAAAAAA
(3733 bp)

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