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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9865c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RING-box_protein_1A_[Papilio_polytes]
Ontology
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016322 P neuron remodeling
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0019788 F NEDD8 transferase activity
GO:0019915 P lipid storage
GO:0022008 P neurogenesis
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
Transcript
Level		FPKM:25.28 TPM:24.77
ORF EntryO_TrvaFAMAMG10435_complete:A_TrvaFAMAMG_TR9865c1_g1_i1
Sequence
(Nucleotide)
AAATAATTGTAAAAAAAGTGTTCTTTGTAATAACTTAAATATTGTTATTCACAGGATGTA
TTACATAGTGGACTGTACTTATTGAAAAAAAAACAAAAATGAATGTTAATTAACAATATT
TTGAATAATTGACTGCCTCACTCAATGTGGTATTTGAACTTGTTTTGTTAATAAAAGACA
AATGCTGACACTTGTATTGTTAAAAAAAAATAAATTGTTACTCATTGGCTTAAATTGAAT
AATTTATCCTATTCAAATCAGTGTTCACTGAGGCTATGTTCAATCTTTGGGCCAAACAAA
AGGTGCCATCCATAAATTACGTCACGAATTTTGAATGAGAGCAGTGGTTCTGAAATCAGT
TTTAAATCTATTTAGATCGTTTTTAAATAATTTAAAAATTATTGAATTTCTTATTTTTTT
CGTAAATTAGATAGTTTAAAGTTCGTGTTTTAACACGTAAATCATAAAAGATTTTGAAAT
GTGACGTCACGAAATTGAGAAAACCCCAAAACTCTTGTCACACTTCGACCCTTTTCCTCC
TCCCTTATGTAAGTTGTGACCTAATTTATGGATGGCTCCTTTTGTTAATTCAGTAAAATT
AAAAAGAACCTCTTTCTTGCGCAATGAGAACATTGGAAAAACTGGACCATTTAGCATTCG
AAAAATATAATTGACATTGGTTTAGCATTTGTTTTCTGTATATTTATTTTCCAATAATTA
AGGTAGAAAATAAAGAAAAGAGCGAAAGTCAAAAGATATTGTGAAATGATCATTGTAAAC
TATGTACTATTAAGAATATGCGACATGAACTTCTCATAGGAAGGTAGTTCGCCCTTGGGA
CTTGACACTCGAAATTTTAATGCACTGAATGCATGTTGTGTGCTAGCTAGTGTCTCATAA
AAGGGTCATGATATTTACTCGAAATAGGACGGCAACGCTTATTTAAACAATTTGGTTTAC
TTTTTAAAATACCAATACCTTGGTATTAAATTCACAAAATAGTGCAGTTTTTTGTTGTGG
TCATGTAAAATTTGCAAATGTAAGTCATTCTGATTGTGCATGTCGTAAAATATTACTAAA
ATACTATAATTATAATATAATGCTAGTAATTGCTATACTAGCTTTGTGATATTCCTTGGG
AATGTGTAAAATTCTGTAAGTTAGAGAAGTTCCACAATGTTAACAAATTAGTGACTGTAA
AATAATAATTAAATAATAAATATCACAATAAAATGCCTCTGGAAATTCTTTTAAACTTTA
TTTAAGTCATTTGTATATTTCTTAATTACCATATAATTTAAAATGTACTCTCAAGAACAT
TTTGAGATGAAAGAGGGAGAAAGAGTAACATTTTTATTTATAATGGTAAGGAAAGTTTAC
TATTTTTATGTTGGATTTATCATTTATACAAGATTTTTCCACAAATTGTCAATTAAAATT
CACAAAGAGAATTTTGTAAGAGTTATTTTATTATTACAAACTTAATAGATATTGACATTT
TAATTCCCCATTATTGAATACTTCTATGCAGGATGCAGCATTCTGATGTTTAGTGTCCAT
ATTTTTGGAACTCCCACTCTCTATTGTCAAGAGGACAAACTTGTCGAGTTTTCAGCCAAC
GAGAAATACAATGGAAGTGGAATGCATGATTACAAACTCCCCAAGCTACTGTGCACTCCT
CACTAGTTGCCGATGCTTGATTTGCTTGGCATTCAATACAGAGATCCATAATGTGATTAC
GGCAAATAGCGCAGTTGTCGACAACGATATCCCAAGCCCAGAGTGCAACAGCATTCCACT
TTTTTACTTCGAATCTCTTTTTGTCGCCTTTGCTGCTACTAGATGAAACCATTTCGACTT
CCTCTTCATCAACATCCATTACAGAAGCCATTTTTATATAAAATTACCCTATTTTATTGA
AAATAACCAATTTTGAGTTGTGTACGGCTGAGGGTTGTGTATTTTTGACAGTTCGAT
(1977 bp)

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