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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9863c2_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pleckstrin_homology-like_domain_family_B_member_2_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:3.63 TPM:3.56
ORF EntryO_TrvaFAMAMG10408_5prime_partial:A_TrvaFAMAMG_TR9863c2_g1_i2
Sequence
(Nucleotide)
ATTGATGGAAAAATAATTAAGTTAGAAAAACAAATAAAAGTGTCTTACGACGGTTTGAAA
GATGAGATAACCAAGATGGCGGAGCTTGTCAGTGGTGCCAACCAAAATAATTCGATTTTG
AAAAATATATCATCGCCGATACAAAACAGCAATGTTTTTGTTGTTGGCAACGATATGAGA
AATGGGCAACTTAATGAATTGTATATCAGGAATGAAATTTACAATAATATTATTAAGAAA
ATTGATAGATTGTTTTGTGGGATGGCGTATCAAGAACGGGTCAAGGAGGAAGAACAGAAG
GAAGCGGAAACAGCTCGTTTGGAAGAAATACTCAACATGTGCGCCGAATACGAACGACAG
ATAACATCAGGGGTACCAATAACACCGACAGAAAAAAGACCTCATAATAAAATAATTACT
AATGGCTCTTTACCTCGAAGCGTTGCACTCAACAATCCCAATTTTGTACAAACCAGCGAA
GGATATTATAAATTCGATACTAGTCACAATCGTACCAACACTTTAACCAAACAAATGCAA
AGAAATCTATCTAGCTACGAAAACTTCGATCCCTCACAAAACGAACAACTCACCCCTGAA
ATAACTATTTCTAATAACTACGAAAACGTAGGCAGAATGGACGAAATAGGCATACCTATT
GACGTGTCTAGTCCTATAACAATTAGAAAAAATCAAACAGATAGTTCTCCTATAGGCAGT
CCATACGAAAACATGTATTTCAGGAACAATTTAAATCCCAAATCGCCTACCACTCAAAGT
CCTAGAACTAGAATAAAAACTACTTTTGCCCACAAAAATGTAAATCCACCTCAGTATTTC
GTTTTTCCCACACCACCTCCCCAAGAAAACAATAAACAACCCAATTTTGATGACATAAAA
GCGAATTTTGATGACAAAATAGAAACAGATGACAAAATAGCTACTGATGACACAAATACG
GGAAACAAAGAATTAACAAATGCTGTGGGAATAGAAAAACAACTTAGTTTAGAAGAAGAT
ATACCCATGATTGATGATTCAGCTCAACCAAACGACATCGAATTTAGATATTCGAAAGTA
GAAAAAGATTTAACTAAAAACAAGAGTTTTGATGACGTGAAAAAGGAATTAATGGCAGAT
ATACCGGAGTTAGAAGAGTTTGAAAAAGATTTGAAAAGAAATAAAAGGGAGAAGATAATT
AATAATATAACTGAAGATATTAAAGCGATTGATATTGATGTTGATTCGATAGATACTATA
TTAGATGATGCAGATGAATTGAAAGTTAAATATGAGAGTTTGAAAGAGGATAGAAGGAGA
TTGGTTACGGAGATACATGAAATTAAAACTAAGATGGCGGAAATTAGGTCTCAAGAAGAT
GATGTTTTGAGAGAGCTGGAAATGGAAAAAGCCCTAATAAAAGGAGAATACGATTCCGAA
ATAGCCATCTTAAACATCGAACAGAAGAAAAAGGCAGATTTGATAGAGAAAACAAGAGAA
ATAGAAGAAGAAATAAGACTTTTAAAAGAGAAGCAAGAATCTAGACAGAATGAGATGAGA
GATAGAGTCGAGATTGCTACTTTGAAGATTGAAAATATTGAAAAAGATCTCAAAAGTAAC
ACAGCAACGGTGGAAGAACTACAAAATGCTCAAGATATACTCGATAATGAAACTAAAATA
TATGAAGATTTGGAGTTTCAGCATTTGGAAGAGGAATCTGAATTGTTATCAAACAAAGAA
GACATACAAAACGAAATAAACATACTTACAAAGAAAATAGACGCTCAAAAAACAAGGATA
TTAACATTAAAATCTGAAGCAAATAACAATTTAACATCAGCTTTAGACGAAACAAAAGTA
TTACATTCAGAATATGTCAAATTACTAAATAACGTAGAAGAATTAACTTCTAAATTACAA
GCTATAGAAAAAGAGCTAAAACCAATAGTTTCAAAACTAAATGAAATAGAAAGAACTCAA
TCTCCAGATAGTGCATTTTTCACGGACCAAAATCGAGGAAAGTCGGGCGAATACGGCTAC
TCACCACAAACATCTGACAGCGACGATCTAGACATAAAATTAACCGATTTCAATGATCAC
AAAAAGATAATAAAAGACAAATTTAACGCTATAGATCAGATGTCTCAATCGATGACAGTT
GATCTAGAAAAACGTGTAACAGATGAAACTAACGGAAGTCCTTCTAAATCTTTTAAAGAG
AAAAAAGGGTTTTGGGAGAGGAATTTCGATTCTTTAAAACGAAAGAAAAAACAGAAATCG
CCTGAAAAAATCGATATAATGTCGCAGAGTTTAAACGAGAACCTATTTTATAACAACGAA
AATATCGAAGATGACATTAATAGGTTCAATAGTTTGAGAAATTCAAAAACTAAAAACGAT
AAAGGACCTATTAAAAGTAACTCGTCATCTAAAATACCGACATTTGCAGCATTAGGAAAG
ATAATGAAAAAAGATTCCTTCAAAAACAAAAATGAAAGCGAAAACAAAAATCGATACGTT
AAAAATCTAAAAACGTCTAACGATAATAAATATAAGGCGAAATCTTCACCGGAAAAAAAC
AAAGTGACTTTTGAAGATTATCCAAAATTGCACAGAAAAAGTTGTGGTGATGAGCCCAGT
TTCAGGATCGACCAGAAAATGTCTGATTCTGGGAAGATTCCCTCACAAGATGATATAGAT
AGGATTTCTAAAGTGACTATAGATGCTCCAATTTTGCCCACGGATACGGATATGAACAGT
TTGGGCAAAAGAACTTTGGACAGTCTTATGGAAGTTGAGAGAAAGAGAATGGAAATGTTA
GAAGAACAAGGGTGTCAAGTGATAGAAAACGAACGAGAAAAAATATCGGAATTGAAACGG
AAAGCGCAAGATGAAACGAAAAAACTTTGGGATCAAAAATACAGAGAGAAGTCATTGGAA
GGAGATCTCAGTCTCGGCAGCATCACTGAAGAAGGAAAAGAAGATCATTTAGAAGATAGC
TATATTAACTCGGCTTTTGATGAGAGTTCGGGCTTGTTTTCATCGTCCATAGAAGAGTTA
CAAGTGAGGAATTCACGCACTGAATCAACTGAGGATGACAAACGTAGCGATGACAGTCGT
CCGCTCAGCCACGCCTCCGATTTCAGCAGAGATAATATATTGTCCCTCACCAACGCGCCA
CGTCGCAGTCGTCGAGGAATCGCTCCTTACAGCGAGTCGCAGAGGCCTCTCACCAGATAC
CTGCCTGTCGATAGAGATGACTTCGATCTACGGAGACACGTCGAATCCGCTGGTCACCAA
GTCGAGTTGTGCCCCTACGTGAGTGTGACCAGCACATCGTGTCGGGGATATTTACACAAA
CTAGGGGCCAAGTTCCACACCTGGTCCAAAAGGTGGTTCGTTTTCGATCGAGAAACGAAA
ACGTTCGTCTACTACTGGGACAAAAGTGAGAAGAAACCGCGCGGCGGAGCTTATTTCCAA
GTAATAGAGGAAGTATACTTAGACCACGGTAACACGTCGAAATCGCCTAATCCACAAACA
ACATTTATCGTTAAAACGCGACAGCGCAGGTACTACTTAATGGCGCCTTCGGGCGAGGCT
GCCAGAATATGGATTGACGTTTTATTCACAGGCGCACAGGGTTATACTGACTACCTCGAA
TGACAGGTGACGTTTGACAGGTGTCAGATGTGACAGCTGTCAAAGTTGTTTTGGGATTTT
TATTGGATCACCAACTTGCGCGCTAATGACAACTGTAGGACAACTGTCAAACGGTGTCTC
ATAGTTTCAATAATAATATTTTATTTAAAGAAACATACAATTCTGAGAAAATATTAAAAA
ACTAAAAAAAAACTAATCTACCTACAAGCTAAAAATAATTATCTGAATGACGAAACAAAT
CTAAATCATGTCGGTCAATACATTCAAAGCTTACATGTTGGTCAGCCGTCACCGTCATTT
GTTTTTACGTTCGTTGGACGTTGGTGATCTAATATGTACATTCACCATAAGAAAGTAAAT
GGTTTTTTTCGAAGGATTTTTGTAATAAAATGCGGGTGTTGTTTTTGGTTTTGGTCGCTA
ATTATGCCACTAATTAGTGTATTTCGTCAATTAAAAAGTCAATATGACAGATGTCAACTG
AACTGTCAAAATGTTAGTGTTGTGCTTATATGGATTCAATAGACAACATTATTCGATAAT
TTTGTAAATTGAAATAAACTTTCAATTTGTCAATTATTGCATTTTTTCTGTAAGGTTTAA
ATGTGCCTTTATTTTTGAAAATGTATGGGTTTGATACCGTAAATAAAAATGAGTACTTAC
TTATGTCTTTGCAATTTAACGAAACAGTATTTTTATATTAAGTACATTATGTATACAAAA
TATATAAAAACGTGCCAATTATTGTGTACAAAAATATATAAATAAAATTATAATATATTC
GAAAATGTAGTGATGATGATAAATAACAAAATTGTAATCAAAAGCTTTTATTCTAAAATT
GTTTGTGACATCACTGATTTTGGATATTCTGGCAACTTTATCTATTTTGATTTAAATTTA
TTTTATTCAGAAAGCATCTAATAATATAATGTATATTTATCTTATGAATTGAATATATCT
GTGCCTTTTAAGAAGACTGAAATAATATACAAACAGGAATTAAATAGATAAACAGTAGGA
ATATATATTATTAAGCTACACAAACTTAAAAAAACATTATATATCTTTAAAGTCGCCCAA
ACCACAATGTTATTGACAATATATTTGTCAAAGTAGTAACAATATTTAAAAAGATATCGT
TAAATATGTAACATTATTTCAATAATATTGTGTTTGTGGATAGCTTTATTGTTCCTCTGA
TGCAATTTAGATTCTCATATTCGAATTCTGATGTAGACATTTTTTTAGTCACAAGATTTT
TGAAATGTTATTTTTCCATATAAGAGAGTTTTTGAATATTTTCTTTATCCGAATAAAGAA
CCCGAGTTATAAATTTGTATACCCATTTTTGTGTCTGTTGTAGCAAGATCGTGTAATTTT
TAATAAACAAAATTTCGAGAATTTTCGAATTTTACGAAATTGTAAAAATGAATTATACGA
AAATGCCTTGATAATATGAAAAGTATCACGGTTTTGAAAATCATTATTGAAATTTCGTGG
TAAATTGCAATAATGGTAAGTAAAATATAAAAAATTATAGGCTCTTGCTCTTCGTTAAAA
ACATAGTAGATACACAATTAAACGTAAAAATGGTCCATCTAATAGTTTATTTTCTAACTA
AAATCATATAATCAATGAATTTTAATGAAATATTTTTACACTGATTCAATTCAGAAAAGT
ATTAAATTCTTCATCTATTTCCTTTTAAAGAACT
(5374 bp)

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