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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9863c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Pleckstrin-likey-like_domain_family_B_member_1_[Papilio_xuthus]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0016020 C membrane
GO:0031252 C cell leading edge
GO:0045111 C intermediate filament cytoskeleton
GO:0045180 C basal cortex
GO:0045184 P establishment of protein localization
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:1903690 P negative regulation of wound healing, spreading of epidermal cells
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
Transcript
Level		FPKM:2.35 TPM:2.30
ORF EntryO_TrvaFAMAMG10406_complete:A_TrvaFAMAMG_TR9863c2_g1_i1
Sequence
(Nucleotide)
CGTTTGTTGTGTTGTGTTGTTTACATTTTTAGTTTTTATCAAAAAACTTTGAAATAAACT
TTTATTTTACAATAACTTTAAGTTTAATAAGTGTAATACGTGCGTGTTTTGTGTTCTGTG
CATCTGTGATATACTTACTCGATTACCAATCAAGTGTGATAAATAATATTAGTCATTTCA
ATAGAATACTTTTGTGTTTACGATTCAACTATTTTACAAATTCGAAAATCGAATCTCCGA
AAAAGTACGATGACGACACGCGTCCGATCCGACACGCGATCCGATTAGTCGTGTCGTCAC
ATCGTCGCCATGTCCGGCCTTCAGACCAGGAATGATGAGAGTATCAATGGTGTGGATGTC
CGGGAACAGGGCAGCGCTTTGAGAGTGGCCACAAACACCCCTCATCTCGTGAGTCTCGGC
ACTGGACGTCTGAGCACGGCTGTCACATTACATCCTATCAAACAAGGTCGAGTAACAATA
GGTTCCGATCCAACATGCGACATATACGTAATGGGAACTGGAGTAGCCAGCGTCCATTGC
CGCGTCGAGAACTCACATGGAGTGGTCACTTTGTACCCTATAAGTGGCAGCACATTGCTT
GATGGTTTACCAGTGGAAAAACCCACCAGGCTGTCTCAAGGTAGCATGCTGACAATAGGC
AGATCCAATTACCTTCGTTTCAACCACCCTGCCGAGGCGAAGCTGATGAAATCCGTCCTC
CCTTCTGGTCATCTATCGATGCCTCCCATACAGTATCAGCCGAACGAAGAGTGCATTACT
ACTGGTTTTTGCACAACAGAACGCTACCAAAACTCATACAAAGACACGTCTTTAACGCAA
CTAGACCACGAGCTAAACTTGACTCTAAAAGAGCTAAAAAAGCCCCCAGTCCCCCCAAAA
AAGCTGTTCCAATCCCCAGAACAGGACGATAAATCCCTAAAATCCAAAATTGCCAAATTT
GAGTGCAACAAACAAAAAGTGGGCAGAAGTCAGTTCTACACCAACGAATACGAAATTTCG
CCCAAAGTTTTTAGTGCAAATTCATTGACTGTCAACACGCCTGCTAAAGATGTTTTAGGG
GATAAATTAATGCCCAATTATATGAAAAAGGGCAATGTTGATGTGGAGTTTAATGAGAGA
TTTGGTAGTGTGGGCAAAGTTGTCTGTTTGTCGTATGAGGGGCAACAGTACTCGCCGGTG
TATGTTAATAATTATGACAGAAGCATTGACGCTGAAAGCAGGAGGATTAAGGCGTATCAA
GAACGGGTCAAGGAGGAAGAACAGAAGGAAGCGGAAACAGCTCGTTTGGAAGAAATACTC
AACATGTGCGCCGAATACGAACGACAGATAACATCAGGGGTACCAATAACACCGACAGAA
AAAAGACCTCATAATAAAATAATTACTAATGGCTCTTTACCTCGAAGCGTTGCACTCAAC
AATCCCAATTTTGTACAAACCAGCGAAGGATATTATAAATTCGATACTAGTCACAATCGT
ACCAACACTTTAACCAAACAAATGCAAAGAAATCTATCTAGCTACGAAAACTTCGATCCC
TCACAAAACGAACAACTCACCCCTGAAATAACTATTTCTAATAACTACGAAAACGTAGGC
AGAATGGACGAAATAGGCATACCTATTGACGTGTCTAGTCCTATAACAATTAGAAAAAAT
CAAACAGATAGTTCTCCTATAGGCAGTCCATACGAAAACATGTATTTCAGGAACAATTTA
AATCCCAAATCGCCTACCACTCAAAGTCCTAGAACTAGAATAAAAACTACTTTTGCCCAC
AAAAATGTAAATCCACCTCAGTATTTCGTTTTTCCCACACCACCTCCCCAAGAAAACAAT
AAACAACCCAATTTTGATGACATAAAAGCGAATTTTGATGACAAAATAGAAACAGATGAC
AAAATAGCTACTGATGACACAAATACGGGAAACAAAGAATTAACAAATGCTGTGGGAATA
GAAAAACAACTTAGTTTAGAAGAAGATATACCCATGATTGATGATTCAGCTCAACCAAAC
GACATCGAATTTAGATATTCGAAAGTAGAAAAAGATTTAACTAAAAACAAGAGTTTTGAT
GACGTGAAAAAGGAATTAATGGCAGATATACCGGAGTTAGAAGAGTTTGAAAAAGATTTG
AAAAGAAATAAAAGGGAGAAGATAATTAATAATATAACTGAAGATATTAAAGCGATTGAT
ATTGATGTTGATTCGATAGATACTATATTAGATGATGCAGATGAATTGAAAGTTAAATAT
GAGAGTTTGAAAGAGGATAGAAGGAGATTGGTTACGGAGATACATGAAATTAAAACTAAG
ATGGCGGAAATTAGGTCTCAAGAAGATGATGTTTTGAGAGAGCTGGAAATGGAAAAAGCC
CTAATAAAAGGAGAATACGATTCCGAAATAGCCATCTTAAACATCGAACAGAAGAAAAAG
GCAGATTTGATAGAGAAAACAAGAGAAATAGAAGAAGAAATAAGACTTTTAAAAGAGAAG
CAAGAATCTAGACAGAATGAGATGAGAGATAGAGTCGAGATTGCTACTTTGAAGATTGAA
AATATTGAAAAAGATCTCAAAAGTAACACAGCAACGGTGGAAGAACTACAAAATGCTCAA
GATATACTCGATAATGAAACTAAAATATATGAAGATTTGGAGTTTCAGCATTTGGAAGAG
GAATCTGAATTGTTATCAAACAAAGAAGACATACAAAACGAAATAAACATACTTACAAAG
AAAATAGACGCTCAAAAAACAAGGATATTAACATTAAAATCTGAAGCAAATAACAATTTA
ACATCAGCTTTAGACGAAACAAAAGTATTACATTCAGAATATGTCAAATTACTAAATAAC
GTAGAAGAATTAACTTCTAAATTACAAGCTATAGAAAAAGAGCTAAAACCAATAGTTTCA
AAACTAAATGAAATAGAAAGAACTCAATCTCCAGATAGTGCATTTTTCACGGACCAAAAT
CGAGGAAAGTCGGGCGAATACGGCTACTCACCACAAACATCTGACAGCGACGATCTAGAC
ATAAAATTAACCGATTTCAATGATCACAAAAAGATAATAAAAGACAAATTTAACGCTATA
GATCAGATGTCTCAATCGATGACAGTTGATCTAGAAAAACGTGTAACAGATGAAACTAAC
GGAAGTCCTTCTAAATCTTTTAAAGAGAAAAAAGGGTTTTGGGAGAGGAATTTCGATTCT
TTAAAACGAAAGAAAAAACAGAAATCGCCTGAAAAAATCGATATAATGTCGCAGAGTTTA
AACGAGAACCTATTTTATAACAACGAAAATATCGAAGATGACATTAATAGGTTCAATAGT
TTGAGAAATTCAAAAACTAAAAACGATAAAGGACCTATTAAAAGTAACTCGTCATCTAAA
ATACCTACTTTCGCAGCATTAGGAAAGATAATGAAAAAAGATTCCTTCAAAAACAAAAAT
GAAAGCGAAAACAAAAATCGATACGTTAAAAATCTAAAAACATCAAATGATAATAAATAT
AAAGCTAAATCGTCACCGGAAAAAAAACAAAGTGACTTTTGAAGATTATCCAAAATTGCA
CAGAAAAAGTTGTGGTGATGAGCCCAGTTTCAGGATCGACCAGAAAATGTCTGATTCTGG
GAAGATTCCCTCACAAGATGATATAGATAGGATTTCTAAAGTGACTATAGATGCTCCAAT
TTTGCCCACGGATACGGATATGAACAGTTTGGGCAAAAGAACTTTGGACAGTCTTATGGA
AGTTGAGAGAAAGAGAATGGAAATGTTAGAAGAACAAGGGTGTCAAGTGATAGAAAACGA
ACGAGAAAAAATATCGGAATTGAAACGGAAAGCGCAAGATGAAACGAAAAAACTTTGGGA
TCAAAAATACAGAGAGAAGTCATTGGAAGGAGATCTCAGTCTCGGCAGCATCACTGAAGA
AGGAAAAGAAGATCATTTAGAAGATAGCTATATTAACTCGGCTTTTGATGAGAGTTCGGG
CTTGTTTTCATCGTCCATAGAAGAGTTACAAGTGAGGAATTCACGCACTGAATCAACTGA
GGATGACAAACGTAGCGATGACAGTCGTCCGCTCAGCCACGCCTCCGATTTTAGCAGAGA
TAATATACTGTCCCTCACCAACGCGCCACGTCGCAGTCGTCGAGGAATCGCTCCTTACAG
CGAATCGCAGAGACCTCTCACCAGATACCTGCCTGTCGATAGAGATGACTTCGATCTACG
GAGACACGTCGAATCCGCTGGTCACCAAGTCGAGTTGTGCCCCTACGTGAGTGTGACCAG
CACATCGTGTCGGGGATATTTACACAAACTAGGGGCCAAGTTTCATACCTGGTCCAAAAG
GTGGTTCGTTTTCGATCGAGAAACGAAAACGTTCGTCTACTACTGGGACAAAAGTGAGAA
GAAACCGCGCGGCGGAGCTTATTTCCAAGTAATAGAGGAAGTATACTTAGACCACGGTAA
CACGTCGAAATCGCCTAATCCACAAACAACATTTATCGTTAAAACGCGACAGCGCAGGTA
CTACTTAATGGCGCCTTCGGGCGAGGCTGCCAGAATATGGATTGACGTTTTATTCACAGG
CGCACAGGGTTATACTGACTACCTCGAATGACAGGTGACGTTTGACAGGTGTCAGATGTG
ACAGCTGTCAAAGTTGTTTTGGGATTTTTATTGGATCACCAACTTGCGCGCTAATGACAA
CTGTAGGACAACTGTCAAACGGTGTCTCATAGTTTCAATAATAATATTTTATTTAAAGAA
ACATACAATTCTGAGAAAATATTAAAAAACTAAAAAAAAACTAATCTACCTACAAGCTAA
AAATAATTATCTGAATGACGAAACAAATCTAAATCATGTCGGTCAATACATTCAAAGCTT
ACATGTTGGTCAGCCGTCACCGTCATTTGTTTTTACGTTCGTTGGACGTTGGTGATCTAA
TATGTACATTCACCATAAGAAAGTAAATGGTTTTTTTCGAAGGATTTTTGTAATAAAATG
CGGGTGTTGTTTTTGGTTTTGGTCGCTAATTATGCCACTAATTAGTGTATTTCGTCAATT
AAAAAGTCAATATGACAGATGTCAACTGAACTGTCAAAATGTTAGTGTTGTGCTTATATG
GATTCAATAGACAACATTATTCGATAATTTTGTAAATTGAAATAAACTTTCAATTTGTCA
ATTATTGCATTTTTTCTGTAAGGTTTAAATGTGCCTTTATTTTTGAAAATGTATGGGTTT
GATACCGTAAATAAAAATGAGTACTTACTTATGTCTTTGCAATTTAACGAAACAGTATTT
TTATATTAAGTACATTATGTATACAAAATATATAAAAACGTGCCAATTATTGTGTACAAA
AATATATAAATAAAATTATAATATATTCGAAAATGTAGTGATGATGATAAATAACAAAAT
TGTAATCAAAAGCTTTTATTCTAAAATTGTTTGTGACATCACTGATTTTGGATATTCTGG
CAACTTTATCTATTTTGATTTAAATTTATTTTATTCAGAAAGCATCTAATAATATAATGT
ATATTTATCTTATGAATTGAATATATCTGTGCCTTTTAAGAAGACTGAAATAATATACAA
ACAGGAATTAAATAGATAAACAGTAGGAATATATATTATTAAGCTACACAAACTTAAAAA
AACATTATATATCTTTAAAGTCGCCCAAACCACAATGTTATTGACAATATATTTGTCAAA
GTAGTAACAATATTTAAAAAGATATCGTTAAATATGTAACATTATTTCAATAATATTGTG
TTTGTGGATAGCTTTATTGTTCCTCTGATGCAATTTAGATTCTCATATTCGAATTCTGAT
GTAGACATTTTTTTAGTCACAAGATTTTTGAAATGTTATTTTTCCATATAAGAGAGTTTT
TGAATATTTTCTTTATCCGAATAAAGAACCCGAGTTATAAATTTGTATACCCATTTTTGT
GTCTGTTGTAGCAAGATCGTGTAATTTTTAATAAACAAAATTTCGAGAATTTTCGAATTT
TACGAAATTGTAAAAATGAATTATACGAAAATGCCTTGATAATATGAAAAGTATCACGGT
TTTGAAAATCATTATTGAAATTTCGTGGTAAATTGCAATAATGGTAAGTAAAATATAAAA
AATTATAGGCTCTTGCTCTTCGTTAAAAACATAGTAGATACACAATTAAACGTAAAAATG
GTCCATCTAATAGTTTATTTTCTAACTAAAATCATATAATCAATGAATTTTAATGAAATA
TTTTTACACTGATTCAATTCAGAAAAGTATTAAATTCTTCATCTATTTCCTTTTAAAGAA
CT
(6362 bp)

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