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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9853c0_g1_i7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_voltage-dependent_calcium_channel_type_A_subunit_alpha-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0002027 P regulation of heart rate
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006887 P exocytosis
GO:0006914 P autophagy
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007602 P phototransduction
GO:0007619 P courtship behavior
GO:0007632 P visual behavior
GO:0008331 F high voltage-gated calcium channel activity
GO:0008332 F low voltage-gated calcium channel activity
GO:0008344 P adult locomotory behavior
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016057 P regulation of membrane potential in photoreceptor cell
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042045 P epithelial fluid transport
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048786 C presynaptic active zone
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055085 P transmembrane transport
GO:0070050 P neuron cellular homeostasis
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:0.38 TPM:0.38
ORF EntryO_TrvaFAMAMG10270_5prime_partial:A_TrvaFAMAMG_TR9853c0_g1_i7
Sequence
(Nucleotide)
GGTTTTTCAATTACTCCCGGCACTTCATCACTAAATGGCAGTACTATAAACAAAGCGACG
ACTACGCGGATATCCTCAAGTACTCGAATATGGGTTTTACTGGAATGTTTTCCGTGGAAA
CGGTGTTGAAAATCATCGCTTACGGTGTCAAAAATTTTTTCAAAGATCCATGGAATACTT
TTGATTTCATTACGGTCATTGGGAGTATTATTGACGCTCTGATTATGGAATTTGGCGAGA
ACACTTTCAACGTCGGTTTCCTTCGCCTGTTTCGGGCCGCGCGACTGATCAAGCTGCTCA
GACAGGGTTATACCATTCGGATACTCCTCTGGACGTTTGTACAGAGTTTCAAAGCCTTAC
CCTATGTGTGCCTTCTCATCGCGATGCTATTTTTCATCTACGCCATCATCGGAATGCAGG
TGTTCGGTAATATAGAATTAACGCCCGAAGTAGATATAAACAGACACAATAATTTTCAGA
GCTTCATTCAGGCCTTGATGCTTTTATTCAGGTGTGCCACGGGTGAATCGTGGCCTAATA
TAATGTTAGCTTGTTTGAAACCAGCTAAATGTGATGAGCGGGCTGGAAAACCCCCAAACG
AAGAATGCGGAAGCACTCTTGCTTATGCATACTTTGTATCTTTTATATTCTTCTGTTCTT
TTCTCATGTTGAATTTGTTCGTCGCCGTCATCATGGATAATTTTGATTATCTAACGAGAG
ATTCATCTATTCTTGGTGCTCATCATCTTGACGAATTTGTTAGGATATGGGCAGAGTATG
ATCCAAATGCAACAGGGAAAATTCATTACACAGAAATGTATGATATGTTAAAAAACATGG
ATCCTCCATTGGGGTTTGGAAACAAATGCCCAAACAGACTCGCGTATAAGAAACTCATTA
GAATGAACATGCCGCTAGATGACGAAGGGAAAGTTAATTTTACTACAACACTGTTTGCCT
TAATACGAGAAAATTTAAATATTAAAATGAGATCTGCTGAAGAAATGGACCAAGCGGACG
AAGAACTTAGAGAAACAATAACCCACATATGGCCGTTACAATCGAAGAAGATGCTCGATT
TGCTGGTGCCCAGGAATGACGTGCTCAACCAAGGGAAACTCACTGTTGGGAAGATCTATG
CCGGTCTTTTAATATTAGAAAGTTGGAGGTCAACTAGGTTTGGCCAGACTGAACCCCGGG
GTGACCAGGCATACAACGAGAATAGCCCTACGGCCATTCAGCCGGTAGTATTTATATATT
TTACTGAACGAAGACCTAAATTTTTCTTGCACTATTTCTAGATATTTTTGTTTATTATGA
ATTTCTTCTCGCATCTTGTCTTAACGTTAAATCACTTATATAAACTAAATAACATGAACG
ATGACATTATAACTAAATAAATCCATTTTTTATAATTAAATAAAGACGAGTAGTTTTAGA
TGAAGGAAATGATTTTGAATTAGTACTAGCCAATAGTGGAGCACTAATGATAGTTTTGAA
ATGAATGAGAAATTGCGTCGAGAACGCATATTGCCTGGCCAAATGTCAGGGTAAACCACA
ATATAGTGACCTGTCCTATAGTTGCAAAATTTAAAGTAGACGGGTGTCTGTGTTTAAATG
TAGTTTAGTTCAGTAGATGAATACATTTCTCTTTTTTAAAACATCAATTTGCTCGCTATC
AACTAGAAGTTATAATACAAACTATGCATCAAGTTTTATTTTACAGGAAAATTAATGATA
ACATTTGTGCATGACGGTTAATATGATAATAATAACCTTTTATCTTTTGCTTAAGTTATT
TGAAGTATTCATAAATCGATTACATTTTGGCTCAATTACTATTTTCGAATTTTAGAAGCC
TATTATTATTATGAAACCATGCTTATACGCTGCTCTCTCGCCTTATAAGAAATGTCATAA
ATAGCATTCTAAACTACGTAATTTAAAATTGGGTTCATAAATTGAAGCATGCTGATTAAT
AAAAAAATAAATAAAATTGATGATAAACAATAAATTATGAAATCTTTTTATGCCTCTGGC
TTCAATATTTATAGCACATTATTTGAGAGCACATTTGTTTAATAACCATGCTTTGTAATT
TTGCAGCTCTTTGTCATATTTAATACATTTCGATGTATTCTCTACATTCCGAAACTCGAG
TCTAAACACACACATACAACTAAATCGATAGGTTTATTCTATAGACAAACTCCAAAGTAG
TCCAATGCCCCACTCACTCAAATAATGTCCACGGTCTAATCATTTGACTATACTCACACA
TACACAACTCGAACTTCAACATGGACACGATGTGGAGGTTTGCGCAGACTCATGTAGGCT
TTGAAGTTAGCTGGGAGCTTAACTGAGTGTGACATGAGCATGCGCAAGTTTAGTGCGTGG
GGTATGATACGGGGTGCGTGGTGCAGAAGGCGACCTTGTTTAACTGCCTGCTGAATGTGG
CTGCGGGCCTGGGGCCGGGCTCCCGGACCGGCTCGCTCAGCAACGAGGGACCGGTCGCGG
ACGGACACCCGGACCACACCTTAGCGAACCTCGCACGACGCAATACCAGAAGATCTTTCA
AGAACAACAAAAAGGTGATTACTAACTTGCAAAGGGTGAAAATTGACCTGATTGTAACTG
TTGTAAACCTAATCAGTGAAAGCCTCTAGTATTTGTCTAGTGCGATCGATGTACCCACCA
ATATCATAGCGGAATCCAAAATTACCCTATTCGTTGTCCTACTTTACAAAATTACATAAA
TAATTGGCATATTGTTGAACATTGTAACGTGATGTTGGTTCATTATGTGGTTTGTAAATG
TGTCTGCTAAATGGGTGTTCCTATAGCAACCTACATCGATGCATTACATTGTGTCATAGA
TAGTCGGTGTTGTATTAAAATGTATGTTCGAAGCTTTCTTTGGGTGTTTAAGTCATTATA
ATAAGATAATTATTTGTCTAATTTTAGATGTATGAACAGTCTCGTCGTTTTATAAAGTGT
AATTAGGGCCTTAGGCTCAACATAGTATCGATTCGTCTTGTGTTTTAAGTCCTAATAATT
AATTACAAACATTTTAAAGTTTACAGATGGTTGTTGATGTTTAGGTAAAGTTTTA
(3115 bp)

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