SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9853c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_voltage-dependent_calcium_channel_type_A_subunit_alpha-1_isoform_X1_[Bombyx_mori]
Ontology
GO:0002027 P regulation of heart rate
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005509 F calcium ion binding
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006887 P exocytosis
GO:0006914 P autophagy
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007275 P multicellular organism development
GO:0007602 P phototransduction
GO:0007619 P courtship behavior
GO:0007632 P visual behavior
GO:0008331 F high voltage-gated calcium channel activity
GO:0008332 F low voltage-gated calcium channel activity
GO:0008344 P adult locomotory behavior
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016057 P regulation of membrane potential in photoreceptor cell
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042045 P epithelial fluid transport
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048786 C presynaptic active zone
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055085 P transmembrane transport
GO:0070050 P neuron cellular homeostasis
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0097352 P autophagosome maturation
Transcript
Level		FPKM:1.02 TPM:1.00
ORF EntryO_TrvaFAMAMG10264_complete:A_TrvaFAMAMG_TR9853c0_g1_i6
Sequence
(Nucleotide)
CGACGCGCCGCGCCCATGCCCCTAAGTCTGGTTGGCGGCAGCGCAGGAGGCGGCGGGCGC
GCAGGCTCGCGCGGCGCCAGCTGATACCATGGGCGGCGCGCACCAGCCCGCAACTCCGGG
GCCCAGCTCGCTATTTATACTTTCCGACAGAAATCCCATTCGGAGCTATACAAAATTCAT
CATCGAGTGGCCACCTTTCGAGTACGCGGTGCTGCTTACCATCATCGCCAACTGCGTGGT
GCTGGCGCTGGAGGAGCATCTGCCCAACGGCGATAGGACCATCTTAGCACAGAATCTGGA
AAAGACCGAGAAGATCTTTTTAGGCATATTTTGTGTAGAAGCATCGTTAAAAATATTAGC
CTTAGGTTTTGTTTTACATAAGGGATCTTATCTTAGAAATATTTGGAACATCATGGATTT
TTTTGTTGTTTTAACGGGTATCGTCACCCAGATGCCGTTCGTATCCGGAGTCGACTTCAG
GACCTTGCGTGCCATTAGGGTGCTGAGGCCCCTTAAATTAGTATCGGGAGTTCCTAGTCT
ACAAGTGGTCCTGAAGTCTATAATAAAAGCGATGGCCCCGCTGCTGCAGATCGGCCTGTT
GGTGCTTTTCGCGATTGTTATATTTGCAATCATCGGTCTCGAGTTCTACTCGGGGGCGCT
GCATAAGACTTGTTATAGTTTAGAAGATATTAGTCAAATAGTGAATGAGGGTGAGAGCGC
GACGCCGTGCAACGCCGACAACCAGACGCTCGCTCCTTACGGGGCGAACGTCTGCGCGGA
GGACGTCAGCACGTGCATAGAGAAGTGGGAGGGACCGAACAGGGGGATCACGTCGTTCGA
TAACATCGGGTTCGCCATGCTCACAGTCTTCCAGTGCATCACCATGGAGGGCTGGACCGC
CATCCTCTATTGGACGAATGACGCGCTAGGTTGTGCGTTCAACTGGATTTACTTTGTGCC
TCTAATAGTATTGGGTTCATTCTTTATGCTCAATTTAGTTCTCGGTGTCCTTAGCGGTGA
ATTCGCTAAAGAAAGAGAGAAAGTAGAAAACAGACAAGAATTTCTAAAATTACGAAGACA
GCAGCAGTTAGAGAAAGAACTCAACGGTTACGTTGAGTGGATATGTAAAGCAGAGGAAGT
TATATTAGCAGAAGAAAGAACTACAGAAGAAGAAAGAATGCATATTATAGAAGCACGAAG
AAGAGCAGCGGCCAAAAAGAAATTAAAAAACTTAGGGAAAAGTAAAAGCACCGACACAGA
AGAAGAAGAACAAGATGAAGAATGTGGAGACGACGGGTTTCTGAAAGGCAAATCGCGGTC
GGTCGGTAAATGTGCTGATTTCTGGCGGGCTGAGAAAAGGTTTCGTTTTTGGATAAGGCA
CACAGTGAAAACTCAGTGGTTCTATTGGTCCGTTATTGTATTGGTGCTCTTCAACACGAT
ATGCGTCGCCGTCGAGCACTACGATCAGCCAGAATGGCTCACTTCGTTTTTATATTACGC
AGAATATGTATTTCTCGGTTTATTTATGATGGAGATGTTAGTTAAAATGTACGCACTGGG
TCCACGAATTTACTTCGAATCTTCTTTCAACCGCTTCGACTGCGTCGTCATTTCCGGTTC
GATCTTCGAGGTCGTCTGGTCGGAAGTGAAGGGCGGCTCCTTCGGTCTTTCTGTCTTGAG
AGCTCTGAGACTGTTAAGGATATTCAAGGTGACAAAATACTGGTCATCGCTGAGAAACCT
GGTGATATCTCTCCTGAACTCGATGCGGTCGATCATATCGTTGCTGTTCCTGTTGTTCTT
GTTCATTCTTATCTTCGCTTTACTCGGCATGCAGCTCTTCGGAGGACAGTTCAACTTCGA
GGAAGGCACGCCGCCGACCAACTTCAACACCTTTCCTATTGCGCTACTTACTGTCTTCCA
GATTCTCACAGGTGAAGATTGGAACGAGGTGATGTACCACGGCATTCAGTCTCAAGGCGG
TATTCAGAGAGGCATGCTCTACTCTTTATACTTCATCATTCTGGTGTTGTTTGGTAACTA
CACCCTATTGAACGTGTTCCTTGCCATCGCCGTCGATAACTTGGCCAATGCTCAGGAGTT
GACGGCGGCTGAGGAGGAACAAGTTGAAGAAGACAAAGAAAAGCAACAACAAAACAAAAA
GAAAGAAGAGGCCAAAAAGGATGAAGAAGAAGAGATCACAGATGGACCAAAACCAATGCT
GCCATATTCGTCCATGTTTATTTTATCACCTACTAATCCAATAAGAAGAGGCGCACACTG
GGTTGTAAATTTAAGATATTTTGATTTTTTTATCATGGTAGTTATATGTATGAGTTCAGC
CGCTTTAGCAGCAGAAGATCCCGTACGCGAAGAAAGTAAATGGAACGACATCCTGAACTA
CTTCGACTACGCGTTCACGGGCGTGTTCACGGTGGAGATGCTGCTGAAGATCATAGACCT
CGGCATCCTGTTCCACCCGGGCGCGTACCTTCGCGACCTCTGGAACATCATGGATGCCGC
CGTCGTTATATGCGCGCTAGTCAGCTTTGGATTCGAAATAGGTGGTGTAAAGAAAAGTGC
GGGACAAAATTTATCGACTATAAAATCGTTAAGAGTGCTTCGTGTGTTAAGACCTTTAAA
AACTATAAAACGTGTTCCAAAACTAAAAGCAGTGTTTGACTGTGTTGTGAACTCTTTGAA
AAACGTCATAAACATTCTCATTGTGTATATATTGTTTCAATTCATATTCGCTGTAATCGC
GGTACAACTTTTTAATGGTAAATTTTTTTACTGCTCTGATATCAGTAAGAATACAAAGAA
AGACTGCCAAGGGTCGTACTTCGTGTACGAGTCGAATAGTTTATTGCCGCGCATTCAGAA
GCGCACGTGGACGACGCAATCGTTCCACTACGACAACGTCGCCTCCGCCATGCTCACGCT
CTTCGCCGTGCAGACCGGGGAGGGGTGGCCTCAAGTATTACAAAACTCGATGGCCGCAAC
GTACGAAGAAAGGGGACCCATACAAAATTTTCGTATAGAAATGTCCATATTTTATATAGT
TTACTTCGTGGTTTTTCCGTTCTTCTTCGTTAATATATTCGTAGCTCTCATTATTATTAC
ATTTCAAGAGCAGGGTGAAGCTGAATTACAAGACGGTGAAATAGATAAGAATCAGAAATC
ATGTATAGACTTCACGATAGAGGCGAGACCTCTCGAGAGGTACATGCCGAGTAAAAGAGC
CAGTTTTAAGTACAAAGTGTGGAGGATAGTCGTTTCGACGCCTTTTGAGTATCTCATCAT
GACACTTATTGTCCTCAACACATTATTGCTCATGATGAAGTTTCACGAGGCTCCACCACT
ACTCATGGACTCGTTAACATTCATGAATCTGGTCTTTACGATCTTCTTCCTTCTCGAGAC
TGTACTGAAGCTGATCGCCTTCGGTTGTACGAATTTTTTCAAAGATCCATGGAATACTTT
TGATTTCATTACGGTCATTGGGAGTATTATTGACGCTCTGATTATGGAATTTGGCGAGAA
CACTTTCAACGTCGGTTTCCTTCGCCTGTTTCGGGCCGCGCGACTGATCAAGCTGCTCAG
ACAGGGTTATACCATTCGGATACTCCTCTGGACGTTTGTACAGAGTTTCAAAGCCTTACC
CTATGTGTGCCTTCTCATCGCGATGCTATTTTTCATCTACGCCATCATCGGAATGCAGGT
GTTCGGTAATATAGAATTAACGCCCGAAGTAGATATAAACAGACACAATAATTTTCAGAG
CTTCATTCAGGCCTTGATGCTTTTATTCAGGTGTGCCACGGGTGAATCGTGGCCTAATAT
AATGTTAGCTTGTTTGAAACCAGCTAAATGTGATGAGCGGGCTGGAAAACCCCCAAACGA
AGAATGCGGAAGCACTCTTGCTTATGCATACTTTGTATCTTTTATATTCTTCTGTTCTTT
TCTCATGTTGAATTTGTTCGTCGCCGTCATCATGGATAATTTTGATTATCTAACGAGAGA
TTCATCTATTCTTGGTGCTCATCATCTTGACGAATTTGTTAGGATATGGGCAGAGTATGA
TCCAAATGCAACAGGGAAAATTCATTACACAGAAATGTATGATATGTTAAAAAACATGGA
TCCTCCATTGGGGTTTGGAAACAAATGCCCAAACAGACTCGCGTATAAGAAACTCATTAG
AATGAACATGCCGCTAGATGACGAAGGGAAAGTTAATTTTACTACAACACTGTTTGCCTT
AATACGAGAAAATTTAAATATTAAAATGAGATCTGCTGAAGAAATGGACCAAGCGGACGA
AGAACTTAGAGAAACAATAACCCACATATGGCCGTTACAATCGAAGAAGATGCTCGATTT
GCTGGTGCCCAGGAATGACGTGCTCAACCAAGGGAAACTCACTGTTGGGAAGATCTATGC
CGGTCTTTTAATATTAGAAAGTTGGAGGTCAACTAGGTTTGGCCAGACTGAACCCCGGGG
TGACCAGGCATACAACGAGAATAGCCCTACGGCCATTCAGCCGGTAGTATTTATATATTT
TACTGAACGAAGACCTAAATTTTTCTTGCACTATTTCTAGATATTTTTGTTTATTATGAA
TTTCTTCTCGCATCTTGTCTTAACGTTAAATCACTTATATAAACTAAATAACATGAACGA
TGACATTATAACTAAATAAATCCATTTTTTATAATTAAATAAAGACGAGTAGTTTTAGAT
GAAGGAAATGATTTTGAATTAGTACTAGCCAATAGTGGAGCACTAATGATAGTTTTGAAA
TGAATGAGAAATTGCGTCGAGAACGCATATTGCCTGGCCAAATGTCAGGGTAAACCACAA
TATAGTGACCTGTCCTATAGTTGCAAAATTTAAAGTAGACGGGTGTCTGTGTTTAAATGT
AGTTTAGTTCAGTAGATGAATACATTTCTCTTTTTTAAAACATCAATTTGCTCGCTATCA
ACTAGAAGTTATAATACAAACTATGCATCAAGTTTTATTTTACAGGAAAATTAATGATAA
CATTTGTGCATGACGGTTAATATGATAATAATAACCTTTTATCTTTTGCTTAAGTTATTT
GAAGTATTCATAAATCGATTACATTTTGGCTCAATTACTATTTTCGAATTTTAGAAGCCT
ATTATTATTATGAAACCATGCTTATACGCTGCTCTCTCGCCTTATAAGAAATGTCATAAA
TAGCATTCTAAACTACGTAATTTAAAATTGGGTTCATAAATTGAAGCATGCTGATTAATA
AAAAAATAAATAAAATTGATGATAAACAATAAATTATGAAATCTTTTTATGCCTCTGGCT
TCAATATTTATAGCACATTATTTGAGAGCACATTTGTTTAATAACCATGCTTTGTAATTT
TGCAGCTCTTTGTCATATTTAATACATTTCGATGTATTCTCTACATTCCGAAACTCGAGT
CTAAACACACACATACAACTAAATCGATAGGTTTATTCTATAGACAAACTCCAAAGTAGT
CCAATGCCCCACTCACTCAAATAATGTCCACGGTCTAATCATTTGACTATACTCACACAT
ACACAACTCGAACTTCAACATGGACACGATGTGGAGGTTTGCGCAGACTCATGTAGGCTT
TGAAGTTAGCTGGGAGCTTAACTGAGTGTGACATGAGCATGCGCAAGTTTAGTGCGTGGG
GTATGATACGGGGTGCGTGGTGCAGAAGGCGACCTTGTTTAACTGCCTGCTGAATGTGGC
TGCGGGCCTGGGGCCGGGCTCCCGGACCGGCTCGCTCAGCAACGAGGGACCGGTCGCGGA
CGGACACCCGGACCACACCTTAGCGAACCTCGCACGACGCAATACCAGAAGATCTTTCAA
GAACAACAAAAAGGTATTGGAACTCCCAGGATCTCACCATGCGTCTTTGGAATCGCTGGA
CGAAGGGAGATTGCAAGCTCCTCATGCTTACCAGAATGGACATCATGGAAGATCATCTAG
TTTAAGACGAACGCCGAGTCCAAGAAGAAGAGGGCATTACGGAGGTTATCATCACGATAT
CGGGTTCTCCGATACAGTGAGCAACGTCGTCGAGATCGTGAAGCACGAGCATCAGAGACA
CGGCCGATCACATCGACCTTCCCACCATTACTATCCTCATGTTTGGGCTCCGATAGGTGT
AGAGAGGGACCGGGAGCGAGAGAGAGAGTGGCGGGAGTGGCGCGACCGGTCGTGGGAGCG
CGAGGGCGCCAGACGAGGTCGCGGTCGACAGCTCCCGCCCACGCCCACCAAACCGTCCAC
CTTACATGTCAAACAACAACCACCATTCACAAGAATAAGCCACAGTCCTTCGCGCTTATC
ATTAAGGCATACGGTGAGAGAACCCGTGGAACCCTTACATGATGAGTACGAGTACGGCAG
AGAAGTTGAAAGACTGATACACCGAGATTATAGATCTAGAGAAAGACGCGTGCGGACGTA
CGAGGGCGAGGTGGGGAGCCGCCCGTACCAGGCGCCGCTGAGCTACGAGGCGGCGCTGGC
GATGGGTCGCGGCGGGCGCGCGCTGCCGTCGCCGGCGCCGCGGCTGCCCAACGGGTACAA
GCCGCGCGCGCGTCACTCGGACTCGGACGAGGACGACTGGTGCTAGCGTCGCGGGCGCGC
GCGCACTCACACACCCGCGCCGCGCCGCACCACTACCCGATATACACATTACACGAATCA
TGAAAACTATCGTTTGTAACGCTAAACAGTTTACTCGTTCCTTTCTATCTACGGTTAACG
TGAAGTGTGACAACGATGCCGGACGATTCGTTTGCGCTACGACTTTTTACGTAAAATGTT
ATTAGTATCGTAAAATTTCTATGTTACATTTGCACTACGTGAGGGCTATGTTCGTTGCCT
GGTGAAACATCGAGGATCGCGTCTGCGCAAGTGGAATCTCGAGCTGGGAGCGATCGACGA
CTGCTTCACAATTTTGTATCTTATAATTTTGCTAATAAGGTGTTGAATGGTAAGCCAAGG
ATCGGAGATGCAGCGGAATGTACTGGTGCGAGTGCTGCAGCTTTGTTCCGAGTCGTGGTG
ATGACTTCGCTCGATACCATTTCATGTTCAAGTTCGACGTTAAGAGAACATTAGAGATCA
ATCGACAAACAAATTGATACTTGTATTGTATAAATATTTACATAGAAAATAATTTTTACT
TAGTTAATATTGTATTAAATAAATAATTACATTTTTATTGAATTTGCTGTCCTTCCCCAA
AGTGCTTTATACCTACGTTATTTAAATTTAAATACGATTATATTATAATGGCGGAATATA
TTATGTAAATTTAAAATATATCTCTGCATTAAATGATTACCCAATGTTAATTCGTGAATT
GTATTTATTGCTTGTAAGATTTTGTTGCCTGGTGAAATGATTCTCTAATATTCTTAACAA
GTACTAACTTTCTATTTCAACTAACACTACGTAACAATGTTACTCATTCTTTTTTATTGC
TGATGATCTTACTTTGACCTTTATCCTTCAAGAGCTAATGATAAATGTAGGTAGTATTTT
TATATAAACATCTGACCAGATCATCACCAGGCAAAAAAATCTAAATGTTTTTTCGTACAA
ACAACAGAATTGGTTTTCGAATTTATTTAGAAACTAACGAACGTTCTTTGCGTTCATATT
AGATTTGATATGAATTTCAGATTTTTATAAATTATTAATGTAATTTAATGTAAAATTGTA
CAAAACCAATTCTGTCGTTGTTGTACTTATACGATAGTCAAATATAATCCTTGTAACACG
AACAAAACTTACATTTTCATAATAGTGTATCGTTAGTGGACCTCTCTGATGCGACTGTTG
TACTTTAAGGATAGATATAAAAATCGATATAAATATTGTTAATACTAGCTATCAAAAATT
ATTTACCGAATTCTAATATTATTCTGTTATATCCTTTAAATTTATATAAAAATAATCATA
ACCGTTCAATGAATGATGAAGCAATGAAGACAAATTTATGATATTTATTTGAAGAAAATA
TATTTTTAGTATGTAGGCAAATTTAGATTATTCATATTACGCCATTTTTCGTGCTGCTGA
AAAATGTTGCTATTTTAATAGGTATATTTATTTAGAACAATTGACCTATTTAATGCGAGC
AAAAATACCTATTAGTCGAGTTGCAATAGATGTATAAGATTTAATGAATCAAAATGAATG
AACGACATGATATAAAATGTGATTCATTCAGATAAATTAATTCTATTTTGGTAAATATTC
TCAGGACTACGGATAGATGCGATTATCAGTTACAAGAACTTAAACAGTAGAGAATAAAAA
TAAATATTTTAATAATAATTCAATCGTATCATAAAAGGCTCGTGTTATTTGTACTTTAAT
ACAAAAGGACTTTAAATTTTGACAATTTGTAATAATCGAATGCCTTATTTGTGTTAATTT
ATATTCAATGTTAGACTAAGTCGGTGTCTGTGTTTGTTTATTAACTATAGGAACACAAAT
AACGGATACATAGAGGACTCTACCTACCAAACCGTCATTTAAGGAAAAACAAATTATTAT
GCAAATAATAAATTGATTATTTTTTTGTTGGATAGTGTTAAAAGAGAGATAGAATTTATA
TTTCAGATTTTTGTATAAATGAAATAAAAAGAGTCCTTTAAACGTACCGTTAACAATATC
GCTTAAGCAATAACTTGTTAATCATAGATTTATTATTGTTGGATTTGAAATCGTTCTGTT
TTCAAAGTTTAGTGATAGAATATTAGTGTATTTAGCAAAAGAGTACAAAATAAAAAGTAC
AATAGTCGTCGCTGCAGAGTCATCGTTCACCATCAGACACGTCGCGAGGTATGCTGTAGT
ATAACGTACGTCACATTAGTGCGAAAAAAAATTGTAAATACATGATTTTCTGTGATAACA
TGATGAAGTAAGGGACTTTATTATTAGAACTGTGTGATTGCATAGGAAAAATGGTTCATT
TCTCTAAGTCTGTGCACGTTTCTGGGAAACTGTGTGTAAAACTTTTCATTTTTTGATCGA
CTTTTAAGAGATCTTAGCCGAACAGTAAGCGATACTTTTACAGCCAAAGGTTACAAAAAA
AAGTCTTAAAACATCACCAATAACTTTTTAAGTACGTTATACATATAATTTTGACGTCAA
AGTAACTTGATGATATTTTAACAAATGACAAACAGTCCGTTTCCCACTGACGTGCAATAT
TTAAAGTTAGATATTTTAGTGAAAATCTGATATTATTCTCTCATATATTTTGATTGTTGT
TGTTCGTTGCGAAGGGCAGGAACAGGTGTATTCTAGCTTTTCATATTTTACCTCTGTTAG
ATAATAGTTATTAAATACAAAACAAATCGATATGCTGTTCAATCGATTTTTACGTACCGT
CAGTTACCGTTTATACGCCTCTATTTGAATATTATTCGTTACGATGCGATGTCGTCGATA
TGAAATCGTTTTAAATTCTTGATATTATTGATGTTATATTGACAGTGCTACGTAGATTTT
ATCGTTTTGTTAATTACGTTGAAACGTGATCCACAGAAATATATTGATTGTTGCCATCGA
ATTCAGTGTTAGATTTTATTGTATGTAGTTTGTTTGATCGTTTATCGATTCACGAAATAT
ATTTATATTGTTGCCTGTATAGTTTTTGTTATTGTATTCAAGTACTGGTTGTTTGTATTC
AGCCGATGGACTTTCGATGAAATGTACAATGTAATGAGTGCGTCCCGCTTCAGTGTGCGC
GTGTCTCGCGTGTCGACGATGTGTCACCTACGAGTGTGTGCGTGTGTGTGTGTGTAATAT
GTGTAAATAATGTAATATATAAAGCGGTCGTTCGTAGTGACCGCCTGTGAGAATATCTAG
TTATATACTAGTTAATATTAGCTAGGTAAATATCGACCCCAACTGTCCCTTGAATTTAAG
TTGGGAGTTTCACTGCCTTAAATTAATGAAAAAACGTTCATTATAATAGTTATCTAACTA
AAACAGATAAGCGGCATTTGTATGTTACTGTCATTTGATATTCACTTCAGTATAATTAGA
AAATAATAGGTTTTTCATTCGATTATATTTAAATTTTGATGTCGTACATTTTTTATAAAG
ATTTGATAAATGAAACGTAAATTATAAACACGTTTCTATTAAAAATGTTAACAGCAGCAT
AAATGTTTATTACGTACCTATTATTCTTATACAGTCGTTAAATTTAAATTTATAAA
(10256 bp)

- SilkBase 1999-2023 -