SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9834c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003197 P endocardial cushion development
GO:0003290 P atrial septum secundum morphogenesis
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007507 P heart development
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0008584 P male gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0032526 P response to retinoic acid
GO:0042493 P response to xenobiotic stimulus
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045165 P cell fate commitment
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048468 P cell development
GO:0048565 P digestive tract development
GO:0048646 P anatomical structure formation involved in morphogenesis
GO:0060413 P atrial septum morphogenesis
GO:0060575 P intestinal epithelial cell differentiation
GO:0070410 F co-SMAD binding
GO:0090575 C RNA polymerase II transcription regulator complex
Transcript
Level		FPKM:0.86 TPM:0.85
ORF EntryO_TrvaFAMAMG10126_complete:A_TrvaFAMAMG_TR9834c0_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTGAAGAAATAGCTGCTATAATTTATTTGTAAAAAAAT
ATTCTACTCACTACATAGCCAATATATCAGTTAAAACTTTAATAATTTAAGTATCCATCC
CTGCGTAAGTCACAATTATTTATCATCTATACAACAATATCTCTAGTGTTTTTTAACAAT
GAGTATTCCGGCAAAGAATTTTTTTTCACAATCTCATATAGATAATTTATGCTGAAACTT
ACTTTAAAATACATAGAATTATGACAACAACAAATGGTCCATTAAGCTTTCTATAAACTG
GAAAATATTGCTTTTATAACGATATACTACGAATACATCAGGAGACCTTAATATACATAA
TAGAGGTAAAATCTGTCTACGTTTAAATTTTAATTGATTTATTTTTAACGTATAGCTTCA
AATAATTTTGAAGTATTCTAACAGATCGAACTCACAATATCAGATAAGTACATAGCAATA
TATAAAACTATAATGAACGGTAACGGGTCTTATTTACAAAATGAATGAATATTTTAGTGA
TTATTGGTCAAGAAATAGTTCCGGAACAATAGAATATTTTAGAAAGATTATTTTACGGAA
GAAATTCAAAGTTTTGACATCAGCAATCTAACACGAAAAAAACTTATTTAAAGCCATTTC
TTCAATTTTATTGCTACTCATTTATGAAGCAGGTTTTTAATTATTCTTACATCTTAAGTT
ATTATTACAATCATATCTTGATTATATTATGTATTGTGAAATAGGTACAATCAATGAATT
CGTTTTAGAGTTTTCTAAGAATTACATTGCTGATCCACGGTTTGTGATGTTCACGTTATT
ATTATTGGAACCATGCTGGTAATTTCTTAATATTTTATAAAATAATAATTGAATTGTGAG
TTCCATCGTTCAGTTTTTCTATCATATAATTGACACTATATACTATTCAGAATAATTTTC
TTTACATTGCATACAATGCTCATCACCACCTTATCACAATGTTTATTGCTTTTCGGGTAC
ACACACTAACATTACAAACAAAACATCATAATTATCACATTTTAATTAAAACACTTTAAT
TTTTCGAATAATAATCGAATGAAAACGTATGACAATGTATGTTATACAAGAAGACGTGAA
GAGTTAGTGTGTCAGTCTTTAGAGATTCGAAAAAAACAATTTCACAATAATATCATCAAT
GGAATATAACAAGAGTTTGTTATTCCAGCATAAATTATAATAAAAAAATACACTTTTATA
GAATTGGTACTGCGTCTGTACGTGTACGTAGGTACGTACTACTGCGTACTAATGCGTACT
AGTGCGTACGGACAAAACAAACGACAAACACATGCATGCAGTTAGACCGTAAGCGCACAC
AACACAACCCAGCGTTAGTACACTACGTTACGATATACATTGTTCAACTCTTACAACGAC
GAGACAACTTACAACTAAACGTAATAAATAACCGAATTGGAAGATCGCAACATAATATTC
TGGTTCACGGATAAAATAAAATTTTATGTAAAATAATTATTAGAAATTCGAGGCAATTTT
TTGTGGACAAAAACTTAGAAATACGAAAAAGGACGTTCACATTACAACTATGAACATTAA
ATGTAATCCTAAGAAAATATACAAATAAGATTTTAATATTATAAAAAATAATACTGTATT
ATTAGATACTACGCGCGATAAGTTGATAACCTGTTGATTACACAGTTTGAGACATTTGAA
TTTAATTCTAAATTTTTATGTTGAGATTCAAATTTTACATACTTGCACGAAAATAACAAA
ATATACAATTGAATATACCAATTCAAATAAAATCGGATTAATCGACACAATGAAACAGTA
GATCACAATTATCTTACACTTGAGTATTGTTATAGAGAAAACGTGAATAATACTAACATA
AGAAACTAACGCACCTTTATGTAAAAAGTGGTGCTTATCTCAAAATAATATCATAATTGA
AGAGAGCTATAAAATATAATAGAGAGCGCGTTTTAGATACACTATTGATAGACTACCAAA
TTTTATTGTCAAAGAAAAATAAGATCTGACAAAAATAAATAATCTCAATTTTTAAAGCTT
TTGAATACGTTAAGCTTCGATTTGTGAACGGGGGGATAGCTGCAACATAATCACATGAAC
CGAGACAGCGGGTGAGCGTCGCTACAATCTCGTTTCTAGCTAAGTATCACAGAGTCTCAT
AGACTCTTGTATTATACTGGCCCGACGGGGGTTTCGACATCAACTAACACTAAATTAAGT
AGAGACATAAAGGACGGTGACAAAATGAATTCACAGCTGCACGAGCAACGAAATTAAGGA
AAAACGATCGAAAAGTAGAAGACACGTAAATGCGTATTCGTAACATTAAACTGACCACGA
TGAGGTGAACCGGTAGGAAAAACACTATTATAAAAATAATGATCAATGTTCGACCATAAA
ATGCCCAGTAATATTTTAATTTGAGGAAAATAATAACTATTGTTCCATTATTATACATAT
CTTTTAAAGTTCACTATTTAAGCTGTAACCTAATTTTGTCGTACAGTTACACCGTGCGTC
ATTTACCTTTGAAGCAGAAACAATTGTATAAAAGTAGCACGGTATAACTTAGGACAAGTC
CCGTGCACATCGTACACTATAATACCGTTTCTATAATGTAATAATGCCAAAATTAAACTA
TTATTTTGAACTATAAATATATGAGTTTATAAATGTATAGGTTATAAACCGATAAACTGG
AAAATATGCTATGTTACTATTAGAAATATATACTCCTACCGCGGAGCTATCGTTTTCAAG
TAATATTTCAATAAATTTCTATTTATAACATCAATATTATAAAACACTGGCTATTTATAC
TAATTATATAACAATAAATAAAGACGAAATTGCGTCATTTTAATTGTATTCGTTTCGATG
ATTGTATAATATAATAATAATAATACAGAAATTCGACATTATTGCTTCACACAACATCTT
GCCATCTTATCTAAAGAATACTTTGTCAGAAATAACAAAATACTTACGTTGTAAATACTG
ACCGAAATGGGAAATAAATTAGACAACTATAATTTAATGAAAATACCGTTACTCATAGAT
CTAAGCAAAAAATAAAAAAATGTACAATAAATTCTTAACCTAAGGTGAATACTTGCTTCC
TGCAATAGGTAACCGTAAAATAATTTCATCAATATCAAGAGAGCATTATAAGGCAAGGGC
TAACCTATGAGATTTTAAAACGAATTGGCAAATGGATAAACGCGTTCCGATTCAATCGAA
CACTCCATCGTACAGTACTGCGGCATCAACTTAAACACTAAATCTCATTCTCAATCGAGG
GTAATCATAAGTTAACATTAAAAGTTTGTTAATAAATTCTAAACTACAAAATGTAGTATG
TACTACAATACTTTAAACGACGTTATAATTGTACACAACACTTTCATTATTGCTTTACGA
ATTTAGTATCCTTCGCTAACAACTAGCTAAAGGCTAATAAGATATAGGTACGAAAAATAT
AGGACAAGTCGACTTGTCTAATACGTCACCACGATCCTGAACACTACTCCTGCCTTCCCT
CCCCTCCCCACCGCACTCCCACCACTCCCGCACTCCTCACTAGGCACAATCACTTCACTA
ATCGACTCATATTCGTGCATATTGAAGGCAAGAACCATTAAAAGTTTAATTTTCTATTTT
TTAAACACTGGCCTGTTTATCACTATGTAATATTATGAGAAAATGCATCTACTAACGTAA
TGTAATGTGTTCGTGAGACTATTTAATAAAAATGTAATCTAGATGTCATCTACTAAGAAA
AAAGGATTGTTCTATAATAAATTCACTGACCTGCAGAATTTTGTGGTTACTCGTGATATC
GGAATCAAATGCAGACTTTTAAAAAACATTCTCAAGAACACGTAATTCACAAAGATGTTA
ATGCAAAGCATTCTCGTTCGAAATGCAACAGATTAAGGTTCAATTCAGTTTGAGGGTAGA
TTGTAATGGTTGTTGTATCACAGTGCGAAGTCAGCGCGTTTCCTCGGCGGCGGGCACGTG
GCTCGCGACCAAGTTCAACGGCGCTTCATCATATTCTGGAACGTTCGATCCGACCTAAAC
AAAAACAAATTCATTTAATTTGTAAACCCCAAACCGATGATATTTCAAAATCTAATGAGC
ATCGCGAAATGTAAACTTTTTGAGCGTGTCAATAATACAATTCTACTAAAGTGGCACAAG
ACAAACTCGCATGCAAGAATGATTATTAAAAACTTACTGCACTCAATCCTGGCGCGAGTC
AAGATTAGGGAGAAGAGGTAGGTATTAAACAGACAGTACACAACATTAAAGTAACTAGTG
CTCACACATGATACTAATACTATTTATTTATATAACTTACGAAACTTAAAAGGTAGACTT
GACAAAGTACAATGATCCGACTGAAAATAATCTCATCTAATTACTTTACACTTAAATGTC
ATTGTTACGAAAACGTAAAATAACACAAATATTTGGGAAAACGTGATAAAATTAAATATC
AAGGTCTTCTTCAAACAAAGGCGAAGACACAACGTGTAGTGTTGCACTAGGTCATGTCCT
CTGAGGCTACCTACCCGTGTGCGTGTACGTATCTCACGTGATGTGTATGCGTATATCTTG
TATTGTAAGTGTGACTAGTAGCGTGTGTGTGTACAGTCGGTGTAGGTACCTGGTGTCGTG
CGGTGTGCGCGTGCAGTGCTGCGAAGAGATGCGGCTGCAGCTGTCGTCGGAGCGCGGCCA
GCACGGCCTCCTCGCTGCCCTCGCCGCTCGGCGCCGCGCTCTCGCAGCCCTCGCCCGCGC
GCATCGCACTGCCGCTACGACGGGACTTAGTCCTGGCGTGCTTGGAGTCGTGTCGCGGCC
GACGGCGGCGCGTGTGTATGGTGTCGCGGCGCATGGTGGTGGGTCGCGCGACGCCGTGCA
GCTTGAAGTACAGACCGCACGCGTTGCACACCATCTCGCCGCGCGCGTCGCGACGCCAGA
TCGTGGTGGTGTGCGTGCCGCAGTTGCTGCACGATAGTTCTACGCGAGCCGAGCCGCGGT
TGCCGCCTCCTCCACCTTCTGAACCTTCTTGGTTATCTGAAGCAGATTGCGGCCAGGAGG
AGTTATTGGTTGACTGATCTTGCGTCACTGGTTGCGCTCTCGCTGGGAAGCTCTGTTTTC
TCCGCGCTGTACCCGCTACATTTGCACCACGTCCTGACGCTGGCCATTCCCCATTCGGTG
AAACGGATCCGTTGAGCGGTTGTTGTAGCGCGGGCGCTGTGGGCGAGGTGGGCGGTCGGA
GCGGCGACACCGTCATGCCGAGGTGCTTGCTGTTAATCAGCCGTCGTAGTAGCTGCGTCG
CTTCACCGCTACGACCGTTTTGTCTGTGTAACGCCTGCCAGAGCGACTCTTTGTCTTGTT
CGCCGTCGAGCGGGGGCTGCGGGGAGGACTGCGTGGAGCGCGCCGACTGCGTCTCCTCAG
GGTCATCCTGCGACATCTGAGATATGTCCATTTGTAATCTGTCAGGATCTGATCCGCTGC
TGCTTTGACTACATTCCTCGTAGACCGTGGCCACGTCTTTAGTTAGCTTTATTTTGTTAA
CGGTGTGATCGTAAATATGTTGTTTGTATTCGTCCACAAAAGTGGTCGCTTTGCTCTGTG
ATATTGTTTTCGGAAAATATGAACGTTGAAGATCGACGATGGGTTCTACCTTGTCTGTTT
CATTTCTAACTGAACTATAATGTGACAAGTCTATTTCTTTATGTTCCCGGTCTTCAATGC
TGCAAGGACTCGTCGCATTCTGAGTTGTGTTGTATGTGTTGTAGTGTTCATCTGTATAAT
CACGATTGTATGTGATGTCTCTGGCGTTTGTTGCTAACGTTCTATCGAGTATATCCGGAT
GTTCAGTTTTAATTTTTTGAGATTCTTCGTTTTCGCGCTGTGCGACCTCCACAGCCTTGT
TTATAATATCAATAACAGCATTACAATGCATTACTTCACTTGCTCTCTCGGAAGGTGGTA
AACTTGGCACGCTGTTAAATGTGATACGAGGTTCGTCCTCTGTTTTGACAACATATTTGG
AAGGATCATAATTTTTTATTTGTAAAAGTGTAACTGCCGCCTGCCGACTTTCTAAATTCT
TCATCTCCTCGGTAGAGTCTGGAGAGCCAATTTCGGCATATTTATGTTTCGTCTCGTGCT
CGTATTCATTATCGTTCAATGGCTTGATTATCTCTTCTAGTTTGGCTGCCGTAATGCTGA
GTATTTCCTCTTTTGGACCTGATAAAGAAAATGCATACTGTAAGAACTGTTCTAGTAATC
TTTCAGATTTATGTGACAGTTCTCTGAATGTATGAAACTCATCCAGTTTTTGTGCACAGC
TTCCGCACACTACCTGTGGTAGCAGATCATCCGGAGAAACCATCAAGGATAAGTCCGTCG
TTATCATCTCCCATAGTCGTGATTTATCCTTATCACGATCAAATATTGAGAGTTTAACAT
CACTGCAATTATCGCCACAAAATGATAAACAAAGACGACACACTGAATGGTACTTCGGCG
GCAAATTACACATATTTAGAACTTAATAATTCGAAAATAGGTCACAACGTAAGAAAACAT
TTAGAAACTAATCGTAAAATTAATTATAACTAAAAGGTTTTGTTTAAAATTTAACTCAGC
ATGCGATGATGTAGAATACATTACATCGCGATTGTCAACCAAACGAACGAGCAAGCTACA
CACACATCGAAAGTCTCTATTGTTTGTACAACGATGAACACAAAACCATGTTGAATTCTA
TTGGTATGTTTTCGTTGTCCATGTGATAAAATGATAACATTATCAAAACGAGAATACTGT
GATTTTAATGACTATTAGCATATAAATA
(6928 bp)

- SilkBase 1999-2023 -