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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR9825c1_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:9.24 TPM:9.05
ORF EntryO_TrvaFAMAMG10033_3prime_partial:A_TrvaFAMAMG_TR9825c1_g3_i1
Sequence
(Nucleotide)
CCACTACGCCCAACATTAAGGACCAGTTGGAAAACAATTGAAGAACGTCAATGACAGTCA
CAAATCCCTATTGGCCACTGCTCTACAGATTGAAAGACGTCTTAGAGAAGGGTTGGCCAA
ATTTAAAGAGTATGAAGATACTTTGGAGAGTATTTTGAACAACTTGGACGAATGTGAGCC
CGCCATTACGGAATTGGATGTGCCAGTTGATGGATTGTCTCACGGAAGGGAATTGCTTGA
TAAAGCTAGGACACTCCACAATCGTCTTCAAACGGAGAAGAGTCGCCTATCAGCTGCAGT
GGCTGCTTGCTCTGCCGCCGCCGCCTCCGTCTCCCGCCCCTCGTCCCCCGCAGACACCGC
CCCCCTCCCCATCCCCCCGCGGGAACTCCATGTCAGGGCCCGTTTGGAAGACCTCATCGA
TCAGGTCCAAAGCCATTTGGAAACCCTTGGAGATGCTGTCCATGGTATGGAGGAAGCTAT
GAAGCAGGTCTTAGAGATCCAAGAATGGATAAACGTTCACAACGCTCTGGCACGTGACTG
GCTTGCCAATCCCTCGAAGCTGAGACCCGAAGCTGCCAAACAAGACATGGCAGCCATGAG
CGATGCCTTAGTCTCTCTGGGCGAAAAGAGAAACAGACTGCTGACAGAAATTCCTACTGA
AGGTCTGGAAGACGAAATCAATTTAGAAGAGGAATTAGATAATCTAGAAGAAGCAATAGC
TAAAGCCATTGAACGTGAAAAGGCGAACCAAGGCACCATCGATGATTTCCGTCACAAATG
TCAAGAAATTCACGACTGGTTTGATGCAGTTCTGAAGAAGATGTGCTTAGCTGACAAAGG
GTCTGGTCTACCTTGCCCACAGAAATTAGTTGCTCTTAATGAGCTGTCTGCAGAGTTTGG
ACAAGCTGGGAAAGAGAAGGTGGACAATATTAAAGCTGTTGGTACCCTTGTCATCAATAT
CGTCAGCAATCTTGAATCACAACAAGTTGAAGAACAGATGAAGTCAGTAGAACGTCGCTA
CAACGACATCGCCAAACGCATCCAACGTAAACTTCAAATGCTAGAAATAACACACAAAGC
CATCGACGGTACCAAGAAAGAAGTCGCTGCCCAAAACGAATGGCTCCAGAAGGAAATTGA
TAACCTCCTTCACCCAGAACCTTTAGGTTACGAAAGTAAATCTGTCAAAGAAAGACAAAA
GAAGATAGCCAATCTTCTTAAAGAGACTGATGGCAAGAAAACTGTCATCGACTCTCTGGA
GAAGAAGGTCAGCAACATCCAGGCTGAACTAGAACCTTCAGAACAGATGCAATTAGAATC
TGAACTATCGGAGCTATCTTCAAAACAAAAACAACTTGCGACCCTAATCAAACAAGAAAT
CGAAAGATTAGGAACATGTGGTGAAGACAGGAAGAAACTTGAGAACGACATCGAAAAGGC
TAAGAACTGGCTGAAGTCCAAACTCGCTGAAATTAAGAAGCTTGGTGGACCAGTTCCACT
TGAAGCAGCTAAAGTCGAGAAAGAAATAGCTGTTCACAAGAAACACCAGAGCGAACTATC
TGACTTCCACAACGAAACTTTAGCTGAAGTCATGAGACAAGGCAACGCTGTCTCCAAAGA
TTGTTCGCCCGAAGACCGCGCTAAACTACAAGCCATCTTAGAAGACCTGAACAAGTCCTA
CACTTCAGCTAAAGTAGATATCGACGACAAGCTTGGAGCGTTAACCAAACTGCTCCAAGG
AAGGAATGAGTTTGAATCTGAAGTCGCTAAATGCCAGCGCTGGTTGAACGAAGCAGAGGT
TGCTGCTACGCCCGAATTAAGAACATCGAACTTACAACTTCTGGAAGAACAACTGGCCAA
ATTCGAAAAACTTAGCAAAGAAGCTGAAGACATCGAGAAAGTTATAAACAAGATCAAAGA
TAAATCTAAAGACATCGCCGAGTCTCTTTCTGATTCAAACAAGTTGCAGCTAAAAGAACA
AGTCAATGTACTCTCGGACAAGTTTGCGAGAATCAACGCCATCATCAACGACAAGAAGAA
TATCCTTCTTAAACACATCAAGGAGTACAAGGACGCTGCTGCCAAGATCGCTGCGGCTTT
GGAGTTCTTGAATGAAATCCAAAACAAACTCAAGGCTTTGAACAAACCTATCGGAAGCAA
GGTCGAAGATGTACTGCCAATCATACAGGCTTACGAATCCATCTTGGCAGACCTTAAGAA
GAACAAATCAATGCTGAATGAGTTACAAGGCGGTAACCTTCACGATTTACAAGACATTCT
TACCAAACAAGATGAACTAGTGAGCACAATTGAAGATCAAATATCGAGACTCAAACAGCT
CATGTTATTGCGGGAACAATTCTTTGCTCTCATCAAGGAAATCGAAGAGTTTATCTCTAA
ATACACCGATCTTACTTCAGATATCGAAAAGTCTAATGACTCTCTCGAGGACAAGATCAA
ACGCTACGATGACATCATTGTTAAAATCCAAGGTTGTGAAGCTTTGCTAGCTACGGCTAC
AGATAAGGGTCAGCAAATAGCTGCTGAAGGTACTGTCATCGATAGAAACAACATCACTGA
GCTTCTTCAGTCCCTTAAACAGCAACTATTGACTTTGAGGAGGACTGTTGAATCAAAGAG
ACAAGAGCATGAGAGGGCAGCTGCAGAACACAAGAAATTGGCTTCAGATTTGTCTGAAAT
CCTACAATCGCTCCATGATAATGAATCAGCTGTACATTCTCGTCCACTTCTGAACAGAGA
TGTGGCGAGCGTTGACAAAAAACTGATAGAACACGCCACTCTTGTCAAGAACATACAATC
CAATCTAGACAAGTTCACTAAAATCGCTGATTCTGTCAAGAACGATGACGGAATACCTGG
TGCCTTACTCGAAATGATATCCGACGGTAATTCTTTAAAGACATCGCTACCTGCTGAACT
CGCCAACCGCGAGAAATACTTGCAAGACAACAAGAAGTACAGACAACAATACTTGCAATT
GGTAGAAAAATTGAACATCTGGGTGAACGAAGCCAACATTCGCCTGAACATGGGCAAGAA
TGGAACGGACTTCGAGAACATTGAAGCTGATCTGGAAGAGCATAAATCATTCTTCCACTC
CTCCGAGCCAGAGATGAAGGATTTGGTCGGAAAGCGTATGCAGGACATAGTTGACAAGAT
CTGGGCATCTCTAGCGGCTTCAGAACAAGAAGAGCTGTCCAAAGACCACCAGAAACACAA
CCAGCTTCTGAAAAACACTTTGAACTCGGCCAAATCTCGCCAAGCACAGTTGGAACAAGA
CCTGGATATTTGGAAAGACTTTTGCCAACTCATGGAGAAGATTAAGGCGATTTTGGAGAA
GAACAACATCAAGGATGAACCCATTACTACGGTTGACGCGCTCAGACTCCACCTCGAGAA
GCTGAATCACGCTAAAAACGACCTAGAGAATCAGCAGCCGCTCCTGGACGTGATCCGGGA
GCGAGCTCGGGAACTCTGCTCTGG
(3504 bp)

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