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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR48c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_II_transcription_factor_B_subunit_2_[Papilio_xuthus]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:4.53 TPM:4.44
ORF EntryO_TrvaFAMAMG134_complete:A_TrvaFAMAMG_TR48c0_g1_i1
Sequence
(Nucleotide)
TGTCGGTGCAGTGTCGGTACAGTAACATGGACCAGGCAACAAGAATAATCAAAAATAACA
AGTCTTACACCTAATTAAAAACTATGAATTCAAATACTGAAAAATATCACATACCTTTCT
CTGGTAGACGAGTCCAAACTCTCTGAGATGTTGCAAGAACACAAGCATGTTATTACTCAT
GCCTTCTGTACTGTAATCCTTTCCCAGCGTACTGAAGCTGAGTTGATATAGGAAGGCCAG
ACACTCGGCTGCGCTGAGGCTTCGTTTCTCTGCTGTGTGCAGGTAATGTTGAAGGAATAA
CCACACCTGTTTAGGAGTACTTAGTAGTAGGAACTGGAAGCCCGCACGAGTTATAACTGC
TGAACCATCTTCTGCATCTCTGGTCATCAAGCCAGCATGCAGCAATATCCTGACAGCATC
AGCGCTGATCCCCTCGGTCTGTGCGCTGCCCACCATGTAGTGCAGCACACACTCCCAGCG
CTCCAGGGCATACGCGTCTAGGAACGCCACGTCACGAGCCTTGCCGTCTGGCTCTAGGGA
CGAGGACATGCTCCATGGACGACCACCTCCCAGTAAAGCCACTTTCAGGTTCTTCTTAAA
GGACTGAGATAGCATCCAGCCCGGCATTCCACCAGGTATGGGAGCCTCCTGCCACACCGA
TAGCTCTGATAATGCTGTGCATGCTTTGGCTTGCTCTTTGGCATATGTCTGTGAGACCCA
GGATGTCACGACGGCCTGTGGTACGGGCTGCTCCACAAACAGCAGACGGATCACAAAGTG
ACGGGCTAACTCTGGTAGTTCCCGGTATATTGCGAGGCATATCGTTGGATAATTGTACAG
AGTCTCCAAAAATTGAGGAGATCTAGACTTCAGGTACTCGTGAAGATCTTTACAGTGTAA
TGTCGGTGATGGATTCAAATGTAAAGACTTGGATTTAGATGATTCTGACATGTTTTATGA
TTTTATTAATTGACTGATTGCAAAATATTATACGTCACAAGTAATTACTAATTACAATTT
TTTTTCATTTCTCAGCATCACGAAACAAAACATTTCGTAAACAACAGCGACTGA
(1074 bp)

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