SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR45c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_F-box_only_protein_11_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.03 TPM:3.95
ORF EntryO_TrvaFAMAMG123_complete:A_TrvaFAMAMG_TR45c0_g2_i1
Sequence
(Nucleotide)
ATGATTTTCGATTTTTCTTTTTTTGTTTACTAATATATAATTTCGAGAATACTATACTAT
ACGGACACAATCGTGAAACCACTATAGAAACATCAAAGCTATTTATAAATGATATACAGA
CACAACCTGTAGGTACCGTTCAGTGGACATACCTTTCTGTGTTCAGTATAGTTTTAGGTA
ATAAAAACGGTAGTGCGTGTGCTTGTGTGTGTGCGTGTGTGTATGTGTGTGTGTGTGATC
AGTTGACCATGAGCGTGTGCGACTCCATGGGCGCGGCGGAGTCGTACAGTGTGTCGGTGT
CCTGCGTGGGCTCGCCCTGCAGCTGGCACTGGTTGGACAGCGTGCCTGCGCCGCAATCAC
AGAAGAACCTATCATGACGTATAAACTCGACATCATGACCGGAATGGCACGTTTTGATGC
AGTTCACGCAGATTGCGTTACGGTCTGTCGTATTGCAAGTCTGACACCTATAGAAATCAT
GCATCGGAAAGGAAGTGTAGGAAGAGATTTTGTAAAGACACTGTCCACCGCCGACAGCTT
TTTCGACAGCGTCTTGATTGTTGTATATTTTGTTGCCCCGAATTAATGGTGTCACTCCAG
AGGCTAGGCAAAGACCTCCGAATCGATTATTAAATATCTGATTATGTTCTAGCGTGGCGG
TCGCGTTGTTCGTGATCTCGACGCCGGCCGCCAGCCCGTCAAAGATTCTGTTCCGACGTA
ATACTGGATGGCTCTGCGTTGAGATCAGCACGCCTGCTTGCGCGTTGTGAAATATGTCAT
TCTCTTCCAATAAACCCTTCCCACCATTAAAAATACAAATGCCCCCGTCGCGTCCATCGA
ATATTTTATTTCTCTTGAGCGTTGGGTTTGAGTCAGTCTTAATCCACACTCCGGCCATTG
CATTATCAAATATTTCATTTTGCTCCAACAGCCCGAGACCTCCATTGTACACCAGTACGC
CGCCATTTTGTCCTCCCCAAATCTTGTTCCCCCTAATAACGGGATTGCTGCCTGTCCTTA
TTTGGACTCCGGAGTATAAATGATTAAATATATCATTATCCTCCAGCTTTCCGTGACCAT
TATCGTAGAAGTACACGCCAACCTGTTTCCCCGAATGTATACGGTTGCGCCTGAGCACGG
GCGTAGATCCCGTGGTTATCCAGACCCCGGCGAGCGTGTTGGCGTACACCTCGTTCTCTT
CAATGAGACCCTGGCCCTTCTCATGCACGTATATACCTCCATGCTGTCCGTGATGAATTT
TATTATGTCTAACGATTGGATCACTGTTTGTGCGTATCTGTATACCAGCAAGAGCATTTC
CATAAATATTGTTATGTTCAATGAGACCTCGCCCTTCGCCGAATATGTAGACGCCTCCTT
GATGTCCATTATAAATTTCATTACGTCGTATGGTGGGATTGCTGTTGGAAGTAATCCATA
CGCCAGCAAAGTTATTAGAGTGTATCTTATTATCAATAAACTGTCCTAAGCCGGATTCGT
GCACGTAGATACCGCCCGTCTGTCCGTGGTGGATCTCACAGTGCACTACGGTGGGGTTGG
CTCCTGCCTTCACTTCGAAACCTGCGATCCTGTTGTTGTGAATGTCGTTCGCTTCAAAAT
AACCCAGTCCATTTTCAAAGGTGAATATACCGACGTCTCGTCCATGATGTATGTGGTTGC
GGCGCATGATCGGATTAGCGAAGTTCTTGACCCATATCCCGGCGAGCGCGTTCCGTGAGA
TCTCATTGTCCTGGTAGGCTCCCTGAGCGTAATCCGTGACGTAGAGACCGACGTTCTCGC
AGTCGCTGATATCGCAATGCTTAATCACGGGATTGGCTCCTGCACCACTCACGCATACTG
CTGCGCCCACGACACTAGCACTCCTGATGATGCAGTGGTCTATAGTAGGCGAGCAGTTAT
CAGAGACTTCAAGGCAGAAGTGTTTGTGATGTTGCATAGTACTCGTGGCATCGGGTGAGA
ACTTTAACGTCATGTGTCCCGCGTAGGCGCGCGTCGCTCCCTCGGCGAACGTTAACGTCG
ATTCGGCTTCGCGCTCTAGCACTACGGACTCTGCTACGTTGCCTGTCGCACAACCAATAA
GTTGCACATCAGAGTCAATAGCCAAACACTCTTCCTGATACAATCCGGCGTGAACAAATA
CTAGCGCGGGCTGGTGCGTGGGCTGCGGCCGGCGACAAGTGCACGCGCCGGTCGGGTTGC
ACGAGCACACCGTACTGGCGCCAGTACTGGCACTCGCACTACTACTGGAACTGCTCGTCG
TGGCACCAGTCGTAGTGGGACTGGTCGTCACGCCGCTGCCTGTCCGCTCCTCCACGTATT
CTAGAGCAGTCCTAATTGTATTGAAATGCTTGATACGCGAGTCCTTCTTAAAGCGGTAGT
TGGGGCGAACGTGTATGCCGTAGTATAGTTGTCGGAAGCTTTCCTTCCACGGGTTGTCGG
CGTCGCACTCGTCCGGCGCCACGAATTCAAATTGACACGGCGCTGGGTGCATCAGCGGAG
TGTCGTATTCAAACACAGACTGATATAAACTTTTCCATAATTCAGTATCATTGGCGATTG
TGTTAAATCTCTTGCAGACTTGTGAGACTCGGCATAAGTCTCGTTCAGTCAAGTAAGAGA
GGATGCAGAGCAACACCTCATCAGGCAGCTCATATTGCAGGTACTGTGATACATTGCACA
CGTCCACACCTTGAGACAACGATGTTCTCGGTCTCTTTCTGGCGGGCAGTGAGCAAGCGC
CCGAGGGTCCTGGCTCGTGGTACGCTGGAGGCGACTTCCGGCGCAAGTCGTAGGGGCTGT
GATGGCCGGCGGTGGTGGCGGGTGCGGCGGCGGGCACAGGAGGAGCTCCGCCCCCGCCGC
TTGGCCCAGCGCACGCAGCCGTCGCCGCCATAGCGCTGCCCGTCACGTTGTTGGGTATCG
GTACTGACTCACATGGCTCACCTTTTTTATTAGTTTTGGTCTTCCTTCCTTTCCTTCTTG
TACTTTTGTTCCGTGCTTTCGGCATTTTTTATGCCTTTGTCAATATTTAATGTGTAATTT
AAAATTTATATAAGAGATTACATCGAAAACCATTTTTTGCTGTTGGACTATGAGTTTTTT
GGTGTATCATTACGGCTTGCCATCGATTGTGTCCTAGAAGGTAGTGGTATTCGATGACCG
CCTTTTCTTCGCGATCTACGTACGTAAGAACGCGAAGACGAAAACGAGGCACTAGGCATT
ATTTCTTTTATCACTTAATTTCACTAAAATTCAGGTCTAAACAAAGGAGACACCCGCACC
AACACCGTCGGCCATTTTCTGTTTAGATTAGATCGAGTAGACGAAACGGGAAACGAAGAA
TTTGCACCATTAGCAGAACTAGGGATATGCAAAAAACGGTTTTCAGAATAAACCAGTAAA
CACTACAATAAAATTTATAATATAATTGTATTTATATTCATTATTTTGTTATTTTTCTCT
ATAATTTCACAGCACCCTCGAGCAACGGGCCGACTCTCAGCA
(3522 bp)

- SilkBase 1999-2023 -