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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3890c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
Ontology
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0019233 P sensory perception of pain
GO:0019730 P antimicrobial humoral response
GO:0043066 P negative regulation of apoptotic process
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051298 P centrosome duplication
Transcript
Level		FPKM:14.72 TPM:14.42
ORF EntryO_TrvaFAMAMG2904_5prime_partial:A_TrvaFAMAMG_TR3890c0_g1_i2
Sequence
(Nucleotide)
TTTTTTTTATTTTGACAACGGTTTATTTGCCTAGAACTTACCGCATATATCCTGCTTTAA
ATCATATATTCGAGACAAAGTCTTCAATATAATAATTTACTTATATAAATATACACATTA
CCCAAATAAACTTAGTAAAAAGAATTGCTAGAAAAACAGGTGGTATTAAAAACACCAGTG
GATACAGTGCATCAATATATGATATTTAATTTTCATGTACAAGCAAATTTATTAATACAC
GTATAGTCGATGTTCCGCCTCGTTCAGCCAACGTTTATCATTCACGCTATATATCGTATA
ATAATGTCGTAACAAAGTGTAAAGATGGCTTCGAGACAGAGCCCGGTCAAGGCAACGCAA
AACACTTGAGGCAATTCGGAATCAAATTCCAAGCTACCTACTATTACATTTGTCACGCGT
ATATATATCTACATGAGAGGACTATAACATAACTATAATTTGTCTAAATGTATGCCCGCG
GTGCGCGAGCGGCAGTCACAAATAAAACTACATGCGGCTCCCCTCACGAGTTTCATTATA
ATGAATCGTTTAATGCTCACTTCAGTCGATCGTTACAGTACAAGTAGGTCATCTCGATAG
GACATTTTCTCTATTATGTATATAGATAATCTGTATAATATAATGTTTGTCACTAATATC
TACACCGTTTCCAAGGTTACGAGTACAGAGTATATCCCGTTCGGTCGGTGGAACGCGCGG
TCGGCGCTCCGGAGTCCAATGTAAGGCAGTAGTCGTCATAGCCGAGTGCGCAGCGCTGGA
CGCTTAGTGAGTCCACTTGCTCCAGGTCTGCTGTTTGTCGTGGTGGTGGTGCGGGGCGGG
GTCCCAGTGGTGCGGCGGGTCGGGCGCGGGCGTGACGGGCGGCGCCAGGTAGTGCAGCGG
CAACAGGGAGAGTCCCCCGGCGCCGTAGGACGCGCCGTCCAGCGTGCCGACGCCGCTAAC
TCCGCCCACGCCGCTCATGCCGCCCATACCGGATACACCCTGGTACCGGTCGTGTTCCTG
GTGGTGGTGCTGCGCGTGCTGCATGTTGGCGTGCGGCCAGTCCTCGGCGGCGGTGAGCTT
CCAGGCGCGCTCGGTGCCGATGGGCCGCAGCTTGCGCTCCTCCTCCTCCGCGCCCCAGCC
CGACCCCACCGCGCCCACCGCCCCCACGCCGCGCTCTAGGAGCGATTGATAAGCAAGATG
AGATTGGTGGTTTGGTTTCGGTGACTGTGAAACCGGTTGTTGGTACATCAGTAGGTTGCT
CAGGTTGCTGCCGCCACCAAATAATTGCTGTGCGTTATGTTTGTTGTGTATGAGCGTGTG
CCTCTGCGCGAAGTCCGGCGCGCGCGGGTTGAGTCGCGACACGCCCTCCACGCCGTAGCC
GAGCCCGAGCGACGAGCTCGACATGGTACCTCCGCTCATGCTCACTCCGCTCATGTTGAC
GCCGCTCGACATTGACACCATGATATTGTTCCGTGGTGTATTGTCCTGGTAGGCGGGTCG
TGCGTGATGATGCGCATGATGGTCGGCGTGGTAGGGCGCGTAGGCCGGCGGCGGCGTGGA
GCCGTGCGACGACGTGCGCGAACACGGCGAGCAGCCGCCGCCCGCCGCCGTGGTACCGCC
GGCACCTCCGCCTGCACCGCCGCGGTAACCCGGCGCTTTACTTGCATCCACCTGTGGCGT
GGGCGGTTCGACGTTGTGTTCGGGCGGCGCGGACCAGAGCGGAGCGCCGCTCGACACGTC
CTTGAACAGAGAGTACTCCGGCGCACTGCCGCCGCTGCCGCTCGACACCACGCCGCACTG
TGCTGTAGTGTTAATGTGCAGTGCAGTTGTTGAAGTTGATGTATTGACGGTGGCGTCTTC
ATTTGTATTCCAAGAACTGGTTGGTTCTGGACTGAGCTGCACAGTTCTGTCGGGCAGCCT
CGTTTGTTTATTATCGACGTCATCAGGCTTGGAGACGGGTGTGGGCGGCGCGGGGGACGG
CGAGCTCTCTCGTGCGTTCTTGAGTGGAGACACCGCCGCCGGACTGGGCACGCTTGGAGG
TGGTTGCGGCGGCGCGGGTCTCGGTTTAGGTTCAGGCGCCACGGGCGTGGGTGCGGGCGC
GGTGCTGGCGGTGAGCTTGGCCGCGAAGGTGTTCCTGGCGCCGACGATGGCGCCGGTGTA
GGAGAGCGCGCCGCTCGGCTTGCTGGCCGGACTCACGGCGCTCACACCGATGCTCGACGC
GGGACGCTTTTCAACTGTTGTTGTTGCGTGTGTAGTGGCGGGCGTGTGTCGTGCGGGTAC
GCGTGCGGGCGTGCTGCGAGCGGGCGCCGCGCGGACACTCACCGCAGCACTCGCTCCGGC
ACCGCTCGGTACGCTACTAGCACTCGTGGTGGGCTTAGTAGGTGTTTGTTTGACGGGTTT
AGCGGGGTGCGCGACGGGCGCGGGCTTGGCGCGCGGCAGGAGCGCTCCGAGGTCGGCCTC
GGGGTCGCGGATCATGGCGGCGATCAACACGCCGGCCTGCTTCGTTGCTTCCGCTGAACC
CTTGATAGTAATAATCCTCTCTCCCTGTCCCTTGCTCTGCTTGTCGACCTCGATGTGCGC
GCCGGTCACGGACCGTATCGCGTTGATGTTGCTCCCCGCGCGCCCGATCACACGGGATAT
GGCGTGGGATGCCACTGATACTTTCTTACACCCAGGTTCAACAGTAGATACAGTCTGCAC
GCTGGACTTCCGGACGACTTCCTTCCAACCTTCATCGCGCCGTCCGCCGACGCACGCTGC
CTTGGGAGAAGTACTCTTGGCTTCCATCTCCCATTGCTGTGTGTTGGTGGTCTTTTTATT
TTTGTCGGTTGTTTCATTATCATCCAAATTGAGCCGGCTAGATTCGAACACCTGACTCTT
TCTGTTATTTCCGTATTTGTTAACATTTGCTACTGTTATGCTCTTGGGGCTTTCCTCTTC
AGTTTTTTTCTCTTTTCTCTCAGTGAGTCGTCTCTCTGCTGCTTTGGGTGTGGGAGGCGA
GGAGGGAGCTACATTCTCTTTCTCCTTCTTGTCGGGTTTGGGAGTCGGTTCACGTTCTGG
TTTTGGCTCAGTTTTGGGCTTGGCTTTATCGGGTTGTTTCTTAGCGGCGACGGGGGGCGG
TGGAGAGGAAGCCTTCTCTTCTTTCTTCTTCTTCTTAGTCTTAGCGGGCTGCACGGGAGG
AGCTTTCACGTCGGAAGACGAACACGACCCCTGTGAATTGGCATCGATGCCGGAGTCACC
CTCTTCCTTGGCGACGGGTTCGTCGTCTCCCTCGCCTCCCTCCGAACATTCGCCGAGCGC
TTTGTCGCTGCACTCGGAGTTCTTGTCGGGTTCCGCTTGCATTTTACGACGTTCCTCCTT
CTTCTCCATCTTCTTCTTCTTCTTCCTCTCCCGCCTGCGCGCGGCGGCCTGCCTGCGACA
CAGCTCGCGCTCGCGCTCGGCGTCGAGCTCCTCGAGCAGGATGGTGGCGTTCTTGTTGGC
GCGCGCGGCCTGCGTCTCCTTGGCGGCTCGGATCACGCGCACGCACTCCTGGCACTTCTC
CAGGAGCTCCTTGTCTGAGATCGTGCATATGTACCTTGTCATTTCTTGATCTGAAGGGAA
CTGCGTGACGACATCGACCATCCATTTGACCACTTTGATGTGACCTTTACGGAAGGCGGC
CATCAGGCACGAAACCTTTCTATTGTCTTGTGAGTCGATGTCTGCTTCAGCTGCGTACAA
CATTTGTACAACGGCAAGGTGTCCGCCATTAGCAGCTAACCATAGAGGGGAGTTTCCTTT
CTTGTTTTTAACTTCGACAGCCGCTCGCCTCTGCAGCAGCAGCTCGACGAACTTGGTGTG
TCCCTTGTCGGCGGCGATGGTGAGCGCCGTGTCGCGCGAGGAGGGCACGGGCGGCGCGTT
GACGTCGGCTCCCTTGTCGAGCAGCACGCGGCCCACCTCCACGTAGCCGCCGCTGGCCGC
CTCCATGAGCGGGGTGAGCCCGGTCTTGGCGCGGTGTTCCACGTTCGCTTTGCGGTCCAG
TAGCAGGCTTACGACTTCGTGACGACCTTGGAAGCAGGCGAGCGTGAGCGCGGTGTTCCT
GTTGGTCTCGATCTGCGCGTTGATGTCGGAGCCGCAGTCGAGCAGCAGTCTGACGGCCGC
CGTGTGTCCGTTCATGGCGGCCAACATTAGCGGCGATATGCCCAGTTTCGAGCCGGTGCG
GGAGTTGATTTCCGCCTGGTGCGTAAGTAACAGTCTGATGATATTGACGTAGCCTCCAGA
GGCGGCCAGGGACAAGGGCGTGTAGTCGGACACATTCCTGTGTTCCTTGTTGGCGCCGTG
GCTGAGTATGAGTTCGACGACCTCGTACCGGCCGCCGCTGCACGCCAGGGAGAGGGGCGT
GTCCTTCGTCCGCTCGGACTGAGCTTCGATGTCTGCGCCGTGGTTTAGAAGGATTTCAAC
TATCTTCTCGTGGCCCGCTGTTGCGGCCAGGATTAGGGGAGTGAAGCCCTTCTTGTCTCT
ATGTTCGATGTCGGCGCCGCGCGAGAGCAGCAGCTCGACGAGGTCCTCGTGTCCGCCGGC
GCAGGCGAGCGTGAGCGCCGTGTCGTGGTTGGAGTCGGTCTCGCCGTCCACGTCCATGGC
GCAGTAGGCGGCGGGCGCGGGGGCCGCGGGTGCCGCCGCCTCCGCCGCGCGCGCTCGCCC
CGTCCCGCTCGCACCGCTGCCGCGACTCTTTACCTTTTTCTTGGTGGTGGGGTTGGCGTG
GTGGTGGTCTCGCTTGGCGTGTTGCGGCGGGGGTTGCTGCGGGTGTCGCGGCTGTCCTTC
CGTCAGAGGGGGGGTGTACGACGTCGATCTATAGTCGTCGTAGGGCAGGGTGGGCGGCGG
CAAAGCGAACTGCTGCTGTACCTCGGCGGTCGGCTGCGGCTCCTCCTCGCCTCCCACTCG
GTACTGACAACCGTTGTTCGCTTGTTGCTGCGGTAGTTCAACATGGTGATGATGATGATG
CCTGGCGGTGTAGTCTGTAGCGAGCGCCTGTTCTGCGGCGGCCAGTAGTCGTCGCGCGTG
TCGCTCCTCGCCCTCCAACCACTCGCTCTCAAGCTCGCCGCACTTGCCCGACAGAATCTC
TTGGGACTTCTGTTGCATTACCTGCAGCACAAGCGTCCTGAGTTCATTGGGCGGCAGCGC
GACGAGCGAGGGTACCTCCCGCTGCAGGTAGGCGAGCACAGCGCCCAGCTCCCGTGGCTC
CGCTGTGGAGGACGCCGCGCCCCCTCCCGCCGCAGCACCGCCCCCCGCTGTCGCCGCCGC
CGGTGACGTCACGCAACAACCGCTGCCGCATTCTTCGGCGCTTTGTTGTGTTCCGTAACC
CTCAGGCCTCTGCAGTTCTTGTGGAAATTGTTGGTGCTTTTGTAGTTGCTGCTGTTGTTG
TTGCAGTTGCTGCATGTGTTGCTGTTGGAGTTGCTGCTGCTGCAATTGTTGCTGCTGCTG
TAACTGTTGTTGTTGCTGTAACTGTTGTTGCTGCTGTAATTGTTGCTGTTGCTGAAGTTG
CTGTTGCTGCTGCAGCTGTTGTTGTTGCTGAAGTTGCTGTTGTTGTTGGAGCTTCTTTTG
TTGTTGCTGTAACGCTTGTTCTTGCGCTGCTAGTTGCTGTTGGTATTGTTGTTGCTGCAA
CTCGTGAAGTTGCTGCTGATTAAGGTTGGTCGGTATTGGTTGCACTGGGAACAGTTGTTG
CGGAGGCGGATACGGCGGAGTAGCCGGCGAATGACTTGTTGTCACACCTTGCGCGCAGAA
CTGCAGGTCGAGCGCGTGCAGCGCCGAGGTGGCCAACGTCGGGGGACCGGAAGGATCGTT
TATTTCGAGCGAGAGCCCTCTCTCGGTTTCCGGTTGTGTTTCGTTGCGCTGTTGCGTTGC
TAACGCTTCAGCTCTGTGTTCGTCGTGTATGTCAGGCGGCGGCGGCAGGTGGTGGTCGGG
GTGCGTGGGCGCGGGCCGCTGCTTGCGCGCGCACTTGTGCTTGGCGGGCTGGTGCGCGGC
GCCGGGGTGTGCGGGGTGCGCGGGGTGCGCGGGCG
(6035 bp)

- SilkBase 1999-2023 -