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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3879c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_N-glycosylase/DNA_lyase_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003684 F damaged DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008534 F oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0034599 P cellular response to oxidative stress
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.29 TPM:1.26
ORF EntryO_TrvaFAMAMG2891_complete:A_TrvaFAMAMG_TR3879c0_g1_i1
Sequence
(Nucleotide)
GTTTCGTGCTTAATTGCTCCTTTTGAAAGTTATTTCACACTTTTTAACTATTATTTCATA
TAAACACTATGTCTTGGAATAAAATAAAATGTCCGGCTGGTGATCTACAATTACTAGCAA
CTCTATCAGGTGGTCAAAGTTTCAGATGGCACCACAACAAAGAAAATGACGAATGGATAG
GAATATTCTCAAAAACAGTATGGAAACTCAAACAGAATGAAAACTTTTTGTTATATCAAG
TATTAGGCAGCTTATTGAAACCTCCAGAAACCATTCAAACTAATGGAAAAACGAATTTTA
AAAAGTTATTAGAAGACTACTTCAGATTAGATTATGATCTGAATGACCTTTACAAGGATT
GGTCGAATAAGGATGAACTATTTAAATTGGCGTGTCAGCAGTTCTATGGTGTGAGAATGC
TTCGACAAGAACCAGTGGAGAATTTGTTTTCATTTATTTGTAGTCAAAATAATCATATTT
CTAGAATATCAAGTATGGTGGAGAAATTATGTACTCATTATGGTGAAGAAATCTGTAAAC
ATGAAGACATAGTTCACTACTCTTTCCCTGATATTGAAAAGTTGGCATCTCCTAAAGTTG
ATTCGGAACTAAGAGATCTAGGTTTTGGTTACAGAGCAAAGTTCATACAAAAATCTGCTT
CACAAATTGTAGAATGGGGTGGTGCGAAATGGTTTAACAGTTTACAAGACATGAAATATA
AGGATGCCAAATGTGAACTGATGAAATTACATGGTATTGGACCTAAAGTTGCTGACTGCA
TATGCTTGATGTCATTAAATCATCTTGAAGCATTACCAGTGGATACACATGTGTATCAAA
TAGCTGCTCAGAATTATCTACCGCATATACGAGGAAAGAAAAATGTGACGGAAAAAATGT
ATACAGAAATTGGGGATCATTTTAGAATGTTGTATGGTGATATGGCTGGGTGGGCTCATA
CTATTTTATTCTGCTCAGATTTGAAAAAGTTCCAACAAGGGGAGAATGCTGAAACAAATG
AATGTTCAAAACCAAAAAAGAAAAGAAAGAAATGAGAGTTGAAAGTAAAGTTTGTTATGT
GATATTATTAGTTATTTAACATTAAAAGTAATGAATTCATTGAATTCAATTCATTCACCA
CTATAACTTTGGCTGTAGATACTATCCG
(1168 bp)

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