SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3869c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Exportin-5_[Papilio_xuthus]
Ontology
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
Transcript
Level		FPKM:10.18 TPM:9.98
ORF EntryO_TrvaFAMAMG2874_3prime_partial:A_TrvaFAMAMG_TR3869c0_g1_i1
Sequence
(Nucleotide)
GTTTTTGTGATCTATAATTTACATGTGTATAGAGTTTACACCGGTTGGTTGTAGTTGTCA
TGTTTTTAATTAAAAATATAATTTAATGTTTGCAGATTTTAAATGTTAGACAATGAACTA
ATTGTATACTGCATGGATATTAATTCATAACTGTGATACTGGCAGAATGAATGTGGGTCT
GAGCCCAGAGATTTCTGGGGAGGTAGCTCTAATAGCAGATGAACTGAGTCGAGCCGTGGA
ACTGACTCTAAACCCTACTGTATCACAGGAGGCTCGGAGTCAGGCATACAATGCTTGTGA
GAGTTTTAAGGAAAACTCGCCATGGTGTGCTCAAGCTGGGCTGCTGTTGGCCAGCGGCAG
TCAGTACTCTCCTGTTGTCAAACACTGTGGCCTGCAGTTGATGGAACACACTGTTAAATA
CAGATGGACAAGGATAACTCAGGCTGAGAAACTTTTCATTAAAGAAAATGCTATGAAGCT
ACTCTACATGGGTGGATGGGAAATGGGTCATCTGAACGATGCATTAGCTAGAGTAATAGT
AGAGATGATAAAACGTGAATGGCCTCAGCAGTGGCCCACTCTGTTGGCTGAACTAAGTGA
TGCATGCACCAGAGGACATCAACATACACAGATTGTACTGCATGTGTTCCTGAGATTAGT
TGAAGATGTAGCTACTTTACAAACCCTAGAACAGAACCAACGACGAAAAGACATATACCA
AGCTTTGACAAGTAATATGGCCGAGATATTTTCGTTTTTTATGCGTTTAATTGAACTTCA
TGTACAAGAGTTTAGAGAAAAGACTGCCGCTGGAGATTACAACGGCGCCGCCAGCAATGG
ACGAGTTGTGCAGGTAGTATTACTAACATTGACGGGATTTGTGGAGTGGGTGTCCACAAA
TCATGTTGTCATGAACAATGGAAGACTGCTACAGATTTTGTGTATATTGTTACAAGACGA
CGTGTTTCAACTTCCAGCAGCAGAATGTTTGCTACAGATTGTAAATAGGAAAGGATCTAC
GAAGGAGAGAAAACCTCTTATGATATTGTTTAGTGAAGATGCCATATCATGTATACACAG
AGCAGCCATAGCTGCCATCAATGTGACCGACGAAAACCACTATTTGTTCCTAAAAAAATT
AGCTCAGGTGGTAGTAGGCGTGGGTCAGCAGCTGACGTCACTGTGGAGCAACGCTCAGAA
CGTGGAGTCGTGGCTCGGGTTGTTGGTGGAGACGAGCCTGGCGCTAGTGCTGCACCCCTC
GCTGACGTTGGCGCAGCACGCGACGGCGCTGTGGCTGACGTTGCTCAAACACGAGCAGAC
GTCCAAGTTGCCTTGTCTGTTGGCCGCCGTGCCGAGGTGGCTAGTTGCGGCCGCTCCTAA
ACTACTCAAGGTCCAGTACCCGTCGTCTCGTCCGAACGGTACTAACGACGCGGTGGCGTA
CGCGTGCGTCGACTATGATAGCGAACAAGAATTTAATACGTTTTTTAATAAATTACGAAC
TGAGATATTAGATAGTTTTAGGTATTGTATGATGGCGGCCCCCCTAGTCACGTGGTCGTA
TGTAGAGCAATGGACGCAGTCCGCGCTCGATAAACTCAACACATGTCCGCATTCACTCGA
CACACAGCATCCAATATACGTGGAGTGGGAAGCACTTACACAAGCGTTGGATGTGGTTTT
ATCCCGACTGGTGGAGACGGAGCCCCGGCCGAGCGCGGCGGCGGGCCTCGCGCTGCTCCA
GCGGTGTGTGAGCGCGCACCCCGCCGACCCGCTGCTGTTGTCGCTGCTGCTGTCGCTCAT
CTCGGCGCTCTTCGTGTTCCTCAGCTGCGCCTACAGCCAACTGGCAGGTCCGGGTGTAGG
AGCAGCAGGGGCGGAGTTGTTGCCGCGCGTGTTAGATAAGATATTCTCGTCTCTGGTGTA
CGAGGGCGCCACGCCCGACCAACGACGATCCCGCCCCGTCAAGAATGTGCGACGACACGC
GGCCGGGCTCCTTGTTAAATTAGGATCTAAGTACCCGCTGCTCCTGCTGCCGGTGTTCGG
TCGTCTGCATGAGATGTCCCGCGCCGCGCTGTCCCGCCCCGACCTCAGCGTGGTCGAGAG
TGTCACGCTGCAGGAGGCCCTGCTGCTCATAGCCAACCACTTCTGCTGCTACGAGAGACA
GAGTGCGCTTGTTGCACAGGTGGTCGGTGAGATTGGTCCTCGATGGGCAGCACTGAGCTC
CCAGGCGGGAACGGCAGACGCACTCGTCCGACTGATCGGGCTGGACGTGGCGCCTGTCGA
CACTGCACTCAGTGATAACGACGAGCGCGGCTCCTCGCGGCGAGACCTACTACACGGCCT
CACGCTGCTGCTCGGCGTCGTGAAGCGCACGCACGTGCCCGCCGACCCCGACAAGGCGAC
GCGCGGCGGTTTCAGCGGCGGCCTCACCCCCGCCGGCAACCCCGTGTGGCGCAACCCCTG
CGCGCCGCACGTGCTGCCCCTGTTCCCCGGCGCGCTCAGCCTGGGCCGCGCGCTGCACGA
GCTGCACGCGCCCGG
(2535 bp)

- SilkBase 1999-2023 -