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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3846c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PR_domain_zinc_finger_protein_16-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0016235 C aggresome
GO:0016607 C nuclear speck
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0034968 P histone lysine methylation
GO:0042803 F protein homodimerization activity
GO:0043069 P negative regulation of programmed cell death
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0071425 P hematopoietic stem cell proliferation
Transcript
Level		FPKM:0.68 TPM:0.67
ORF EntryO_TrvaFAMAMG2852_5prime_partial:A_TrvaFAMAMG_TR3846c0_g1_i1
Sequence
(Nucleotide)
GGCGACCATCAGTGTCTTCGGAAGATTAGAACGTCAAGCTCTCAACGAGAAGTTAGGTTC
GCAGTCTGTCACTGAAGACGAGGATAGAGAAGATACGGAACCAAGGTGCTCCTTCTGCGA
CGCTCCATGTGCTAATATTGAGCTACTCGATCAGCATCTGATTCAGCGTCACGGCCAGCC
AGCCGGTGCGTTCCAGTGTGCTCTTTGCAACCGCGCTTACAGTTCTCAAGCTCTTCTCCT
GCGCCACCGAGCTCTGGCTCATACTGACATCAGGAAATACCCTTGTGAAAACTGCCCTAA
GGCGTTTACCGATCCTTCCAACCTGCAGCGCCACATCCGCGTGCAGCACGTGGGCGCCCG
CAGCCACGCCTGCCCCGAGTGCGGCAAGACCTTCGCCACTTCCTCCGGTCTCAAGCAGCA
CACGCACATACACTCCAGCGTCAAGCCGTTCCAGTGCAAGGTCTGCTTCAAGGCCTACAC
TCAGTTTTCAAATCTGTGTCGCCACAAACGTATGCACGTCGCCTGTCGAGCCATCGTTGA
ATGCGGCAAGTGTGGCCAATCTTTCGCAACTTACGCTTCTCTTACAAAGCACAAGAGATT
CTGCGATACTGCTACAGCATCTATAAACTTGAGGAGCCAGATGCCACAAGGATTGCCACA
GATCCCACAATTACCAAACGTCGCGATGAATCCTGGGAACAACCCAAATCCGTTCCCAAT
GTACAGGGGTCCAGCCTTGCCATTACATTACAACACTTTTGCGCACTACCCAGCATTGTT
ATCTGCTGCCGCCGCTGCTGCCTACTCACCTGACTTCTTAAACCCATTCTTGAATGTACA
AGGTGCTGCTAGATTGGCAATGGAACATGACATAGCTATGTCAAACGCTAACTTGGTTTC
CAAACAACAGGAAGGTAGAATGTCAGTCAAAAGTATGGACAGCTCCACTTCTCTGGAAGA
TGCGAAAAAGATGAAAGACTTTGACTCAGATTTTAGTAAAAAAGATAATGCTAGTTCCGA
TCGAGCTACGCCCAACAAATATGTCAGGGCCTCAACTAAGATGTCTTCTCCATCAATGGA
TGAAATTTCACCGCCGCACAACCCTTCCATAATGCCGATGCAGACCCCGATCGTTCCGTT
CAATTTCTCAAGGGATGAAATCAAACGGAAATCACCATTTAACTTCTCGTTGAAACTCAA
CAATAATGACGTACCGAACCATAAGCCATCTTCCCCATCTTTACCAAAAGATTTGTCTAA
GATTGTAATTGATGATGATGATAAAATGTCTGAATATTCTGAAACCGAGGAAGACATTAA
AAAAGATGACGCAGACCAGCCTCTCGACTTGTCTGTGACAAAGAAACAGAGTGACAAGGA
ATCCGAGGGAGACGATAATCGTTCCTTTCGCAACTCTGTAAAGTCATACTCCCCACCTGA
GAGTCCCCTTGCAAGGAGCAAGACTCCCGAGAATGACACCACAGACGTAGACGTGGAAGG
TGTAGAACCAAAGCGAGATTCTCCGACACAGATGGTATCGGCGCCTCTTGCTTTCCCCAT
GCCTGTCCACCCACAACACAACAGCATCATTGACGCGATGTACCGCCCCAGATTCCCATC
CTTCCACACATCTGACTCAATTTTAAATGCTCCCCACTCTGCCTACGTTCCAAGCCCGTT
CAATTTTTTATCCCCACTTTTGGGAACGGATGGGCCAGATCGGCAACAGAGCGCTTACGC
CAAGTTCAGGGAACTGAACGCAGGCTCCAGGAAGGGTCGCGACCAGTACGCATGCAAGTT
CTGCGGGAAGGTGTTCCCTCGCAGCGCCAATTTGACGCGACATCTGCGCACTCACACCGG
AGAACAACCCTACAAATGTAAATACTGCGAGCGCTCGTTTTCTATCTCGTCGAACCTCCA
GCGGCATGTCAGGAACATTCACAATAAAGAGCGCCCATTCCGATGTCCATTATGCGACAG
ATGCTTTGGACAGCAAACTAATCTTGACAGACACTTGAAGAAACATGAGGCTGAGGGTGG
AGATTCACCCAGCTCAGCCGACACTGAAAGGGATGACGCTTACTTCGATGACATTCGTTC
CTTCATGGGCAAGGTAACATGTTCTCCCCCACCTCTCGCCATCTCCACATAGCGTAATAG
TAATTCACATTAGCAAGACATTTAACTTAGAAGTATATAAGGATATTTCACCGATAATTA
CTTAGATTTATGGTCAAGCCCCGTCAAGGATTTTTGGTAAGGGCAGAATACATGACATTG
AGTTAATTCAAAAGTTAGAGTAGTACTAAAACATATTTCTTGTAAATACGTCTTATTAAG
GTCAAACAGAATGATTTATTGTTCACATTATTTAAGCTATATTCTCGATTGCGCCACAAA
ATCAGTAATTGTTATTAAATGTATAATGTGACTTAAATTTGTTCCTAGTTCACGTCTCGT
TATTTAAGATTCA
(2473 bp)

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