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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3820c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_mahjong_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008180 C COP9 signalosome
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0030183 P B cell differentiation
GO:0033151 P V(D)J recombination
GO:0035212 P cell competition in a multicellular organism
GO:1990244 F histone kinase activity (H2A-T120 specific)
GO:1990245 P histone H2A-T120 phosphorylation
Transcript
Level		FPKM:16.95 TPM:16.61
ORF EntryO_TrvaFAMAMG2825_5prime_partial:A_TrvaFAMAMG_TR3820c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTGGTAAATTTGAACGTTTATTGGCTAGTCAATTTCGAATTCTATAATATCTCCG
AGATCTAGATCGATGTCTCCTTCTCCGTCGCTATCACTGCTCTGTCGGGCGGCACCCTGT
CTCCTGGGCCTGTTCCTCCTGCGTCTCCTGCGCGGCTGGTTGTCTTCCCTCGAGGACTCG
CCCGAGCTGCCGTCCTCGGCCAGACCCATCACCGCGTTACGGATGAGGTTCGATGCCAAA
TCATCATCATTGTCTGAGCCGGAGTCTGATCCGTCATCGTTTTCTGAACCGGCCATATCT
TCGTCTTCCTCTTCCTCCGCGTCATCGTCGTGATCTCTCTTCCTGCCCACGTCGTATATC
TTGACGCACGACTCCTGCATCTGGTCGTACTCGCCCATGTTCTCGACCACAGATATCTGG
GTTCCGTACCGAGACACGCTCAGAGCGTATATATTCCTTTTTACGTCTATTGTTGCTATA
CTGGAGTAGTCGTAGGGGTCCAATGTTCTGAAGCTGGTGTCGAACTGATGTCTGTCTTCG
GGATCTTGATCAGAAAACACGGCGTACAGAGCTGTGCATGTCGGATTGAATATCACCTCT
GATTTATCTAAAGTTGGCACAGTCCTAAGCAGATGGAATGTCCTTAAGTCCCATACTTCT
GTATTCGATATTACCTCTAATCCGTTCGGATGGAACACTCCGCTATGCGTTTGGTTTAAT
TTGTCGAATTTATGTATTTCCTTGCCTGTGTTCACGTCCCATAATACACCATCAGACAAC
ACAAGTTCATCAGTCGGGTTGAACACGGCTCTGTTCTTCGCGTACTGATTACTTATAGAT
GGAGTCAACGTCATCAGCTCTCTGCCGGTGCGTGTGTCAAATATCGTCGCCGTCTCGCCT
TTCGTTCCTATTATCCTATCGTCGGACATTTTGGAGAACTCGACGTATTCTTCGGCGTCT
AGTTGGAATATCAGTTCAAATTCTTTCATGTTCCATAGAGCGGAGAGTGGTCGCCATGGA
GTGGTAGCGGACGCCAGCAATAATAACCCGTCTCTGCTTGTCTGCATATGATAAATGTAA
GATTCGTGGACTTGATAGGAGTTTTCTTCTGCGCCCGTAAATAAATTGAATACCCTGATA
TCGCCGGACGAGGTCGCCGCTAATAGCTGATGCTGCGTTGGGTGGAAGACTGTGTGCGTG
AAGTACGCGTCGTCGTCCTGTAGCCGCAGCGTGCGTGCGGGCGCGAAGTGTGCGTGCGCT
AGTTTAGTGTCGAGGCGGCGGTGTGTGGCGGCCCCTAGTTCTCTTCTCCAGACTCTCGCG
GCCACGTTACCGCTAGCGCTGACCATGGACCACGCTCCTCTTGGTTCTGGACATTTGTGG
GGCTCAAATAAATTAAACTGCGGGCAGGTAACGACGGGGTTCTTGCATAGCGCGTGCTGG
TTGTACAGATACTCGGTGATGATATTATGTAGCGTCACTCTGTGTTGCTGAGAGCTGCCT
TGTTCCGGACAGACGGACAACTGTTTCTGTAGTGATCGTTTTTGTTCGCACGATTGTATG
GCTGGAACGCCTGGCTGTTGAGTTTGTAGTTTTCTAAGTTTGATGACTGTAGGGATGGGA
CTGCTCTCATCGTTGTGTGATGTGTTCATATCGATGCTGTCTCGGTGCATTGACCCCGCG
CTGCTCGTTCGGGAGACGGACAGACGAGACCTGGCAGGCGTGGAGGGCGTGTAGACGGGG
GGCGGCGGGGGCGGG
(1755 bp)

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