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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3775c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calsyntenin-1_[Papilio_xuthus]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:136.56 TPM:133.80
ORF EntryO_TrvaFAMAMG2784_complete:A_TrvaFAMAMG_TR3775c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTATTTTAAACCAACTTTATTTTTAGCTAAAATATAAT
AATTCATACATCAAAGAAGTTCTAATCGTAAATACAATTATATCGTAATATGTAAAAATA
AATCATGAAAATGAAATATAAAAAAAAGATAAAATAGCTACCTTATAATACTAAAAGTTC
AATAAAAACTGGATTTGTCGCAAACGATTTTTGTGCTTGTAATTTTGAGCTATGTTCAAA
ATAAATCAGATCTGGGGGTATTCATATATCAGGGGAAATGGACAGTGGACGGTTGCCAAG
AGAAAAACATAACGAGGAAACAAACAAACAAAACGAATACAAGAAATATCTTTGTCACAG
AGTATAAACAATAAACACTCCGTGTAATCTGTGTAATATAAAATGACATTTGACAGATGA
GAAACGTCAATAGTTAGTAGTAGTAAGAAGTTAATGAGTTAGAAATTTTAAGAAAATTGG
ATTTAATCGCATCCTTAGTCATAATTTTAGTGGGATTAAATGAGTATCAAGTTTAGTAGA
AGTTATTATTTTCGATGTTCTTTATTCGAATGACATCTGTCACATCTGTCAATTTACATT
CCACAGATTAAACAGTCAAAAATAAGAAAAACATTAAATTCAACTACAAAGACACACCAA
TGATTATGTTTACAATGATTGCTTAGTTTACAGTCGGTGTACTTAAAACAGTTACTACGC
TAATTATGGCAAAACATTGATATGCAAATTCGGGTGAGAGTGAAACGTGTATCTTAGTGT
GGATTAGGGTAAACTACACAATCGACTGCACCTTCGTAAAGGACCTTTTTAAATCCGTTG
CTCAATTTTCGCCTAAAATTAAAATTTTAAGACATTGCTAGTAAAAAGTGCAACACCAAT
TGTATAGTTTACCTTAAAAATGAAGTGTCAATCGTGCATAATGTTTGACCATAGAGTATA
AACTGCAAAAAATCGTGTATCTTTTGTACTACATCCAGCAATCCTGATCTTACTCATGGG
GTTTTATTTCGGTTCATCTCAAGCGATCCACGGTGAGAGAATGATAGGTACTTAACTACA
CTTAGATCTAAGCGACGCGTCTTGCCATCCCCTTTATACGTCACATTCTAACATAGCTTA
GTTCCTAATTGTTAGTAAAAATCCCTTAACGCATTCAAAATATATATATAGATATAGCTG
ATCCTAAACCAATCTGTATATGTGTATATCATACATCTATAGTTTCATATATCTGTGCTA
ATATACATTTAAGCCGATTTCGTCTTCAAGCTCGAAGGATTTAATGTTTGGACATTTTTA
ATTCTACCGGAGAAGCTTTGTACCAAAAAATAGTGTTGTACTTAAATGCGGTTCAAAATG
GCGGATCACACAAGATGGCGTCTTTTGTACAATAACCTACGATGGAAACGAAACATTAAA
TGCTATTACGTGAAAATATCAGTGAAGCGTTTTATTATTTATAGTGTTCAATAGCTTATT
TCTAAGTCTTACATCCGACTCCATATGAAATTACAACAACTACATTTATTACATACATTT
TCACGACTTAATAGTTAAACGAATCGAAAGTGGACAAAGAACGAGCGCTATGGAAAGAAC
TACAAAAGCAAGCGAAACCATTACGTATAATTTGATATGATCATTTTATTGAAAACCTTA
TAAATTAAAACGTATTTTTAGATTGAGATATTTGCCCGAAATTAAGTAGTTTTTAATCTT
TGTCACGAACACGTCAAAAATGGCACAGATTATACATGAAAATATTTTTATTGACAAAGG
AATCCATTGACATACTGCCAAATATTCGTGCACATACCACAATCTAACATACAAAGTCTT
GTGCCACGCGTTTGTGCAAAAGCTTTGTTTACACTTATCATAGGGACATAGATTATAAAT
CAATTCCGTAACTATTTTTCACGTTAGAAAATGACGAATTAATATGGCGAAAAATCTATG
AACGCATTCATCTTTTTAGATTTTGGTCGTCAATAATGCGTTGGAATTCAATATTGAATA
ATATTGTGTTTAAGACGCCATATTGAAACGTCACAGTATACAATGTTAGAGCGAGTCGGA
AATAGAAGGACGGCGGAGTGCACGCGGGTGCGAGCGAGAAGGGAGATATAGGAGTGCGTT
AAGTACTGCCGCTGTTTTCATAGGGACATTACATTGTGCTGTTGTCCCATTCTAGCTGGC
TAATGTTCCTGTACTTGTGTTGCTTGTCTGGCATCACTTCATCATCTTCATCGGAGGACT
CATGGTGATCGGAGTCCGTGTCGGAACAGGATTCACCGTCGGAGCTGTCTGCTGCGTTCA
CATGTGTTCCGCAAGTAGGTGCGCTCTCCTCCATAGGGTTAACAGTGATAGTAAGAGCGG
AGTCATCCCACGCCATCTCGGTGTCGGCGAGGCGGGCGCGGGGTGCTGCGGGGCGCGGGG
AGCGACGGCTGCGGGCCACGCCCACTCCCGCCGCAAGCACTACCACTCCTACAGCTACTA
CGCCGATAAGGAGTGCCACGTGATTGGCAGTCTGTTGTTCTGGACGCAGGTCGATGAGGC
GCGGTGCGGGCACGTCGGCTGTGTGCGCGTCGCGCTGAGCGTGCGCGGCGTACACACGTG
GCGCGACCACGTGACCGTGACCATGGCCGTGTTCAGGCACAGAGTCCCTGGCGACGTCAG
CCTTGTCGGCAATACCACTCGGCATTTCACGAGACGCTACTTCATTCACAGCGGACATGT
GAGGGTGGACTACTGTTAAAGTTTGTACGTATTCGTTGCTTGTGAATCTTCCATTAAGTT
CGGAGCAGGTCAGTTTGAAGACACGGTTTAAGTAGTACGCAGGCTTCTTGTTGCTATATT
CGATTTCGCGAAGCACCTTCTGATAGTTGTGCACAGTATCAGCGCCGGTCAGTATAACTC
CGTCCCGGGTGACGGTCGCGCGGATGTCGTACCGCAGAGGAAGGTCTGCTGCCACGCGCA
GGGACAGCGCTTCGTGATCCGGGTTTAAGGCTGGGTACACTGATACCACGCATGAGTCGA
GTTGTTGCTTCTCTTCAGCCAAAGGATGATTAGTAGGTGCCCTAACAGACACTCCAAGGT
CAGGGAACACGGTGAGTCCAGCTCTGAAATGCGCGTAATCTCTCGCCACGTCCGCGCTAC
CGTTCAACAGGATGCTCGGTGTCTGAGGAGCCAGGACCATGATGTAGGACTCCGCTGGAC
GGGCCTTGATGATACGGCCGTTGTCGCAAGTGATGGTAGTAGCAACGTGTACGTTTCTCC
TGCCGGGAGTGGGGAAGGCTCGTGCGTCACCGTAAGCGACGCGACGCAGTAATGTTTCAA
CGTCAGCCACGCCGTCACCTTCCACTGACACCGATTTCAAATATAGATCAGGAGCTAGAC
TGAGTCCCTCCCTGCACCGAGCGAGGCACGACAAAGCGTGAGATGGTTGAGCCGCTCCCC
GTAACACTCCTAGACCGGCCAGCCAGCCGTGCAAGTGATGTTTCATGTCCTTTTCAGTTC
CTTGCCAACAAGCACCAACAACAAGAGTAGTGTTAACACCATGTGCGGGATGCAGGGGCC
AGTCATCAATGACTTCGGGTCCTTTACCATCCACCGAGCGGTACGGCTCGCCGTCTATAA
ACAACTCGACGTTCGGGAAACGGATGTTGAGAGCGTAGTGATGCCATTCGTTGTCGCAAA
CCTCTGGAATCTTCCACCTCCATTCAGCGGGACGGAAGATGTTGAGGTCACCTTCTCCGA
AGTCGCGACGCAGAAGCAGGATCAAACGACAATTCCTTACGAACAGGGCGTAGTGGTGGC
GGTTCATTTTATGGTCATCAGCAAGACACAGGACATGTTCCTTCTTGTGTTTGTCTCCGT
CAGCGGGCGCTGCGTGACGCATCCACGTGGATATTGAGAAGGTACTTGTCATGGAGTGCG
GGAGGATTGTCTCTGGTACAATGGCGGAGGTCGTTTCGCCGTCAAATTCGAACATCTGCT
CGCCATCACGACCTGAGTCGGGTTTCAGAGATTTTGCCCATTCGTTGCCAGCACCAGGGC
TTGGTAGTAAGTCGATCGTCTTTGGGTCCAGCCCACAAATAGTGCGTTGAGAATGTAGTG
CATAAGTGTCTCTGTCACAGCCACTGCCTACTCTTGATGCTTGTAAAGAAACCGCAGCCT
GGATCCTGGTGACTCCAGGGCAACGTTCATCAGAAGAACAGGTCTCAAGGCGAGCTGCAG
GGAACAAGGCCAAAGGACCTGTTCCTGGAGCGTAGTCCACGCGTTCTGCTACACCTTTCC
AGCCAGCCTTGCAGGGTTTGTTGACTTTGATGGTGACCATGACAGGAGCCGACTGCATCA
TCCCACAATCGTAGGCCACTACCGACAGTATGTGGTTGTGGGATTTCTCGTAATCTAGAG
GTTCCGTGTTGCTGATTACACCTTCAACGTTAATAGTAAACGGCTGACTCCTATCCGTCA
AGATCTCGTATTTGCACACATCTCCATACCGCGGTGTGCAGTCTTTATCAATAGCTTCCA
CACGTAGAATCTCGTCGTATATGCGACCTTCGTCCACGGTTTTCACGTATGCTGACTGGC
TGAAGACTGGGGCGAATTCGTTTACATCTGTCACTGTTATGTGGACTGGGACGGTGTTGG
AATAAGAGCCATCACATCCAACAGCGGCGATGTCGAACTTGTAGTTGCGACGTTTCTCGC
AATTCAGCGGGAATCGGACACGGAGACGTGCTTCGTTTTCGTCTATCACCATTATCTCGA
AGGGGGCTTCTCCATGATGCTTGTTATTCAGTATCAGGAAAGAACAGAGCGGTCCGCGAG
CCCTGATTGGAGGAGTCACTTCCACCAGGGTCTCGTTCTCCTTGATCAGCCCATGATAAC
CTTCATCAGGCTCGTCCAATTCCAGGTATGGAATGTCTTCATTGTTGTTTCCCTCGGCCC
CGTACACCGATGCCAGGAAAACTCCGACGCACAAAACGGTCAAGAACCTCACAATCATTT
TGAATGATTATTATCCAACACTGCTCTCACAGCTCAGTCGAAAAATAATATTTTTAAACA
CACGACATAATCAAACCGACGACACTCGCGCTGCTCAGCAGCGATCAACCCTTCGCAAAT
GGCGGCGTATGACGGATGTGTTCATCGATTGCACTCAG
(5198 bp)

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